Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15716
- Subject:
- NM_001324031.2
- Aligned Length:
- 2670
- Identities:
- 1419
- Gaps:
- 1245
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCCAGCCAGGGCAGGGTGGAGAGCTGCAGCTGCAGGTCCGGAGGCGGGGGCCCCCGGGGCGACTCGGGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGACCGCGGGGCGGAGCTGCCGCCCGTGAGTCCGGCCGAGCCACCTGAGCCCGAGCCGCGGGACACCGTCGCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCTCTCCGAATGCTGCGCACCGCGATGGGCCTGAGGAGCTGGCTCGCCGCCCCATGGGGCGCGCTGCCGCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGCCACCGCTGCTGCTGCTCCTGCTGCTGCTGCTCCTGCTGCAGCCGCCGCCTCCGACCTGGGCGCTCAGCCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGGATCAGCCTGCCTCTGGGCTCTGAAGAGCGGCCATTCCTCAGATTCGAAGCTGAACACATCTCCAACTACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGCCCTTCTGCTGAGCAGGGATGGCAGGACCCTGTACGTGGGTGCTCGAGAGGCCCTCTTTGCACTCAGTAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACCTCAGCTTCCTGCCAGGCGGGGAGTACCAGGAGCTGCTTTGGGGTGCAGACGCAGAGAAGAAACAGCAGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGCTTCAAGGGCAAGGACCCACAGCGCGACTGTCAAAACTACATCAAGATCCTCCTGCCGCTCAGCGGCAGTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCTGTTCACCTGTGGCACAGCAGCCTTCAGCCCCATGTGTACCTACATCAACATGGAGAACTTCACCCTGGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGGACGAGAAGGGGAATGTCCTCCTGGAAGATGGCAAGGGCCGTTGTCCCTTCGACCCGAATTTCAAGTCCAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCCCTGGTGGTTGATGGCGAGCTCTACACTGGAACAGTCAGCAGCTTCCAAGGGAATGACCCGGCCATCTCGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAGCCAAAGCCTTCGCCCCACCAAGACCGAGAGCTCCCTCAACTGGCTGCAAGACCCAGCTTTTGTGGCCTCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCTACATTCCTGAGAGCCTGGGCAGCTTGCAAGGCGATGATGACAAGATCTACTTTTTCTTCAGCGAGACTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCAGGAATTTGAGTTCTTTGAGAACACCATTGTGTCCCGCATTGCCCGCATCTGCAAGGGCGATGAGGGTGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCGGGTGCTACAGCAGCGCTGGACCTCCTTCCTCAAGGCCCAGCTGCTGTGCTCACGGCCCGACGATGGCTTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCTTCAACGTGCTGCAGGATGTCTTCACGCTGAGCCCCAGCCCCCAGGACTGGCGTGACACCCTTTTCTATGG 1184
Query 1 -------------------------------------------------------------ATGAAGGATGTGC 13
|||||||||||||
Sbjct 1185 GGTCTTCACTTCCCAGTGGCACAGGGGAACTACAGAAGGCTCTGCCGTCTGTGTCTTCACAATGAAGGATGTGC 1258
Query 14 AGAGAGTCTTCAGCGGCCTCTACAAGGAGGTGAACCGTGAGACACAGCAGTGGTACACCGTGACCCACCCGGTG 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGAGAGTCTTCAGCGGCCTCTACAAGGAGGTGAACCGTGAGACACAGCAGTGGTACACCGTGACCCACCCGGTG 1332
Query 88 CCCACACCCCGGCCTGGAGCGTGCATCACCAACAGTGCCCGGGAAAGGAAGATCAACTCATCCCTGCAGCTCCC 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCACACCCCGGCCTGGAGCGTGCATCACCAACAGTGCCCGGGAAAGGAAGATCAACTCATCCCTGCAGCTCCC 1406
Query 162 AGACCGCGTGCTGAACTTTCTCAAGGACCACTTCCTGATGGACGGGCAGGTCCGAAGCCGCATGCTGCTGCTGC 235
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGACCGCGTGCTGAACTTCCTCAAGGACCACTTCCTGATGGACGGGCAGGTCCGAAGCCGCATGCTGCTGCTGC 1480
Query 236 AGCCCCAGGCTCGCTACCAGCGCGTGGCTGTACACCGCGTCCCTGGCCTGCACCACACCTACGATGTCCTCTTC 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGCCCCAGGCTCGCTACCAGCGCGTGGCTGTACACCGCGTCCCTGGCCTGCACCACACCTACGATGTCCTCTTC 1554
Query 310 CTCGGCACTGGTGACGGCCGGCTCCACAAGGCAGTGAGCGTGGGCCCCCGGGTGCACATCATTGAGGAGCTGCA 383
