Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15716
- Subject:
- NM_001324032.2
- Aligned Length:
- 2530
- Identities:
- 697
- Gaps:
- 1829
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGCGCACCGCGATGGGCCTGAGGAGCTGGCTCGCCGCCCCATGGGGCGCGCTGCCGCCTCGGCCACCGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTGCTGCTCCTGCTGCTGCTGCTCCTGCTGCAGCCGCCGCCTCCGACCTGGGCGCTCAGCCCCCGGATCAGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCCTCTGGGCTCTGAAGAGCGGCCATTCCTCAGATTCGAAGCTGAACACATCTCCAACTACACAGCCCTTCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGAGCAGGGATGGCAGGACCCTGTACGTGGGTGCTCGAGAGGCCCTCTTTGCACTCAGTAGCAACCTCAGCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTGCCAGGCGGGGAGTACCAGGAGCTGCTTTGGGGTGCAGACGCAGAGAAGAAACAGCAGTGCAGCTTCAAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCAAGGACCCACAGCGCGACTGTCAAAACTACATCAAGATCCTCCTGCCGCTCAGCGGCAGTCACCTGTTCACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTGGCACAGCAGCCTTCAGCCCCATGTGTACCTACATCAACATGGAGAACTTCACCCTGGCAAGGGACGAGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGGAATGTCCTCCTGGAAGATGGCAAGGGCCGTTGTCCCTTCGACCCGAATTTCAAGTCCACTGCCCTGGTGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGATGGCGAGCTCTACACTGGAACAGTCAGCAGCTTCCAAGGGAATGACCCGGCCATCTCGCGGAGCCAAAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTCGCCCCACCAAGACCGAGAGCTCCCTCAACTGGCTGCAAGACCCAGCTTTTGTGGCCTCAGCCTACATTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGAGAGCCTGGGCAGCTTGCAAGGCGATGATGACAAGATCTACTTTTTCTTCAGCGAGACTGGCCAGGAATTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTTCTTTGAGAACACCATTGTGTCCCGCATTGCCCGCATCTGCAAGGGCGATGAGGGTGGAGAGCGGGTGCTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGCAGCGCTGGACCTCCTTCCTCAAGGCCCAGCTGCTGTGCTCACGGCCCGACGATGGCTTCCCCTTCAACGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTGCAGGATGTCTTCACGCTGAGCCCCAGCCCCCAGGACTGGCGTGACACCCTTTTCTATGGGGTCTTCACTT 1036
Query 1 --------------------------------------------------ATGAAGGATGTGCAGAGAGTCTTC 24
||||||||||||||||||||||||
Sbjct 1037 CCCAGTGGCACAGGGGAACTACAGAAGGCTCTGCCGTCTGTGTCTTCACAATGAAGGATGTGCAGAGAGTCTTC 1110
Query 25 AGCGGCCTCTACAAGGAGGTGAACCGTGAGACACAGCAGTGGTACACCGTGACCCACCCGGTGCCCACACCCCG 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGCGGCCTCTACAAGGAGGTGAACCGTGAGACACAGCAGTGGTACACCGTGACCCACCCGGTGCCCACACCCCG 1184
Query 99 GCCTGGAGCGTGCATCACCAACAGTGCCCGGGAAAGGAAGATCAACTCATCCCTGCAGCTCCCAGACCGCGTGC 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCCTGGAGCGTGCATCACCAACAGTGCCCGGGAAAGGAAGATCAACTCATCCCTGCAGCTCCCAGACCGCGTGC 1258
Query 173 TGAACTTTCTCAAGGACCACTTCCTGATGGACGGGCAGGTCCGAAGCCGCATGCTGCTGCTGCAGCCCCAGGCT 246
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGAACTTCCTCAAGGACCACTTCCTGATGGACGGGCAGGTCCGAAGCCGCATGCTGCTGCTGCAGCCCCAGGCT 1332
Query 247 CGCTACCAGCGCGTGGCTGTACACCGCGTCCCTGGCCTGCACCACACCTACGATGTCCTCTTCCTCGGCACTGG 320
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1333 CGCTACCAGCGCGTGGCTGTACACCGCGTCCCTGGCCTGCACCACACCTACGATGTCCTCTTCCTGGGCACTGG 1406
