Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15681
- Subject:
- XM_017029140.1
- Aligned Length:
- 3726
- Identities:
- 836
- Gaps:
- 2862
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGAATCTGCTCACTGAGAAGTGTATATCAAGCCACAATTTCCATCAAAAAGTGATTAAGCAGAGAATGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAAGAAGGTTGATTCCAGGTATTTTAAGGATGGTGCAGTTAAGAAACCTTATTCTGCAAAGACACTGTCCAACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAAGTCTTCTGCATCCTTTGGGATCCGGAGGGAGTTACCTAGTACCAGTCATCTAGTGCAGTATCGTGGCACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATACTTGTACCCGACAGGGCCGGTTAAGAGAACTGCGCATCAGATTTTACTATGAGCAGCGATTACTACGGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTCTTCGAAGAATGGAAAGAGGAGTGGTGGGTTTTCCAGCACGAGTGGAAACTCTGTGTTCGAGCTGACTGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTACAGGTATTACCTGTACAACCTGATGTTCCAGACGTGGAAGACCTATGTGCGTCAGCAGCAGGAGATGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACAAGTACATTAGAGCCGAGGTTCATGATGCAAAGCAAAAGATGCGACAGGCCTGGAAGTCCTGGTTGATCTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGGTTGTTCGTAGGACCAAACTTCAGATGCAGACTACAGCTCTGGAGTTTAGGCAACGGATTATCTTACGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGTGGTGGAGCACGTGGAGGCAGCGACTAGGACAGGTCCGTGTGAGCCGTGCCCTCCATGCCTCTGCTTTGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACAGGGCCCTGAGCCTCCAGGTGCAGGCTTGGTCACAGTGGCGGGAACAGCTCCTGTATGTCCAGAAGGAGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAAAAGGTTGTCTCTGCAGTGAAACATCATCAGCACTGGCAAAAACGGAGATTTCTAAAGGCCTGGCTTGAAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCTGCAAGTCCGCAGAGTGAAGAGACAGCAGAATGAGATGGCTGAGCGATTCCATCATGTCACTGTGCTCCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATATACTTCTGTGACTGGCAGCAGGCCTGGGAGCGGAGGGAGAGCTTGTACGCTCACCATGCCCAGGTGGAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTGGCCAGGAAGATGGCCCTGCGGCGCGCCTTTACTCACTGGAAACACTACATGCTGCTGTGTGCAGAAGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGCCCAGTTTGAGATGGCAGAAGAGCACCACAGGCACAGCCAGCTGCTGCTGCACAGGTTCTGGAACCTCTGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CGGTCTCAGATTGAGCAGAAAAAGGAAAGAGAGCTGCTCCCCTTACTGCATGCTGCCTGGGACCACTACAGAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGCACTGCTGTGCAAATGTATCGAATTGTGGCTACAGTATACTCAGAAGAGGCGGTACAAGCAGCTGCTACAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCAGAGCGGATGGTCATTTCCAGCAGAGAGCCCTGCCTGCTGCCTTCCACACATGGAACAGACTCTGGCGATGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CGCCACCAGGAAAATGTCCTCAGTGCAAGAGCAACACGTTTCCACAGGGAGACATTAGAGAAGCAAGTATTTTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCTCTGGAGGCAGAAGATGTTTCAGCATCGAGAAAACCGCCTGGCAGAGAGAATGGCCATCCTTCACGCAGAGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GACAGCTTCTGTATAGGTCTTGGTTCATGTGGCACCAGCAGGCAGCAGCACGTCACCAGGAGCAGGAGTGGCAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACAGTGGCCTGTGCCCACCACCGCCACGGGCGGCTCAAGAAAGCTTTCTGCCTCTGGAGGGAAAGTGCCCAAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCTCAGAACAGAGAGGACGGGCAGGGTGCGGGCAGCAGAATTCCACATGGCCCAGCTCCTGCGTTGGGCCTGGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCCAGTGGAGGGAGTGCCTGGCCCTGCGGGGAGCGGAGCGGCAGAAGCTGATGCGAGCAGACCTGCACCACCAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CACAGCGTGCTGCACAGGGCGCTGCAGGCATGGGTGACTTACCAGGGCAGGGTGCGAAGCATCCTCCGGGAGGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGCAGCCAGGGAGAGCCAGCACAACAGGCAGCTGCTGCGCGGGGCATTACGTCGCTGGAAAGAGAACACCATGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCCGAGTGGATGAAGCCAAAAAAACCTTTCAAGCAAGTACTCATTACAGAAGGACCATATGTTCCAAGGTCCTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTCCAGTGGCGGGAAGCTGTGTCAGTGCAGATGTATTACCGACAGCAGGAGGACTGTGCCATCTGGGAGGCCCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAAGGTGCTGGACAGGGGCTGTCTGCGGACCTGGTTTCAGCGCTGGTGGGACTGCAGCCGGAGGTCAGCCCAGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGAGACTGCAGCTGGAGAGGGCAGTGCAACACCACCACCGGCAGCTGCTGCTGGAGGGGCTGGCCCGGTGGAAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACGCACCATCTGCAGTGTGTCAGGAAGAGGCTCCTGCACAGGCAGAGCACCCAACTGCTGGCACAGAGACTCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCGGACCTGCTTCCGCCAGTGGAGACAACAGGCACATCAGCTTCCTTCCGTCTGCAGTCTGCATAAGAACAGTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACTTCAAGCTGGCAGCCAGGAGGCAGGAGCAGCGGGCGACAGTGCGGGCCCTGTGGTTCTGGGCCTTCTCGCTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAGGCAAAGGTGTGGGCCACGTGGCTGGCCTTTGTACTGGAAAGGAGGAGAAAGAAGGCGCGGCTGCAGTGGGC 2516
