Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15693
Subject:
NR_138479.1
Aligned Length:
2238
Identities:
1035
Gaps:
1203

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCTGCGCGGAGGGAGCCGCGAGACAGGTGCGCATGCGCAGTGCGCGTCTGCGAGACCGACTTGGACGGAGCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCTGAGGCTCGGCTTCCTGCTGATGGTCAGGGTTTTGGCAACTCCCCGGTGTGAGAGGGGTAGGGAGTGCTCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGGCGGCGACGGGGCCGAGTTCACCAGCCGCCGGGGCAGTAGTCGAAGGCCCGGCGCGGCATGTCCTGGGTGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCGGTGCGGGCAGTGAACGCGCGCCGGGCGGGATGGGCCGGCGCCGGGCGCCAGAGCTGTACCGGGCTCCGTTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCGTTGTACGCGCTTCAGGTCGACCCCAGCACTGGGCTGCTCATCGCTGCGGGCGGAGGAGGCGCCGCCAAGAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGGCATAAAGAATGGCGTGCACTTTCTGCAGCTAGAGCTGATTAATGGGCGCTTGAGTGCCTCCTTGCTGCACT  444

Query    1  --------------------------ATGAACTTGGCACTGGCTGGTGACATCCTTGCTGCAGGGCAGGATGCC  48
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCATGACACAGAGACACGGGCCACCATGAACTTGGCACTGGCTGGTGACATCCTTGCTGCAGGGCAGGATGCC  518

Query   49  CACTGTCAGCTCCTGCGCTTCCAGGCACATCAACAGCAGGGCAACAAGGCAGAGAAGGCCGGTTCCAAGGAGCA  122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CACTGTCAGCTCCTGCGCTTCCAGGCACATCAACAGCAGGGCAACAAGGCAGAGAAGGCCGGTTCCAAGGAGCA  592

Query  123  GGGGCCTCGACAAAGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGTGGAGCGGAAACCCAGCACGAGGGGCTAG  196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGGGCCTCGACAAAGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGTGGAGCGGAAACCCAGCACGAGGGGCTAG  666

Query  197  AACTCAGGGTAGAGAATTTGCAGGCGGTGCAGACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGTGTGCTTC  270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AACTCAGGGTAGAGAATTTGCAGGCGGTGCAGACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGTGTGCTTC  740

Query  271  AACCACGATAATACCCTGCTTGCCACTGGAGGAACAGATGGCTACGTCCGTGTCTGGAAGGTGCCCAGCCTGGA  344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AACCACGATAATACCCTGCTTGCCACTGGAGGAACAGATGGCTACGTCCGTGTCTGGAAGGTGCCCAGCCTGGA  814

Query  345  GAAGGTTCTGGAGTTCAAAGCCCACGAAGGGGAGATTGAAGACCTGGCTTTAGGGCCTGATGGCAAGTTGGTAA  418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAAGGTTCTGGAGTTCAAAGCCCACGAAGGGGAGATTGAAGACCTGGCTTTAGGGCCTGATGGCAAGTTGGTAA  888

Query  419  CCGTGGGCCGGGACCTTAAGGCCTCTGTGTGGCAGAAGGATCAGCTGGTGACACAGCTGCACTGGCAAGAAAAT  492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CCGTGGGCCGGGACCTTAAGGCCTCTGTGTGGCAGAAGGATCAGCTGGTGACACAGCTGCACTGGCAAGAAAAT  962

Query  493  GGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGGTTTGGGCAGGTTCCAGACCAGCCTGCTGG  566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGGTTTGGGCAGGTTCCAGACCAGCCTGCTGG  1036

Query  567  CCTGCGACTCTTCACAGTGCAAATTCCCCACAAGCGCCTGCGCCAGCCCCCTCCCTGCTACCTCACAGCCTGGG  640
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CCTGCGACTCTTCACAGTGCAAATTCCCCACAAGCGCCTGCGCCAGCCCCCTCCCTGCTACCTCACAGCCTGGG  1110

Query  641  ATGGCTCCAACTTCTTGCCCCTTCGGACCAAGTCCTGTGGCCATGAAGTCGTCTCCTGCCTCGATGTC------  708
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct 1111  ATGGCTCCAACTTCTTGCCCCTTCGGACCAAGTCCTGTGGCCATGAAGTCGTCTCCTGCCTCGATGTCAGGTGT  1184

Query  709  --------------------AGTGAATCCGGCACCTTCCTAGGCCTGGGCACAGTCACTGGCTCTGTTGCCATC  762
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GAGACATTGCTGCCTTGGCTAGTGAATCCGGCACCTTCCTAGGCCTGGGCACAGTCACTGGCTCTGTTGCCATC  1258

Query  763  TACATAGCTTTCTCTCTCCAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATGTGGCCTT  836
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TACATAGCTTTCTCTCTCCAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATGTGGCCTT  1332

Query  837  TCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACA  910
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACA  1406

Query  911  GTCGTTGCCAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCTGTGTGGCTCCTGCTCCTGCTGTGTGTCGGG  984
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GTCGTTGCCAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCTGTGTGGCTCCTGCTCCTGCTGTGTGTCGGG  1480

Query  985  CTTATTATTGTGACCATCCTGCTGCTCCAGAGTGCCTTTCCAGGTTTCCTT-----------------------  1035
            |||||||||||||||||||||||||||||||||||||||||||||||||||                       
Sbjct 1481  CTTATTATTGTGACCATCCTGCTGCTCCAGAGTGCCTTTCCAGGTTTCCTTTAGCTTCCCTGCTTCCTGGGAAT  1554

Query 1036  --------------------------------------------------------------------------  1035
                                                                                      
Sbjct 1555  CAGGAGCCTGGACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCCA  1628

Query 1036  --------------------------------------------------------------------------  1035
                                                                                      
Sbjct 1629  CAGCTGAGGTTGCCTCTGACAAGATGAATGGGCACTGCCTGCCCTTCTAGTGAAAAGGCTTGGCTATGGCCCTG  1702

Query 1036  --------------------------------------------------------------------------  1035
                                                                                      
Sbjct 1703  TGTGACTCCAGGTCCCAGGAACCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAG  1776

Query 1036  --------------------------------------------------------------------------  1035
                                                                                      
Sbjct 1777  GCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCTTGTCCTTATCTAGAAACATGT  1850

Query 1036  --------------------------------------------------------------------------  1035
                                                                                      
Sbjct 1851  GAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTCCTCCTCCCCTCAGCCTTGT  1924

Query 1036  --------------------------------------------------------------------------  1035
                                                                                      
Sbjct 1925  GGCCAGTTCCTCTTCACATGAAGCCCCTGGCATTTGCTGGGGAAGGGACTGGCCTGGTACTTGCTGTTAGGGCA  1998

Query 1036  --------------------------------------------------------------------------  1035
                                                                                      
Sbjct 1999  GGAAGGGGCAAAAGGAAGACTTGGGTAGTAATCTGGGGGTTCAGATGGGTAGCACTAAGCCAGCTGGCCTAAAG  2072

Query 1036  --------------------------------------------------------------------------  1035
                                                                                      
Sbjct 2073  ATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAA  2146

Query 1036  --------------------------------------------------------------------------  1035
                                                                                      
Sbjct 2147  AAGTTGATATTTAATAAACAAGGAAAGAGTGAACTGAGACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  2220

Query 1036  ------------------  1035
                              
Sbjct 2221  AAAAAAAAAAAAAAAAAA  2238

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