Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15681
- Subject:
- XM_017029150.2
- Aligned Length:
- 3672
- Identities:
- 836
- Gaps:
- 2808
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGAATCTGCTCACTGAGAAGTGTATATCAAGCCACAATTTCCATCAAAAAGTGATTAAGCAGAGAATGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAAGAAGGTTGATTCCAGGTATTTTAAGGATGGTGCAGTTAAGAAACCTTATTCTGCAAAGACACTGTCCAACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAAGTCTTCTGCATCCTTTGGGATCCGGAGGGAGTTACCTAGTACCAGTCATCTAGTGCAGTATCGTGGCACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATACTTGTACCCGACAGGGCCGGTTAAGAGAACTGCGCATCAGATTTTACTATGAGCAGCGATTACTACGGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTCTTCGAAGAATGGAAAGAGGAGTGGTGGGTTTTCCAGCACGAGTGGAAACTCTGTGTTCGAGCTGACTGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTACAGGTATTACCTGTACAACCTGATGTTCCAGACGTGGAAGACCTATGTGCGTCAGCAGCAGGAGATGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACAAGTACATTAGAGCCGAGGTTCATGATGCAAAGCAAAAGATGCGACAGGCCTGGAAGTCCTGGTTGATCTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGGTTGTTCGTAGGACCAAACTTCAGATGCAGACTACAGCTCTGGAGTTTAGGCAACGGATTATCTTACGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGTGGTGGAGCACGTGGAGGCAGCGACTAGGACAGGTCCGTGTGAGCCGTGCCCTCCATGCCTCTGCTTTGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACAGGGCCCTGAGCCTCCAGGTGCAGGCTTGGTCACAGTGGCGGGAACAGCTCCTGTATGTCCAGAAGGAGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAAAAGGTTGTCTCTGCAGTGAAACATCATCAGCACTGGCAAAAACGGAGATTTCTAAAGGCCTGGCTTGAAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCTGCAAGTCCGCAGAGTGAAGAGACAGCAGAATGAGATGGCTGAGCGATTCCATCATGTCACTGTGCTCCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATATACTTCTGTGACTGGCAGCAGGCCTGGGAGCGGAGGGAGAGCTTGTACGCTCACCATGCCCAGGTGGAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTGGCCAGGAAGATGGCCCTGCGGCGCGCCTTTACTCACTGGAAACACTACATGCTGCTGTGTGCAGAAGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGCCCAGTTTGAGATGGCAGAAGAGCACCACAGGCACAGCCAGCTGTATTTTTGCTTTAGAGCCCTAAAAGAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATGTGACCCACGCTCATCTCCAGCAAATAAGAAGGAATCTTGCTCACCAGCAGCATGGTGTCACGCTGCTGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGGTTCTGGAACCTCTGGCGGTCTCAGATTGAGCAGAAAAAGGAAAGAGAGCTGCTCCCCTTACTGCATGCTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTGGGACCACTACAGAATAGCACTGCTGTGCAAATGTATCGAATTGTGGCTACAGTATACTCAGAAGAGGCGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TACAAGCAGCTGCTACAGGCCAGAGCGGATGGTCATTTCCAGCAGAGAGCCCTGCCTGCTGCCTTCCACACATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAACAGACTCTGGCGATGGCGCCACCAGGAAAATGTCCTCAGTGCAAGAGCAACACGTTTCCACAGGGAGACAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAGAGAAGCAAGTATTTTCTCTCTGGAGGCAGAAGATGTTTCAGCATCGAGAAAACCGCCTGGCAGAGAGAATG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCCATCCTTCACGCAGAGCGACAGCTTCTGTATAGGTCTTGGTTCATGTGGCACCAGCAGGCAGCAGCACGTCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCAGGAGCAGGAGTGGCAAACAGTGGCCTGTGCCCACCACCGCCACGGGCGGCTCAAGAAAGCTTTCTGCCTCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGAGGGAAAGTGCCCAAGGGCTCAGAACAGAGAGGACGGGCAGGGTGCGGGCAGCAGAATTCCACATGGCCCAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCCTGCGTTGGGCCTGGAGCCAGTGGAGGGAGTGCCTGGCCCTGCGGGGAGCGGAGCGGCAGAAGCTGATGCG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCAGACCTGCACCACCAGCACAGCGTGCTGCACAGGGCGCTGCAGGCATGGGTGACTTACCAGGGCAGGGTGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAAGCATCCTCCGGGAGGTGGCAGCCAGGGAGAGCCAGCACAACAGGCAGCTGCTGCGCGGGGCATTACGTCGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGGAAAGAGAACACCATGGCCCGAGTGGATGAAGCCAAAAAAACCTTTCAAGCAAGTACTCATTACAGAAGGAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATATGTTCCAAGGTCCTGGTCCAGTGGCGGGAAGCTGTGTCAGTGCAGATGTATTACCGACAGCAGGAGGACT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTGCCATCTGGGAGGCCCAGAAGGTGCTGGACAGGGGCTGTCTGCGGACCTGGTTTCAGCGCTGGTGGGACTGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGCCGGAGGTCAGCCCAGCAGAGACTGCAGCTGGAGAGGGCAGTGCAACACCACCACCGGCAGCTGCTGCTGGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGGGCTGGCCCGGTGGAAGACGCACCATCTGCAGTGTGTCAGGAAGAGGCTCCTGCACAGGCAGAGCACCCAAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGCTGGCACAGAGACTCAGCCGGACCTGCTTCCGCCAGTGGAGACAACAGCTGGCAGCCAGGAGGCAGGAGCAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CGGGCGACAGTGCGGGCCCTGTGGTTCTGGGCCTTCTCGCTGCAGGCAAAGGTGTGGGCCACGTGGCTGGCCTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGTACTGGAAAGGAGGAGAAAGAAGGCGCGGCTGCAGTGGGCGCTCCAGGCCTACCAGGGGCAGCTCCTCCAGG 2590
Query 1 --------------------------------------ATGGCC---------------CAGGCCCACC----- 16
|.|||| ||||||||.|
Sbjct 2591 AGGGTGCCACGCGGCTCCTGCGCTTTGCAGCCAGCATGAAGGCCTCCCGGCAGCAGCTGCAGGCCCAGCAGCAG 2664
Query 17 --CCA----GCTTAC------------------------------------------------TTGCTGACCTT 36
||| |||.|| .|||||..|..