Query 1 ----------------------------------------------------------------------ATGG 4
|.||
Sbjct 2517 GCTCCAGGCCTACCAGGGGCAGCTCCTCCAGGAGGGTGCCACGCGGCTCCTGCGCTTTGCAGCCAGCATGAAGG 2590
Query 5 CC---------------CAGGCCCACC-------CCA----GCTTAC--------------------------- 25
|| ||||||||.| ||| |||.||
Sbjct 2591 CCTCCCGGCAGCAGCTGCAGGCCCAGCAGCAGGTCCAGGCGGCTCACAGTCTCCATCGTGCCGTCCGCCGCTGT 2664
Query 26 ---------------------TTGCTGACCTTG--------GCCTC-GCCTTTCCTGAC--------------- 54
.|||||..|..| ||||| ||| ||||.|
Sbjct 2665 GCCACGCTCTGGAAACAGAAAGTGCTGGGCCGGGGCGGGAAGCCTCAGCC---CCTGGCAGCCATCGCACCCAG 2735
Query 55 -------------TTTCA--GTCTCCCTATAAA----ATTG--------------------------GAGATC- 82
|||.| |||.||.|.|.|| |||| ||||.|
Sbjct 2736 CAGGAAAGTGACGTTTGAGGGTCCCCTTCTCAACCGCATTGCTGCTGGGGCTGGGGATGGCACCCTTGAGACCA 2809
Query 83 -----CCACAGAGATCTCAGACCCCCCT-GCAGCCCCTGGTCAGCC------CAGGGGAACAGACCCCATGTTT 144
||||||...||||.| ||.|| |.|| |.||||.|.||| |.|.||| .|||||.|
Sbjct 2810 AGAGGCCACAGGCTTCTCGG---CCTCTGGGAG-CTCTGGGCCGCCTGGCTGCTGAGGA----GCCCCACG--- 2872
Query 145 CTTTCC----AG--CAACACTGCCCACTCAGCGAGGAAGCAGCCGCGACGCCCACACTTCCTGTTGGAGCCTGC 212
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2873 ----CCCTGGAGCTCAACACTGCCCACTCAGCGAGGAAGCAGCCGCGACGCCCACACTTCCTGTTGGAGCCTGC 2942
Query 213 GCAGAGCCAGA---------GGCCTCAGAAGCCACAGGAACATGGCCTAGGCATGGCTCAGCCAGCAGCCCCCT 277
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2943 GCAGAGCCAGAGGTCCCTGGGGCCTCAGAAGCCACAGGAACATGGCCTAGGCATGGCTCAGCCAGCAGCCCCCT 3016
Query 278 CCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGACAGCACTGGTCCCACACAGCCCCCTGCCTGGGGCCCTGTCA 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3017 CCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGACAGCACTGGTCCCACACAGCCCCCTGCCTGGGGCCCTGTCA 3090
Query 352 AGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAAGCACAGGCCCGGAGCTGCTGCTGCTGCCTCTTTCCTCCTT 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3091 AGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAAGCACAGGCCCGGAGCTGCTGCTGCTGCCTCTTTCCTCCTT 3164
Query 426 CATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTGTCAGCACAGCGGGCTACTCCTAGGGATAAGCCCCCGGTCC 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3165 CATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTGTCAGCACAGCGGGCTACTCCTAGGGATAAGCCCCCGGTCC 3238
Query 500 CCTCATCCCTGGCCAGTGTCCCTGACCCCCATCTACTCCTTCCTGGGGACTTCTCAGCCACCAGGGCTGGGCCT 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239 CCTCATCCCTGGCCAGTGTCCCTGACCCCCATCTACTCCTTCCTGGGGACTTCTCAGCCACCAGGGCTGGGCCT 3312
Query 574 GGACTTTCAACTGCAGGCAGCCTGGACCTTGAGGCTGAACTTGAGGAGATCCAGCAGCAACTACTGCACTACCA 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3313 GGACTTTCAACTGCAGGCAGCCTGGACCTTGAGGCTGAACTTGAGGAGATCCAGCAGCAACTACTGCACTACCA 3386
Query 648 GACCACCAAGCAGAACCTCTGGTCCTGTCGGCGGCAAGCGAGCAGCCTGCGCAGGTGGCTGGAGCTGAACAGAG 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3387 GACCACCAAGCAGAACCTCTGGTCCTGTCGGCGGCAAGCGAGCAGCCTGCGCAGGTGGCTGGAGCTGAACAGAG 3460
Query 722 AGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCAGCAGGTGCAGAAAGAGCTGGAA------------------ 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3461 AGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCAGCAGGTGCAGAAAGAGCTGGAACAGGTGAGGCCCCAGGCC 3534
Query 778 ---------------------------------------------------------------------CAGGT 782
|||||
Sbjct 3535 ATCCCCAGGTGTCCCTGGGGACGCCCCGGGCTGTGCTCCCTCTCAGCCCTGCCTGTCCCTCCATGGCCCCAGGT 3608
Query 783 GGAAATGCAGATCCAGCTGCTGGCAGAGGAGCTCCAGGCTCAGCGCCAGCCCATTGGCGCCTGCGTTGCCCGCA 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3609 GGAAATGCAGATCCAGCTGCTGGCAGAGGAGCTCCAGGCTCAGCGCCAGCCCATTGGCGCCTGCGTTGCCCGCA 3682
Query 857 TCCAGGCCCTGCGGCAGGCCCTGTGC 882
||||||||||||||||||||||||||
Sbjct 3683 TCCAGGCCCTGCGGCAGGCCCTGTGC 3708
