Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15747
- Subject:
- NM_001163433.1
- Aligned Length:
- 1962
- Identities:
- 818
- Gaps:
- 1059
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAACTGCTGCCCAAGATCCTGGCACACTCTATCGAACACAACCAGCACATTGAGGAGAGCAGGCAGCTGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCCTATGCTTTGATCCACCCAGCCACTTCCTTGGAAGACCGCAGCGCACTAGCCATGTGGCTGAATCACTTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGACCGCACATCCACCAGCTTTGGTAGCCAGAACCGAGGCCGCTCGGACTCTGTGGATTATGGACAGACGCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TACTATCACCAAAGACAGAACTCTGACGATAAGCTCAATGGCTGGCAGAACTCTCGGGATTCTGGGATTTGCAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGTGCCTCCAACTGGCAGGACAAGAGCCTGGGCTGTGAGAATGGCCATGTGCCCCTCTACTCTTCCTCGTCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCCTGCCACAATCAACACGATTGGAACCGGCGCAAGCACGATTCTCTCAGGCCAGGCACACCACAGCCCTTTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAACGATCTGTGTCCCTTACCCCACCCATGAATGTGCCAAACCAGCCTCTAGGACATGGATGGATGTCTCATGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGACTTACGAGCTAGAGGACCTCAGTGCCTCCCATCCGATCATGCCCCCCTGTCTCCACAAAGCAGTGTAGCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTCAGGAAGTGGTGGGAGTGAACACTTAGAAGATCAGACCACTGCTCGTAACACATTCCAAGAAGAAGGTAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGTATGAAAGATGTTCCAGCTTGGTTAAAAAGCCTCCGCCTGCACAAGTACGCTGCGCTCTTCTCGCAGATGAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTATGAGGAAATGATGGCCCTCACTGAGTGTCAACTGGAGGCTCAGAATGTTACCAAAGGCGCAAGACACAAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGTAATCAGTATTCAGAAGCTCAAAGAAAGACAGAACCTCCTGAAGTCTTTGGAAAGGGACATCATCGAAGGG 888
Query 1 ------------------------------------ATGATCCTGACTCCGATCAAGGCCTACAGCTCCCCGAG 38
|||||||||||.||.|||||||||||||||||.||.||
Sbjct 889 GGCAGCCTGCGCACCCCCCTCCAGGAGCTACATCAGATGATCCTGACACCCATCAAGGCCTACAGCTCTCCCAG 962
Query 39 CACCACCCCCGAGGCTCGCCGCCGGGAGCCCCAGGCCCCGCGTCAGCCCTCACTGATGGGCCCCGAGAGCCAGA 112
.||||||||.||||..|||.|||||| |||||||||||||| |||||||..|
Sbjct 963 TACCACCCCTGAGGTGCGCTGCCGGG------------------AGCCCTCACTGATG------GAGAGCCCAA 1012
Query 113 GCCCCGACTGCAAAGATGGGGCCGCAGC---CACTGGCGCCACGGCCACCCCCTCGGCCGGGGCCAGCGGGGGG 183
||||.|||||||||||..|.||.||||| |||..|||||||.||||...||||.|||||.||||||||.||.
