Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15747
- Subject:
- XM_006519628.2
- Aligned Length:
- 2112
- Identities:
- 818
- Gaps:
- 1209
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAACTGCTGCCCAAGATCCTGGCACACTCTATCGAACACAACCAGCACATTGAGGAGAGCAGGCAGCTGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCCTATGCTTTGATCCACCCAGCCACTTCCTTGGAAGACCGCAGCGCACTAGCCATGTGGCTGAATCACTTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGACCGCACATCCACCAGCTTTGGTAGCCAGAACCGAGGCCGCTCGGACTCTGTGGATTATGGACAGACGCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TACTATCACCAAAGACAGAACTCTGACGATAAGCTCAATGGCTGGCAGAACTCTCGGGATTCTGGGATTTGCAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGTGCCTCCAACTGGCAGGACAAGAGCCTGGGCTGTGAGAATGGCCATGTGCCCCTCTACTCTTCCTCGTCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCCTGCCACAATCAACACGATTGGAACCGGCGCAAGCACGAGTACCACAGGTCCCACCTCCTCTGGTCAATCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTTTTGGCAAGTCCTATTCTGTGGTTTCAAACTCACTTGAATTCCAGCTGTGCAGAGGGAGCCCCATCTGGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGTGGCCATACCTGGCCAGCACCATTTGAAGTCCCCACCAGAGTTCTCTCAGGCCAGGCACACCACAGCCCTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGAAACGATCTGTGTCCCTTACCCCACCCATGAATGTGCCAAACCAGCCTCTAGGACATGGATGGATGTCTCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGGACTTACGAGCTAGAGGACCTCAGTGCCTCCCATCCGATCATGCCCCCCTGTCTCCACAAAGCAGTGTAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCTTCAGGAAGTGGTGGGAGTGAACACTTAGAAGATCAGACCACTGCTCGTAACACATTCCAAGAAGAAGGTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTGGTATGAAAGATGTTCCAGCTTGGTTAAAAAGCCTCCGCCTGCACAAGTACGCTGCGCTCTTCTCGCAGATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTTATGAGGAAATGATGGCCCTCACTGAGTGTCAACTGGAGGCTCAGAATGTTACCAAAGGCGCAAGACACAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATTGTAATCAGTATTCAGAAGCTCAAAGAAAGACAGAACCTCCTGAAGTCTTTGGAAAGGGACATCATCGAAG 1036
Query 1 --------------------------------------ATGATCCTGACTCCGATCAAGGCCTACAGCTCCCCG 36
|||||||||||.||.|||||||||||||||||.||.
Sbjct 1037 GGGGCAGCCTGCGCACCCCCCTCCAGGAGCTACATCAGATGATCCTGACACCCATCAAGGCCTACAGCTCTCCC 1110
Query 37 AGCACCACCCCCGAGGCTCGCCGCCGGGAGCCCCAGGCCCCGCGTCAGCCCTCACTGATGGGCCCCGAGAGCCA 110
||.||||||||.||||..|||.|||||| |||||||||||||| |||||||.
Sbjct 1111 AGTACCACCCCTGAGGTGCGCTGCCGGG------------------AGCCCTCACTGATG------GAGAGCCC 1160
Query 111 GAGCCCCGACTGCAAAGATGGGGCCGCAGC---CACTGGCGCCACGGCCACCCCCTCGGCCGGGGCCAGCGGGG 181
.|||||.|||||||||||..|.||.||||| |||..|||||||.||||...||||.|||||.||||||||.|
Sbjct 1161 AAGCCCTGACTGCAAAGACAGCGCTGCAGCAGTCACCAGCGCCACAGCCAGTGCCTCAGCCGGTGCCAGCGGTG 1234
Query 182 GGCTCCAGCCGCACCAGCTGAGCAGCTGCGATGGGGAGCTGGCCGTCGCCCCCCTGCCAGAGGGGGACCTCCCC 255
|.||.||.||.|.||||||||||||||||||.||.||||||||.||||||||.|||||.||||||||||||||.
