Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15681
- Subject:
- XM_011530577.2
- Aligned Length:
- 3819
- Identities:
- 836
- Gaps:
- 2955
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGAATCTGCTCACTGAGAAGTGTATATCAAGCCACAATTTCCATCAAAAAGTGATTAAGCAGAGAATGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAAGAAGGTTGATTCCAGGTATTTTAAGGATGGTGCAGTTAAGAAACCTTATTCTGCAAAGACACTGTCCAACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAAGTCTTCTGCATCCTTTGGGATCCGGAGGGAGTTACCTAGTACCAGTCATCTAGTGCAGTATCGTGGCACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATACTTGTACCCGACAGGGCCGGTTAAGAGAACTGCGCATCAGATTTTACTATGAGCAGCGATTACTACGGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTCTTCGAAGAATGGAAAGAGGAGTGGTGGGTTTTCCAGCACGAGTGGAAACTCTGTGTTCGAGCTGACTGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTACAGGTATTACCTGTACAACCTGATGTTCCAGACGTGGAAGACCTATGTGCGTCAGCAGCAGGAGATGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACAAGTACATTAGAGCCGAGGTTCATGATGCAAAGCAAAAGATGCGACAGGCCTGGAAGTCCTGGTTGATCTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGGTTGTTCGTAGGACCAAACTTCAGATGCAGACTACAGCTCTGGAGTTTAGGCAACGGATTATCTTACGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGTGGTGGAGCACGTGGAGGCAGCGACTAGGACAGGTCCGTGTGAGCCGTGCCCTCCATGCCTCTGCTTTGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACAGGGCCCTGAGCCTCCAGGTGCAGGCTTGGTCACAGTGGCGGGAACAGCTCCTGTATGTCCAGAAGGAGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAAAAGGTTGTCTCTGCAGTGAAACATCATCAGCACTGGCAAAAACGGAGATTTCTAAAGGCCTGGCTTGAAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCTGCAAGTCCGCAGAGTGAAGAGACAGCAGAATGAGATGGCTGAGCGATTCCATCATGTCACTGTGCTCCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATATACTTCTGTGACTGGCAGCAGGCCTGGGAGCGGAGGGAGAGCTTGTACGCTCACCATGCCCAGGTGGAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTGGCCAGGAAGATGGCCCTGCGGCGCGCCTTTACTCACTGGAAACACTACATGCTGCTGTGTGCAGAAGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGCCCAGTTTGAGATGGCAGAAGAGCACCACAGGCACAGCCAGCTGTATTTTTGCTTTAGAGCCCTAAAAGAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATGTGACCCACGCTCATCTCCAGCAAATAAGAAGGAATCTTGCTCACCAGCAGCATGGTGTCACGCTGCTGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGGTTCTGGAACCTCTGGCGGTCTCAGATTGAGCAGAAAAAGGAAAGAGAGCTGCTCCCCTTACTGCATGCTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTGGGACCACTACAGAATAGCACTGCTGTGCAAATGTATCGAATTGTGGCTACAGTATACTCAGAAGAGGCGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TACAAGCAGCTGCTACAGGCCAGAGCGGATGGTCATTTCCAGCAGAGAGCCCTGCCTGCTGCCTTCCACACATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAACAGACTCTGGCGATGGCGCCACCAGGAAAATGTCCTCAGTGCAAGAGCAACACGTTTCCACAGGGAGACAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAGAGAAGCAAGTATTTTCTCTCTGGAGGCAGAAGATGTTTCAGCATCGAGAAAACCGCCTGGCAGAGAGAATG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCCATCCTTCACGCAGAGCGACAGCTTCTGTATAGGTCTTGGTTCATGTGGCACCAGCAGGCAGCAGCACGTCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCAGGAGCAGGAGTGGCAAACAGTGGCCTGTGCCCACCACCGCCACGGGCGGCTCAAGAAAGCTTTCTGCCTCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGAGGGAAAGTGCCCAAGGGCTCAGAACAGAGAGGACGGGCAGGGTGCGGGCAGCAGAATTCCACATGGCCCAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCCTGCGTTGGGCCTGGAGCCAGTGGAGGGAGTGCCTGGCCCTGCGGGGAGCGGAGCGGCAGAAGCTGATGCG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCAGACCTGCACCACCAGCACAGCGTGCTGCACAGGGCGCTGCAGGCATGGGTGACTTACCAGGGCAGGGTGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAAGCATCCTCCGGGAGGTGGCAGCCAGGGAGAGCCAGCACAACAGGCAGCTGCTGCGCGGGGCATTACGTCGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGGAAAGAGAACACCATGGCCCGAGTGGATGAAGCCAAAAAAACCTTTCAAGCAAGTACTCATTACAGAAGGAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATATGTTCCAAGGTCCTGGTCCAGTGGCGGGAAGCTGTGTCAGTGCAGATGTATTACCGACAGCAGGAGGACT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTGCCATCTGGGAGGCCCAGAAGGTGCTGGACAGGGGCTGTCTGCGGACCTGGTTTCAGCGCTGGTGGGACTGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGCCGGAGGTCAGCCCAGCAGAGACTGCAGCTGGAGAGGGCAGTGCAACACCACCACCGGCAGCTGCTGCTGGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGGGCTGGCCCGGTGGAAGACGCACCATCTGCAGTGTGTCAGGAAGAGGCTCCTGCACAGGCAGAGCACCCAAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGCTGGCACAGAGACTCAGCCGGACCTGCTTCCGCCAGTGGAGACAACAGGCACATCAGCTTCCTTCCGTCTGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGTCTGCATAAGAACAGTTACTTCAAGCTGGCAGCCAGGAGGCAGGAGCAGCGGGCGACAGTGCGGGCCCTGTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTTCTGGGCCTTCTCGCTGCAGGCAAAGGTGTGGGCCACGTGGCTGGCCTTTGTACTGGAAAGGAGGAGAAAGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGGCGCGGCTGCAGTGGGCGCTCCAGGCCTACCAGGGGCAGCTCCTCCAGGAGGGTGCCACGCGGCTCCTGCGC 2664