Sbjct 2665 GTCCAGGCGGCTCACAGTCTCCATCGTGCCGTCCGCCGCTGTGCCACGCTCTGGAAACAGAAAGTGCTGGGCCG 2738
Query 37 G--------GCCTC-GCCTTTCCTGAC----------------------------TTTCA--GTCTCCCTATAA 71
| ||||| ||| ||||.| |||.| |||.||.|.|.|
Sbjct 2739 GGGCGGGAAGCCTCAGCC---CCTGGCAGCCATCGCACCCAGCAGGAAAGTGACGTTTGAGGGTCCCCTTCTCA 2809
Query 72 A----ATTG--------------------------GAGATC------CCACAGAGATCTCAGACCCCCCT-GCA 108
| |||| ||||.| ||||||...||||.| ||.|| |.|
Sbjct 2810 ACCGCATTGCTGCTGGGGCTGGGGATGGCACCCTTGAGACCAAGAGGCCACAGGCTTCTCGG---CCTCTGGGA 2880
Query 109 GCCCCTGGTCAGCC------CAGGGGAACAGACCCCATGTTTCTTTCC----AG--CAACACTGCCCACTCAGC 170
| |.||||.|.||| |.|.||| .|||||.| || || ||||||||||||||||||
Sbjct 2881 G-CTCTGGGCCGCCTGGCTGCTGAGGA----GCCCCACG-------CCCTGGAGCTCAACACTGCCCACTCAGC 2942
Query 171 GAGGAAGCAGCCGCGACGCCCACACTTCCTGTTGGAGCCTGCGCAGAGCCAGAGGCCTCAGAAGCCACAGGAAC 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2943 GAGGAAGCAGCCGCGACGCCCACACTTCCTGTTGGAGCCTGCGCAGAGCCAGAGGCCTCAGAAGCCACAGGAAC 3016
Query 245 ATGGCCTAGGCATGGCTCAGCCAGCAGCCCCCTCCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGACAGCACTG 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3017 ATGGCCTAGGCATGGCTCAGCCAGCAGCCCCCTCCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGACAGCACTG 3090
Query 319 GTCCCACACAGCCCCCTGCCTGGGGCCCTGTCAAGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAAGCACAGG 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3091 GTCCCACACAGCCCCCTGCCTGGGGCCCTGTCAAGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAAGCACAGG 3164
Query 393 CCCGGAGCTGCTGCTGCTGCCTCTTTCCTCCTTCATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTGTCAGCAC 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3165 CCCGGAGCTGCTGCTGCTGCCTCTTTCCTCCTTCATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTGTCAGCAC 3238
Query 467 AGCGGGCTACTCCTAGGGATAAGCCCCCGGTCCCCTCATCCCTGGCCAGTGTCCCTGACCCCCATCTACTCCTT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239 AGCGGGCTACTCCTAGGGATAAGCCCCCGGTCCCCTCATCCCTGGCCAGTGTCCCTGACCCCCATCTACTCCTT 3312
Query 541 CCTGGGGACTTCTCAGCCACCAGGGCTGGGCCTGGACTTTCAACTGCAGGCAGCCTGGACCTTGAGGCTGAACT 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3313 CCTGGGGACTTCTCAGCCACCAGGGCTGGGCCTGGACTTTCAACTGCAGGCAGCCTGGACCTTGAGGCTGAACT 3386
Query 615 TGAGGAGATCCAGCAGCAACTACTGCACTACCAGACCACCAAGCAGAACCTCTGGTCCTGTCGGCGGCAAGCGA 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3387 TGAGGAGATCCAGCAGCAACTACTGCACTACCAGACCACCAAGCAGAACCTCTGGTCCTGTCGGCGGCAAGCGA 3460
Query 689 GCAGCCTGCGCAGGTGGCTGGAGCTGAACAGAGAGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCAGCAGGTG 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3461 GCAGCCTGCGCAGGTGGCTGGAGCTGAACAGAGAGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCAGCAGGTG 3534
Query 763 CAGAAAGAGCTGGAACAGGTGGAAATGCAGATCCAGCTGCTGGCAGAGGAGCTCCAGGCTCAGCGCCAGCCCAT 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3535 CAGAAAGAGCTGGAACAGGTGGAAATGCAGATCCAGCTGCTGGCAGAGGAGCTCCAGGCTCAGCGCCAGCCCAT 3608
Query 837 TGGCGCCTGCGTTGCCCGCATCCAGGCCCTGCGGCAGGCCCTGTGC 882
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3609 TGGCGCCTGCGTTGCCCGCATCCAGGCCCTGCGGCAGGCCCTGTGC 3654