Sbjct 1235 GACTGCAACCACCCCAGCTGAGCAGCTGCGACGGAGAGCTGGCTGTCGCCCCTCTGCCGGAGGGGGACCTCCCG 1308
Query 256 GGGCAGTTCACACGCGTCATGGGGAAAGTGTGCACACAGCTCTTGGTCTCCAGACCTGATGAGGAAAATATAAG 329
|||||||||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct 1309 GGGCAGTTCACCCGAGTCATGGGGAAAGTGTGCACACAGCTCTTGGTCTCCAGACCCGATGAAGAAAATATAAG 1382
Query 330 TTCCTATTTACAGCTCATAGACAAGTGTCTAATTCATGAGGCATTTACAGAGACACAGAAAAAAAGATTGTTGT 403
.||||||.||||||||.|||||||||||||..||||||||||||||||||||||||||||||||||||||||||
Sbjct 1383 CTCCTATCTACAGCTCTTAGACAAGTGTCTTGTTCATGAGGCATTTACAGAGACACAGAAAAAAAGATTGTTGT 1456
Query 404 CATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCCTCGGAAAACCCTTCTAGACATATCAGGATATCGA 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1457 CATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCCTCGGAAAACCCTTCTAGACATATCAGGATATCGA 1530
Query 478 CAGCAAAGAAATCGAGGCTTTGGGCAATCCAACTCCCTCCCGACGGCTGGCTCTGTGGGCGGTGGCATGGGCAG 551
||||||||||||||.|||||||||||.||||||||||||||.||.||..|||||||||||.|.|||||||||||
Sbjct 1531 CAGCAAAGAAATCGTGGCTTTGGGCAGTCCAACTCCCTCCCAACAGCCAGCTCTGTGGGCAGCGGCATGGGCAG 1604
Query 552 ACGGAACCCGCGCCAGTACCAGATCCCCTCTCGGAACGTCCCTTCCGCCCGCCTGGGCCTCTTGGGCACCAGTG 625
|||||||||.||.||||||||||||.|.||||||||.|||||||||||||||||.||.|||.||||||||||||
Sbjct 1605 ACGGAACCCACGACAGTACCAGATCGCATCTCGGAATGTCCCTTCCGCCCGCCTTGGTCTCCTGGGCACCAGTG 1678
Query 626 GATTCGTCAGCTCCAACCAGCGCAACACCACAGCTACCCCCACCATCATGAAACAAGGAAGACAGAACCTGTGG 699
||||.||||||||||||||||||.|||||.|.||.|.|||||||||||||||||||||||||||||||||.|||
Sbjct 1679 GATTTGTCAGCTCCAACCAGCGCCACACCGCTGCCAACCCCACCATCATGAAACAAGGAAGACAGAACCTCTGG 1752
Query 700 TTTGCCAACCCCGGGGGCAGCAATAGCATGCCAAGCCGCACCCACAGCTCAGTCCAGAGGACCCGCTCGCTGCC 773
|||||||||||.|||||||||||.||||||||.|||||||||||||||||.|||||||.|||||||||||||||
Sbjct 1753 TTTGCCAACCCTGGGGGCAGCAACAGCATGCCCAGCCGCACCCACAGCTCCGTCCAGAAGACCCGCTCGCTGCC 1826
Query 774 CGTGCACACTTCCCCACAGAACATGCTGATGTTCCAGCAGCCAGGTTCCCAAGTTCACAGTGGACTGTGTTTAA 847
||||||.|||||||||||.||||||||||||||||||||.||
Sbjct 1827 CGTGCATACTTCCCCACAAAACATGCTGATGTTCCAGCAACC-------------------------------- 1868
Query 848 CAGACCTTAGAGGTTGGTTGAGCCTGAGTGGAGCCCCTTCCATGCCAGCGCTGACAGTCCCCAAGTCCTCCCAG 921
Sbjct 1869 -------------------------------------------------------------------------- 1868
Query 922 GGAGAATTCCAGCTTCCCGTGACCGAACCTGACATCAACAACAGGCTGGAGTCGTTGTGCCTCAGTATGACCGA 995
||||||.||||||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||||||||.||
Sbjct 1869 --AGAATTTCAGCTTCCTGTGACTGAACCTGACATCAACAATAGGCTGGAGTCCTTGTGCCTCAGTATGACGGA 1940
Query 996 ACACGCCCTGGGAGACGGGGTTGACCGGACCTCCACCATC 1035
.||.||||||||||||||||||||||||||||||||.|||
Sbjct 1941 GCATGCCCTGGGAGACGGGGTTGACCGGACCTCCACAATC 1980
