Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15487
Subject:
NR_163905.1
Aligned Length:
3116
Identities:
160
Gaps:
2930

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGTCGCTAAGGAGCGACGGGCTGTCGGCCAGACCCCGAGTTCTCGGTGCGCTCAGCGGCCGCCGACGCTAGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCCGCGCTCCGCCCCCGCTACCATGAGGCCCCGGAAAGCCTTCCTGCTCCTGCTGCTCTTGGGGCTGGTGCAG  148

Query    1  -------------------------------------------------------------------ATGCAGT  7
                                                                               |||||.|
Sbjct  149  CTGCTGGCCGTGGCGGGTGCCGAGGGCCCGGACGAGGATGAAGTGTCACTCTGTCACCCAGGCTGGAATGCAAT  222

Query    8  GGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGC  81
            |||||.|||||.||||||||.|||||||..|||||||||||||||||||||..||||||.||||||.|||||||
Sbjct  223  GGCGCGATCTCGGCTCACTGTAACCTCCGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCCGAGTAGC  296

Query   82  TGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTG  155
            |||||.||||||||.|||||||.|..|.|..|||||||||||||||||||.|||||..||||||||||.|.|||
Sbjct  297  TGGGACTACAGGCGCGTGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGATTGGGTTTCACCATATTG  370

Query  156  GCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------------------------  186
            |||||||||||||.||||||||||||||..|                                           
Sbjct  371  GCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAAGTGT  444

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  445  GAGCCACCGCGCCCGGCCAGGAAAGTTTTAAGGAGAGTCACCACCAGCTTTGTAACCAGTCTGGGTGTTTTCCA  518

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  519  CTCAGATTCTTCTAACAGAGAAAATGCCATTGAGGATGAAGAGGAGGAGGAGGAGGAAGATGATGATGAGGAAG  592

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  593  AAGACGACTTGGAAGTTAAGGAAGAAAATGGAGTCTTGGTCCTAAATGATGCAAACTTTGATAATTTTGTGGCT  666

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  667  GACAAAGACACAGTGCTGCTGGAGTTTTATGCTCCATGGTGTGGACATTGCAAGCAGTTTGCTCCGGAATATGA  740

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  741  AAAAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCCTGTTGCCAAGATCGATGCAACCTCAGCGTCTG  814

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  815  TGCTGGCCAGCAGGTTTGATGTGAGTGGCTACCCCACCATCAAGATCCTTAAGAAGGGGCAGGCTGTAGACTAC  888

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  889  GAGGGCTCCAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGAGAAGTCTCCCAGCCCGACTGGACGCCTCCACC  962

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  963  AGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGTTGTGAATGATGCAGATATCATTCTGGTGGAGT  1036

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1037  TTTATGCCCCATGGTGTGGACACTGCAAGAAACTTGCCCCCGAGTATGAGAAGGCCGCCAAGGAGCTCAGCAAG  1110

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1111  CGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACCTGGCCAAGAGGTTTGATGTCTC  1184

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1185  TGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTATGACTACAACGGCCCACGAGAAAAATATGGAA  1258

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1259  TCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGACCCTGAAGCAGGTCCAGGAGTTC  1332

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1333  CTGAAGGATGGAGACGATGTCATCATCATCGGGGTCTTTAAGGGGGAGAGTGACCCAGCCTACCAGCAATACCA  1406

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1407  GGATGCCGCTAACAACCTGAGAGAAGATTACAAATTTCACCACACTTTCAGCACAGAAATAGCAAAGTTCTTGA  1480

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1481  AAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATG  1554

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1555  ATGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCTGGTTGG  1628

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1629  CCACCGCAAGGTGTCAAACGATGCTAAGCGCTACACCAGGCGCCCCCTGGTGGTCGTCTACTACAGTGTGGACT  1702

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1703  TCAGCTTTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAG  1776

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1777  TACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAGGTGAAGGACCTGGGGCTCAGCGAGAGTGGGGA  1850

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1851  GGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTTCGCCATGGAGCCAGAGGAGTTTGACTCTGACA  1924

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1925  CCCTCCGCGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGAAGCCAGTCATCAAATCCCAGCCAGTGCCCAAG  1998

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1999  AACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCATTGTGATGGACCCCAAGAAGGACGT  2072

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2073  CCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCCGTGTACAACAGCCTGGCCAAGA  2146

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2147  AGTACAAGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACGCCACTGCCAACGACGTCCCCAGCGACCGCTAT  2220

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2221  AAGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGGGACAAAAAGAACCCAGTTAAATTTGAGGGTGG  2294

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2295  AGACAGAGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACATGCCACAAAACTGAGCAGGACCAAGGAAGAGC  2368

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2369  TTTGAAGGCCTGAGGTCTGCGGAAGGTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGC  2442

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2443  CGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTTTTTTTTTTTTTTTAATTTTTTATACTTTGGTGTTTCA  2516

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2517  CTTCATGCTCTGAATACTGAATAACCATGAATGACTGAATAGTTTAGTCCAGATTTTTACAGAGGATACATCTA  2590

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2591  TTTTTATCATTATTTGGGGTTTGAAAAATTTTTTTTTACACCTTCTAATTTCTTTATTTCTCAAAGCAGATAAT  2664

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2665  TCTTCTGTGTGAAAATGTTTTCTTTTTTTAATTTAAGGTTTAAAATTCCTTTTCCAAATCATGTTGATTTTGCT  2738

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2739  CTTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCTGATTGCTTCCTGT  2812

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2813  TGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGC  2886

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2887  CTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGGCATGATCCAGGGTCCCCCAGGGTGGGCTCAGCTCCAGGGAG  2960

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2961  AGGCCACCCACGTGGCAGCCCCACCTCTTGAGAGCCCCCAGTGCCGGAGCAGAAAGGACCCTGGACCCAGAGGC  3034

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3035  AGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTGGCAATGGAATAAAACACGATTAAAAACGTTAAGAA  3108

Query  187  --------  186
                    
Sbjct 3109  CTGCGTTA  3116

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