Sbjct 1013 GCCCTGACTGCAAAGACAGCGCTGCAGCAGTCACCAGCGCCACAGCCAGTGCCTCAGCCGGTGCCAGCGGTGGA 1086
Query 184 CTCCAGCCGCACCAGCTGAGCAGCTGCGATGGGGAGCTGGCCGTCGCCCCCCTGCCAGAGGGGGACCTCCCCGG 257
||.||.||.|.||||||||||||||||||.||.||||||||.||||||||.|||||.||||||||||||||.||
Sbjct 1087 CTGCAACCACCCCAGCTGAGCAGCTGCGACGGAGAGCTGGCTGTCGCCCCTCTGCCGGAGGGGGACCTCCCGGG 1160
Query 258 GCAGTTCACACGCGTCATGGGGAAAGTGTGCACACAGCTCTTGGTCTCCAGACCTGATGAGGAAAATATAAGTT 331
|||||||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||.|
Sbjct 1161 GCAGTTCACCCGAGTCATGGGGAAAGTGTGCACACAGCTCTTGGTCTCCAGACCCGATGAAGAAAATATAAGCT 1234
Query 332 CCTATTTACAGCTCATAGACAAGTGTCTAATTCATGAGGCATTTACAGAGACACAGAAAAAAAGATTGTTGTCA 405
|||||.||||||||.|||||||||||||..||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1235 CCTATCTACAGCTCTTAGACAAGTGTCTTGTTCATGAGGCATTTACAGAGACACAGAAAAAAAGATTGTTGTCA 1308
Query 406 TGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCCTCGGAAAACCCTTCTAGACATATCAGGATATCGACA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1309 TGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCCTCGGAAAACCCTTCTAGACATATCAGGATATCGACA 1382
Query 480 GCAAAGAAATCGAGGCTTTGGGCAATCCAACTCCCTCCCGACGGCTGGCTCTGTGGGCGGTGGCATGGGCAGAC 553
||||||||||||.|||||||||||.||||||||||||||.||.||..|||||||||||.|.|||||||||||||
Sbjct 1383 GCAAAGAAATCGTGGCTTTGGGCAGTCCAACTCCCTCCCAACAGCCAGCTCTGTGGGCAGCGGCATGGGCAGAC 1456
Query 554 GGAACCCGCGCCAGTACCAGATCCCCTCTCGGAACGTCCCTTCCGCCCGCCTGGGCCTCTTGGGCACCAGTGGA 627
|||||||.||.||||||||||||.|.||||||||.|||||||||||||||||.||.|||.||||||||||||||
Sbjct 1457 GGAACCCACGACAGTACCAGATCGCATCTCGGAATGTCCCTTCCGCCCGCCTTGGTCTCCTGGGCACCAGTGGA 1530
Query 628 TTCGTCAGCTCCAACCAGCGCAACACCACAGCTACCCCCACCATCATGAAACAAGGAAGACAGAACCTGTGGTT 701
||.||||||||||||||||||.|||||.|.||.|.|||||||||||||||||||||||||||||||||.|||||
Sbjct 1531 TTTGTCAGCTCCAACCAGCGCCACACCGCTGCCAACCCCACCATCATGAAACAAGGAAGACAGAACCTCTGGTT 1604
Query 702 TGCCAACCCCGGGGGCAGCAATAGCATGCCAAGCCGCACCCACAGCTCAGTCCAGAGGACCCGCTCGCTGCCCG 775
|||||||||.|||||||||||.||||||||.|||||||||||||||||.|||||||.|||||||||||||||||
Sbjct 1605 TGCCAACCCTGGGGGCAGCAACAGCATGCCCAGCCGCACCCACAGCTCCGTCCAGAAGACCCGCTCGCTGCCCG 1678
Query 776 TGCACACTTCCCCACAGAACATGCTGATGTTCCAGCAGCCAGGTTCCCAAGTTCACAGTGGACTGTGTTTAACA 849
||||.|||||||||||.||||||||||||||||||||.||
Sbjct 1679 TGCATACTTCCCCACAAAACATGCTGATGTTCCAGCAACC---------------------------------- 1718
Query 850 GACCTTAGAGGTTGGTTGAGCCTGAGTGGAGCCCCTTCCATGCCAGCGCTGACAGTCCCCAAGTCCTCCCAGGG 923
Sbjct 1719 -------------------------------------------------------------------------- 1718
Query 924 AGAATTCCAGCTTCCCGTGACCGAACCTGACATCAACAACAGGCTGGAGTCGTTGTGCCTCAGTATGACCGAAC 997
||||||.||||||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||||||||.||.|
Sbjct 1719 AGAATTTCAGCTTCCTGTGACTGAACCTGACATCAACAATAGGCTGGAGTCCTTGTGCCTCAGTATGACGGAGC 1792
Query 998 ACGCCCTGGGAGACGGGGTTGACCGGACCTCCACCATC 1035
|.||||||||||||||||||||||||||||||||.|||
Sbjct 1793 ATGCCCTGGGAGACGGGGTTGACCGGACCTCCACAATC 1830
