Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- XR_002957252.1
- Aligned Length:
- 2663
- Identities:
- 161
- Gaps:
- 2481
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGCACGCCGCGCGGAGGACGAAGAGGCTGCACGCACAGCCGCTGCCGGGGGTCGGGGCCAAGTGCGCGCCTCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGGACGAAGAGGCTGGCGTGCCCGGTGGCTCGGCTAGCTCCCGGGTCCCGGCCCCGCCTGGAGGATGCGGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGGGGGAATGGGAGCGGCCGGACCTCCCAGCCTGACAGTGCATCAAGAGCTTTGCGGAGCCTACAGCCCGGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACGACTGAGGCCCTCCCGCTGGCGAGCTGGCCGAGGGCTCGTCCCTCTCCAGCTAAAGCGCCAGCTTACGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TACAGCCAAACTGCCGGCTCTCATCGGCTGTGGGAGCAGGAGGCCCCCAGGGGTAAATCCCGGAGCCTCGTCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGAAGCCTGGCGCTTGTGTCTCAGAAGGTGCGGGACCCACAGGGACACTTGAATCAGCAGGCTCACGACCCCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCCCCCTGCCCCCGCCTGTGTTTGCCCTGGACCTCCAGCTAGGGCTGACCACTAATTCTGTCATGTGACCCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGTGCAGGTAGCTCCCCCAAGACCAAGCCCAAGGCGCGTCCGTGTGGAGGCTGGGGCTGACGCACCCCCACCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGGCCTCATCCCCAAAGGAGGATGCTCCACTGCAGGGGGCGGAGTCTTCTCCAGATGGAGAAAGACTTTTTTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTTTCTCTGAATTCGTCTTAAATTAGGAAATCATGTGGGAATTGGAAAAGATTGGAAATTCTGACTTGTTTCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGCTCTGAAGAAACAGGAAGAGAAAAGTGAAAATAGAGTTAGCACCCCGCCCACTCATTTCAGTTTCTCCAGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCTGGCCCTGATTAGAAAAGTGTTTACTTTTGGCAGGGGGCGGGGGAGGCCGACTTCAGGTGACAGAATGGAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAATTAAAATCTTTGGTTAATGATATACAATTATCATTGAACCTTGCATGGATCCTCTTCTTAAAATTCATGTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TATTTATAACTTTTAAATTAATACGATAAACACCCATGTACCCATTGCAAAACTCAAGGGGCCACCACCATCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAATTCTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTTATTTATTTATTTATTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTGAGACACGGTCTGTCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAATCTCTGCTCACTGCAGCCTCTACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCTGGGCTCAAGCAATCCTCCCACTTCAGCCTCTTGCATAGCTGGGACTACGGGAGCACACCACCATGCCCGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTAAGTTTTTGTATTTTTTGTAAAGAAGTGGTTTAACCTTGTTGTCCAGGCTAGTCTTGAACTCCTGAGCTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTTCCTCCCCGCTTGGCCTCACAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCTGGGCCAGAATTCTGTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTTTTAAATTAATTAATTAATTAATTTATTGTAAATAGAGATGGGTCTCACTGTGTTGCCCAGGCTGGTCTCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AACTCCTGGGCTCAAGCGATCCTCCCACCTCAGCCTCCCAAAGTGGGATTACAGGCATGAGCCACCACACCTGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCCAGAATTCTGTATTTTAAAGAAAAAAAAAGTTATATCTGCATGCCTACACAATATATCTTTTGGTTTTCCTT 1628
Query 1 -------------------------------------------------------------ATGCAGTGGCGCC 13
||||||||| |
Sbjct 1629 AGTTTTGAACTTTTTTTTTTTTTTTTTTGAGACAAAGTCTCACTCTGTCGCGCAGGCTGGAATGCAGTGG---C 1699
Query 14 ATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGAT 87
|| ||.|||.|||||||||||...||||.|||||||||||||||||.||||||.||||||||||||||||||||
Sbjct 1700 AT-TCTGCTTACTGCAACCTCTGCCTCCTAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGAT 1772
Query 88 TACAGGCGTGTGCCACTACACTCAACTAATTTTTGTA--TTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCA 159
||.|||.|....||||.||.|.||.|||||||||||| |||||||.|||||||||||||||||.|||||||||
Sbjct 1773 TAAAGGGGCCAACCACCACGCCCAGCTAATTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCA 1846
Query 160 GGCTGGTCTCGAACTCCTGACCTCAAG----------------------------------------------- 186
|||||||||||||||||||||||||.|
Sbjct 1847 GGCTGGTCTCGAACTCCTGACCTCAGGTGATTCGCCAGCCTCTGCCTCCCAAAGTGCTGAGATTACAGGTGTGA 1920
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1921 GCCACCGCACCCAGCCAGTTTTGAACTTTTATGAAGAGGGCATCATATGATTTGTTGTCCTTTGTTACTTGCTT 1994
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1995 TTTTCACTCAACCTGTTACTATGATTCATGTTTCACAGTTAATTCACTTTTTCACTGCTGTATACTATTTTGTT 2068
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2069 GTGTAAATATACCACAGTTTGTTTATTCATCCTGAAGATAGGCATTTTTATTTTTATTTTTTTGAGATGGAGTT 2142
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2143 CCTCTCTTGTGGCCCAGGCTGGAGTGCAATAGCACCATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAG 2216
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2217 TGATTCTCCTGCCTTAGCCTCCTGAGTAGCTAGGATTACAGATTTATAGGAGCATTGTGACTGGACCAAGGACA 2290
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2291 AAGAAGTTCCCAACCTCCTCAGACCCTCGCTGCTGCCCAGATGTCTGCCATGGGGTGGCCATCATCGAATCCAC 2364
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2365 TGAGGGCGCAAATAGAACAAAAAGGTGAAGAAAAGGTGAATTCTCTCCTTTCTTGAGCTGGGACATCCAACTTC 2438
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2439 TCAGACATCAGAGCTCCTGGAGGCCTTCAGACTCCGAGACATTACACCATTGGCTCACCTGGTCCTCAGGTCTT 2512
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2513 TGGACTTGGAATGAATTACACCATTGGCTTTCCAGGTCTTCCAGCTTGCAGATGGCAGATTGTGGGACTTTTCA 2586
Query 187 ------------------------------------------------------------------------- 186
Sbjct 2587 GCCTCCATAACTTTGTCATCCAATTCCCATAATAAATCGCCTCTTATATCTGTATCTGTTTGGTTCTGTTCTG 2659