Query 321 TGACGGCCGGCTCCACAAGGCAGTGAGCGTGGGCCCCCGGGTGCACATCATTGAGGAGCTGCAGATCTTCTCAT 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGACGGCCGGCTCCACAAGGCAGTGAGCGTGGGCCCCCGGGTGCACATCATTGAGGAGCTGCAGATCTTCTCAT 1480
Query 395 CGGGACAGCCCGTGCAGAATCTGCTCCTGGACACCCACAGGGGGCTGCTGTATGCGGCCTCACACTCGGGCGTA 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CGGGACAGCCCGTGCAGAATCTGCTCCTGGACACCCACAGGGGGCTGCTGTATGCGGCCTCACACTCGGGCGTA 1554
Query 469 GTCCAGGTGCCCATGGCCAACTGCAGCCTGTACCGGAGCTGTGGGGACTGCCTCCTCGCCCGGGACCCCTACTG 542
|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GTCCAGGTGCCCATGGCCAACTGCAGCCTGTACAGGAGCTGTGGGGACTGCCTCCTCGCCCGGGACCCCTACTG 1628
Query 543 TGCTTGGAGCGGCTCCAGCTGCAAGCACGTCAGCCTCTACCAGCCTCAGCTGGCCAC----------------- 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TGCTTGGAGCGGCTCCAGCTGCAAGCACGTCAGCCTCTACCAGCCTCAGCTGGCCACCAGAATTCTCTCTGGCC 1702
Query 600 --CAGGCCGTGGATCCAGGACATCAAGGGAGCCAGCGCCAAGGACCTTTGCAGCGCGTCTTCGGTTGTGTCCCC 671
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CTCAGGCCGTGGATCCAGGACATCGAGGGAGCCAGCGCCAAGGACCTTTGCAGCGCGTCTTCGGTTGTGTCCCC 1776
Query 672 GTCTTTTGTACCAACAGGGGAGAAGCCATGTGAGCAAGTCCAGTTCCAGCCCAACACAGTGAACACTTTGGCCT 745
||||||||||||||||||||||||||||||
Sbjct 1777 GTCTTTTGTACCAACAGGGGAGAAGCCATG-------------------------------------------- 1806
Query 746 GCCCGCTCCTCTCCAACCTGGCGACCCGACTCTGGCTACGCAACGGGGCCCCCGTCAATGCCTCGGCCTCCTGC 819
Sbjct 1807 -------------------------------------------------------------------------- 1806
Query 820 CACGTGCTACCCACTGGGGACCTGCTGCTGGTGGGCACCCAACAGCTGGGGGAGTTCCAGTGCTGGTCACTAGA 893
Sbjct 1807 -------------------------------------------------------------------------- 1806
Query 894 GGAGGGCTTCCAGCAGCTGGTAGCCAGCTACTGCCCAGAGGTGGTGGAGGACGGGGTGGCAGACCAAACAGATG 967
Sbjct 1807 -------------------------------------------------------------------------- 1806
Query 968 AGGGTGGCAGTGTACCCGTCATTATCAGCACATCGCGTGTGAGTGCACCAGCTGGTGGCAAGGCCAGCTGGGGT 1041
Sbjct 1807 -------------------------------------------------------------------------- 1806
Query 1042 GCAGACAGGTCCTACTGGAAGGAGTTCCTGGTGATGTGCACGCTCTTTGTGCTGGCCGTGCTGCTCCCAGTTTT 1115
Sbjct 1807 -------------------------------------------------------------------------- 1806
Query 1116 ATTCTTGCTCTACCGGCACCGGAACAGCATGAAAGTCTTCCTGAAGCAGGGGGAATGTGCCAGCGTGCACCCCA 1189
Sbjct 1807 -------------------------------------------------------------------------- 1806
Query 1190 AGACCTGCCCTGTGGTGCTGCCCCCTGAGACCCGCCCACTCAACGGCCTAGGGCCCCCTAGCACCCCACTCGAT 1263
Sbjct 1807 -------------------------------------------------------------------------- 1806
Query 1264 CACCGAGGGTACCAGTCCCTGTCAGACAGCCCCCCGGGGGCCCGAGTCTTCACTGAGTCAGAGAAGAGGCCACT 1337
Sbjct 1807 -------------------------------------------------------------------------- 1806
Query 1338 CAGCATCCAAGACAGCTTCGTGGAGGTATCCCCAGTGTGCCCCCGGCCCCGGGTCCGCCTTGGCTCGGAGATCC 1411
Sbjct 1807 -------------------------------------------------------------------------- 1806
Query 1412 GTGACTCTGTGGTG 1425
Sbjct 1807 -------------- 1806