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CTGGGCACTGGTGACGGCCGGCTCCACAAGGCAGTGAGCGTGGGCCCCCGGGTGCACATCATTGAGGAGCTGCA 1628
Query 384 GATCTTCTCATCGGGACAGCCCGTGCAGAATCTGCTCCTGGACACCCACAGGGGGCTGCTGTATGCGGCCTCAC 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GATCTTCTCATCGGGACAGCCCGTGCAGAATCTGCTCCTGGACACCCACAGGGGGCTGCTGTATGCGGCCTCAC 1702
Query 458 ACTCGGGCGTAGTCCAGGTGCCCATGGCCAACTGCAGCCTGTACCGGAGCTGTGGGGACTGCCTCCTCGCCCGG 531
||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1703 ACTCGGGCGTAGTCCAGGTGCCCATGGCCAACTGCAGCCTGTACAGGAGCTGTGGGGACTGCCTCCTCGCCCGG 1776
Query 532 GACCCCTACTGTGCTTGGAGCGGCTCCAGCTGCAAGCACGTCAGCCTCTACCAGCCTCAGCTGGCCACCAGGCC 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GACCCCTACTGTGCTTGGAGCGGCTCCAGCTGCAAGCACGTCAGCCTCTACCAGCCTCAGCTGGCCACCAGGCC 1850
Query 606 GTGGATCCAGGACATCAAGGGAGCCAGCGCCAAGGACCTTTGCAGCGCGTCTTCGGTTGTGTCCCCGTCTTTTG 679
||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GTGGATCCAGGACATCGAGGGAGCCAGCGCCAAGGACCTTTGCAGCGCGTCTTCGGTTGTGTCCCCGTCTTTTG 1924
Query 680 TACCAACAGGGGAGAAGCCATGTGAGCAAGTCCAGTTCCAGCCCAACACAGTGAACACTTTGGCCTGCCCGCTC 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TACCAACAGGGGAGAAGCCATGTGAGCAAGTCCAGTTCCAGCCCAACACAGTGAACACTTTGGCCTGCCCGCTC 1998
Query 754 CTCTCCAACCTGGCGACCCGACTCTGGCTACGCAACGGGGCCCCCGTCAATGCCTCGGCCTCCTGCCACGTGCT 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CTCTCCAACCTGGCGACCCGACTCTGGCTACGCAACGGGGCCCCCGTCAATGCCTCGGCCTCCTGCCACGTGCT 2072
Query 828 ACCCACTGGGGACCTGCTGCTGGTGGGCACCCAACAGCTGGGGGAGTTCCAGTGCTGGTCACTAGAGGAGGGCT 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 ACCCACTGGGGACCTGCTGCTGGTGGGCACCCAACAGCTGGGGGAGTTCCAGTGCTGGTCACTAGAGGAGGGCT 2146
Query 902 TCCAGCAGCTGGTAGCCAGCTACTGCCCAGAGGTGGTGGAGGACGGGGTGGCAGACCAAACAGATGAGGGTGGC 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCCAGCAGCTGGTAGCCAGCTACTGCCCAGAGGTGGTGGAGGACGGGGTGGCAGACCAAACAGATGAGGGTGGC 2220
Query 976 AGTGTACCCGTCATTATCAGCACATCGCGTGTGAGTGCACCAGCTGGTGGCAAGGCCAGCTGGGGTGCAGACAG 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AGTGTACCCGTCATTATCAGCACATCGCGTGTGAGTGCACCAGCTGGTGGCAAGGCCAGCTGGGGTGCAGACAG 2294
Query 1050 GTCCTACTGGAAGGAGTTCCTGGTGATGTGCACGCTCTTTGTGCTGGCCGTGCTGCTCCCAGTTTTATTCTTGC 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GTCCTACTGGAAGGAGTTCCTGGTGATGTGCACGCTCTTTGTGCTGGCCGTGCTGCTCCCAGTTTTATTCTTGC 2368
Query 1124 TCTACCGGCACCGGAACAGCATGAAAGTCTTCCTGAAGCAGGGGGAATGTGCCAGCGTGCACCCCAAGACCTGC 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TCTACCGGCACCGGAACAGCATGAAAGTCTTCCTGAAGCAGGGGGAATGTGCCAGCGTGCACCCCAAGACCTGC 2442
Query 1198 CCTGTGGTGCTGCCCCCTGAGACCCGCCCACTCAACGGCCTAGGGCCCCCTAGCACCCCACTCGATCACCGAGG 1271
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 2443 CCTGTGGTGCTGCCCCCTGAGACCCGCCCACTCAACGGCCTAGGGCCCCCTAGCACCCCGCTCGATCACCGAGG 2516
Query 1272 GTACCAGTCCCTGTCAGACAGCCCCCCGGGGGCCCGAGTCTTCACTGAGTCAGAGAAGAGGCCACTCAGCATCC 1345
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GTACCAGTCCCTGTCAGACAGCCCCCCGGGGTCCCGAGTCTTCACTGAGTCAGAGAAGAGGCCACTCAGCATCC 2590
Query 1346 AAGACAGCTTCGTGGAGGTATCCCCAGTGTGCCCCCGGCCCCGGGTCCGCCTTGGCTCGGAGATCCGTGACTCT 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AAGACAGCTTCGTGGAGGTATCCCCAGTGTGCCCCCGGCCCCGGGTCCGCCTTGGCTCGGAGATCCGTGACTCT 2664
Query 1420 GTGGTG 1425
||||||
Sbjct 2665 GTGGTG 2670