Query 1 ---------------ATGGCC---------------CAGGCCCACC-------CCA----GCTTAC-------- 25
|.|||| ||||||||.| ||| |||.||
Sbjct 2665 TTTGCAGCCAGCATGAAGGCCTCCCGGCAGCAGCTGCAGGCCCAGCAGCAGGTCCAGGCGGCTCACAGTCTCCA 2738
Query 26 ----------------------------------------TTGCTGACCTTG--------GCCTC-GCCTTTCC 50
.|||||..|..| ||||| ||| ||
Sbjct 2739 TCGTGCCGTCCGCCGCTGTGCCACGCTCTGGAAACAGAAAGTGCTGGGCCGGGGCGGGAAGCCTCAGCC---CC 2809
Query 51 TGAC----------------------------TTTCA--GTCTCCCTATAAA----ATTG-------------- 76
||.| |||.| |||.||.|.|.|| ||||
Sbjct 2810 TGGCAGCCATCGCACCCAGCAGGAAAGTGACGTTTGAGGGTCCCCTTCTCAACCGCATTGCTGCTGGGGCTGGG 2883
Query 77 ------------GAGATC------CCACAGAGATCTCAGACCCCCCT-GCAGCCCCTGGTCAGCC------CAG 125
||||.| ||||||...||||.| ||.|| |.|| |.||||.|.||| |.|
Sbjct 2884 GATGGCACCCTTGAGACCAAGAGGCCACAGGCTTCTCGG---CCTCTGGGAG-CTCTGGGCCGCCTGGCTGCTG 2953
Query 126 GGGAACAGACCCCATGTTTCTTTCC----AG--CAACACTGCCCACTCAGCGAGGAAGCAGCCGCGACGCCCAC 193
.||| .|||||.| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct 2954 AGGA----GCCCCACG-------CCCTGGAGCTCAACACTGCCCACTCAGCGAGGAAGCAGCCGCGACGCCCAC 3016
Query 194 ACTTCCTGTTGGAGCCTGCGCAGAGCCAGA---------GGCCTCAGAAGCCACAGGAACATGGCCTAGGCATG 258
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3017 ACTTCCTGTTGGAGCCTGCGCAGAGCCAGAGGTCCCTGGGGCCTCAGAAGCCACAGGAACATGGCCTAGGCATG 3090
Query 259 GCTCAGCCAGCAGCCCCCTCCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGACAGCACTGGTCCCACACAGCCC 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3091 GCTCAGCCAGCAGCCCCCTCCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGACAGCACTGGTCCCACACAGCCC 3164
Query 333 CCTGCCTGGGGCCCTGTCAAGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAAGCACAGGCCCGGAGCTGCTGC 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3165 CCTGCCTGGGGCCCTGTCAAGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAAGCACAGGCCCGGAGCTGCTGC 3238
Query 407 TGCTGCCTCTTTCCTCCTTCATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTGTCAGCACAGCGGGCTACTCCT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239 TGCTGCCTCTTTCCTCCTTCATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTGTCAGCACAGCGGGCTACTCCT 3312
Query 481 AGGGATAAGCCCCCGGTCCCCTCATCCCTGGCCAGTGTCCCTGACCCCCATCTACTCCTTCCTGGGGACTTCTC 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3313 AGGGATAAGCCCCCGGTCCCCTCATCCCTGGCCAGTGTCCCTGACCCCCATCTACTCCTTCCTGGGGACTTCTC 3386
Query 555 AGCCACCAGGGCTGGGCCTGGACTTTCAACTGCAGGCAGCCTGGACCTTGAGGCTGAACTTGAGGAGATCCAGC 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3387 AGCCACCAGGGCTGGGCCTGGACTTTCAACTGCAGGCAGCCTGGACCTTGAGGCTGAACTTGAGGAGATCCAGC 3460
Query 629 AGCAACTACTGCACTACCAGACCACCAAGCAGAACCTCTGGTCCTGTCGGCGGCAAGCGAGCAGCCTGCGCAGG 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3461 AGCAACTACTGCACTACCAGACCACCAAGCAGAACCTCTGGTCCTGTCGGCGGCAAGCGAGCAGCCTGCGCAGG 3534
Query 703 TGGCTGGAGCTGAACAGAGAGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCAGCAGGTGCAGAAAGAGCTGGA 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3535 TGGCTGGAGCTGAACAGAGAGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCAGCAGGTGCAGAAAGAGCTGGA 3608
Query 777 A------------------------------------------------------------------------- 777
|
Sbjct 3609 ACAGGTGAGGCCCCAGGCCATCCCCAGGTGTCCCTGGGGACGCCCCGGGCTGTGCTCCCTCTCAGCCCTGCCTG 3682
Query 778 --------------CAGGTGGAAATGCAGATCCAGCTGCTGGCAGAGGAGCTCCAGGCTCAGCGCCAGCCCATT 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3683 TCCCTCCATGGCCCCAGGTGGAAATGCAGATCCAGCTGCTGGCAGAGGAGCTCCAGGCTCAGCGCCAGCCCATT 3756
Query 838 GGCGCCTGCGTTGCCCGCATCCAGGCCCTGCGGCAGGCCCTGTGC 882
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3757 GGCGCCTGCGTTGCCCGCATCCAGGCCCTGCGGCAGGCCCTGTGC 3801
