Nucleotide Global Alignment

Description

• Query: ccsbBroad304_15693
• Subject: NM_001294302.1
• Aligned Length: 1255
• Identities: 721
• Gaps: 425

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGTCGGCGCCGGGGTGTGGAGCTGTACCGGGCCCCGTTCCCGTTGTACGCGCTTCGGATAGACCCCAAGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGGCTGCTCATCGCTGCGGGCGGAGGAGGAGCTGCCAAGACCGGCATAAAGAATGGCGTGCATTTTCTGCAGC  148

Query    1  --------------------------------------------------------------------ATGAAC  6
                                                                                |||||.
Sbjct  149  TAGAGCTGATCAACGGGTGCCTGAGCGCTTCCTTGCTGCACTCTCATGACACGGAGACACGGGCCACCATGAAT  222

Query    7  TTGGCACTGGCTGGTGACATCCTTGCTGCAGGGCAGGATGCCCACTGTCAGCTCCTGCGCTTCCAGGCACATCA  80
            |||||.||.|||||||||||.||||||||.||.|||||||||||.||||||||.||.||.|||||||..|||||
Sbjct  223  TTGGCGCTTGCTGGTGACATTCTTGCTGCCGGACAGGATGCCCAGTGTCAGCTTCTTCGTTTCCAGGTCCATCA  296

Query   81  ACAGCAGGGCAACAAGGCAGAGAAGGCCGGTTCCAAGGAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCCCCAG  154
            ||||.||||||..||.||.||||||.|.|||||||||||||||||.||||||||.||.|||||.||..|.||||
Sbjct  297  ACAGAAGGGCAGTAAAGCGGAGAAGTCAGGTTCCAAGGAGCAGGGACCTCGACAGAGAAAGGGGGCTCCTCCAG  370

Query  155  CAGAGAAGAAATGTGGAGCGGAA----ACCCAGCACGAGGGGCTAGAACTCAGGGTAGAGAATTTGCAGGCGGT  224
            ||||||||||||..|||||..||    ||||    |||.|||.|.|||||||..|||.||||||||.||||.||
Sbjct  371  CAGAGAAGAAATCGGGAGCACAAGTTCACCC----CGAAGGGGTTGAACTCAAAGTAAAGAATTTGGAGGCAGT  440

Query  225  GCAGACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGTGTGCTTCAACCACGATAATACCCTGCTTGCCACTG  298
            .|||||||||||.|||...||.||.||||||||||||||||||||||||||.|||||.||||||||||||||||
Sbjct  441  ACAGACAGACTTCAGCAATGAACCGCTGCAGAAAGTTGTGTGCTTCAACCATGATAACACCCTGCTTGCCACTG  514

Query  299  GAGGAACAGATGGCTACGTCCGTGTCTGGAAGGTGCCCAGCCTGGAGAAGGTTCTGGAGTTCAAAGCCCACGAA  372
            |||||||.|||||..|.||.||||||||||||||.||.|||||||||||.||||||||||||||||||||.|||
Sbjct  515  GAGGAACTGATGGTCATGTTCGTGTCTGGAAGGTACCTAGCCTGGAGAAAGTTCTGGAGTTCAAAGCCCATGAA  588

Query  373  GGGGAGATTGAAGACCTGGCTTTAGGGCCTGATGGCAAGTTGGTAACCGTGGGCCGGGACCTTAAGGCCTCTGT  446
            ||||||||||.|||..||.||||.||.||||||||||||.||||.||.||||||.|||||.|||||||||||||
Sbjct  589  GGGGAGATTGGAGATTTGACTTTGGGTCCTGATGGCAAGCTGGTTACAGTGGGCTGGGACTTTAAGGCCTCTGT  662

Query  447  GTGGCAGAAGGATCAGCTGGTGACACAGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACC  520
            |||||||||||||||.||||||||||||||.||.||||||||.||||||||..|||.|||.|..|||||.||||
Sbjct  663  GTGGCAGAAGGATCAACTGGTGACACAGCTACAGTGGCAAGAGAATGGACCAGCCTCTTCTAATACACCATACC  736

Query  521  GCTACCAGGCCTGCAGGTTTGGGCAGGTTCCAGACCAGCCTGCTGGCCTGCGACTCTTCACAGTGCAAATTCCC  594
            ||||||||||||||||||||||||||||||||||.||||..|.|||.||||||||||||||||||||.||.|||
Sbjct  737  GCTACCAGGCCTGCAGGTTTGGGCAGGTTCCAGATCAGCTCGGTGGGCTGCGACTCTTCACAGTGCAGATACCC  810

Query  595  CACAAGCGCCTGCGCCAGCCCCCTCCCTGCTACCTCACAGCCTGGGATGGCTCCAACTTCTTGCCCCTTCGGAC  668
            |||||||||||.||.||||||||.|||||||||||||||||||||||..|.||||.|||||||||.||||||||
Sbjct  811  CACAAGCGCCTACGTCAGCCCCCACCCTGCTACCTCACAGCCTGGGACAGTTCCACCTTCTTGCCTCTTCGGAC  884

Query  669  CAAGTCCTGTGGCCATGAAGTCGTCTCCTGCCTCGATGTCAGTGAATCCGGCACCTTCCTAGGCCTGGGCACAG  742
            ||..||||||||||||||.|||.|.|||||||||..|||||||||.||.||.||||||||||||||.|||||.|
Sbjct  885  CAGATCCTGTGGCCATGAGGTCATTTCCTGCCTCAGTGTCAGTGATTCGGGTACCTTCCTAGGCCTAGGCACGG  958

Query  743  TCACTGGCTCTGTTGCCATCTACATAGCTTTCTCTCTCCAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATT  816
            |||||||||||||.|||||||||||||||||||||||||||                                 
Sbjct  959  TCACTGGCTCTGTCGCCATCTACATAGCTTTCTCTCTCCAG---------------------------------  999

Query  817  GTGGTGACGGATGTGGCCTTTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCCT  890
                                                                                      
Sbjct 1000  --------------------------------------------------------------------------  999

Query  891  GTTCTCTGTGGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCTGTGTGGCTCC  964
                                                                 |||||||||||||.|||||.|
Sbjct 1000  -----------------------------------------------------GGAGTGTTCCTGTATGGCTTC  1020

Query  965  TGCTCCTGCTGTGTGTCGGGCTTATTATTGTGACCATCCTGCTGCTCCAGAGTGCCTTTCCAGGTTTCCTT  1035
            |||||||||||||||||||.||||||||||                                         
Sbjct 1021  TGCTCCTGCTGTGTGTCGGCCTTATTATTG-----------------------------------------  1050