Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15765
- Subject:
- NM_001308506.1
- Aligned Length:
- 2505
- Identities:
- 552
- Gaps:
- 1884
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGCACCTACTGAAGACGGTGGTGGCTGGCTGTTCATGTCCTTTCCTTAGCAACTTGGGGTCCTCTAAGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTACCTGGGAAGAGAGACTTTGTACGAACGCTTCGTACTCACCAGGCACTGTGGTGTAAATCCCCGGTAAAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGAATTCCATATAAGCAGTTGACAGTTGGGGTCCCCAAGGAGATTTTCCAAAACGAGAAGCGAGTTGCATTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTCCTGCGGGGGTCCAGGCCCTGGTCAAGCAGGGCTTCAATGTTGTCGTGGAATCAGGCGCAGGCGAAGCTTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAGTTCCCAGATGACCTCTACAGAGCAGCAGGGGCCCAGATCCAAGGGATGAAGGAAGTTCTGGCTTCTGATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGTGGTCAAAGTGAGGGCCCCCATGGTGAACCCGACGTTAGGCGCTCACGAAGCTGACTTTTTAAAGCCATCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGAACTCTAATTAGCTTCATCTACCCAGCCCAAAATCCAGACTTGCTCAATAAACTTTCTGAAAGAAAAACCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGTTCTGGCGATGGACCAGGTTCCAAGAGTGACAATAGCTCAGGGCTATGATGCTCTCAGTTCCATGGCCAACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTCTGGTTATAAGGCTGTTGTTTTAGCAGCGAATCATTTTGGGAGGTTTTTCACTGGGCAGATCACAGCTGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGAAAAGTTCCCCCTGCGAAGATCCTGATAGTTGGTGGTGGCGTTGCTGGGCTCGCTTCTGCGGGGGCAGCAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTCGATGGGCGCAGTTGTCCGAGGATTTGATACAAGAGCTGCTGCTTTGGAACAGTTCAAATCCCTTGGTGCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACCCTTGGAGGTTGACTTGAAGGAATCTGGTGAGGGCCAAGGAGGATACGCGAAAGAGATGTCCAAAGAGTTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTGAAGCTGAAATGAAGCTCTTTGCTCAACAGTGCAAGGAGGTGGACATCCTTATCAGCACAGCTCTGATTCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGGTGGTTTTCTGGTGACTCAGAGAATGCTGGACATGTTCAAGCGACCCACGGACCCTCCAGAGTATAATTATC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGTATCTGCTCCCTGGTGGCACCTTCGTAGGTGGATATTTAGCTGCTCTCTACGGTGGCTATAACATCGAAGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATCATGTACCTGGGCTCAGGCTTGTGCTGTGTTGGGGCCCTGGGCGGCCTTTCCACTCAGGGAACAGCTCGACT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CGGCAATGCCTTGGGCATGATCGGGGTTGCAGGAGGCCTGGCAGCCACCCTTGGAGGCCTGAAGCCGGACCCGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGCTGTTAGCTCAGATGTCTGGAGCAATGGCAATGGGTGGCACCATCGGCCTGACGATCGCAAAGCGGATCCAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATTTCCGACTTGCCTCAGTTGGTCGCTGCTTTCCACAGTTTGGTGGGGCTGGCAGCAGTTCTTACCTGCATGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CGAGTACATCGTAGAGTATCCACATTTTGCAATGGATGCCACGTCAAATTTCACCAAGATTGTGGCTTACCTTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCACTTACATCGGCGGAGTCACCTTTAGTGGGTCTCTTGTTGCCTACGGAAAATTACAGGGTATTTTGAAATCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCTCCTCTGCTGCTCCCTGGAAGGCACGCACTCAATGCAGGCCTGCTGGCTGCTAGCGTGGGTGGGATAATCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATTTATGGCTGACCCTAGCTTTACCACGGGCATCACCTGTCTGGGCTCTGTGTCCGCACTCTCTACTCTCATGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGTGACTTTGACGGCTGCTATTGGTGGTGCTGACATGCCTGTCGTCATCACCGTGCTAAACAGCTACTCGGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGGGCTCTGTGTGCCGAGGGCTTCCTGCTCAACAACAACCTGCTGACCATCGTGGGCGCGCTCATCGGCTCCTC 1850
Query 1 ----------------------------------ATGAATCGCTCCCTGGCTAATGTGATTCTTGGAGGCTATG 40
|||||.|||||||||||||||||.||||||||||||||||
Sbjct 1851 TGGTGCAATCCTGTCGTACATCATGTGTGTGGCCATGAACCGCTCCCTGGCTAATGTCATTCTTGGAGGCTATG 1924
Query 41 GCACCACTTCAACAGCTGGTGGAAAACCCATGGAAATTTCTGGCACACATACGGAAATCAACCTTGACAATGCA 114
||||.||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||.|||
Sbjct 1925 GCACAACGTCAACAGCTGGTGGAAAACCCATGGAAATTTCTGGCACACATACAGAAATCAACCTGGACAACGCA 1998
Query 115 ATTGACATGATTCGAGAAGCTAATAGCATTATTATTACACCAGGCTATGGTCTCTGTGCAGCCAAAGCTCAATA 188
.||||.|||||.||.||||||||.||||||.|||||||.|||||.|||||.||||||||.||.||||||||.||
Sbjct 1999 GTTGAGATGATCCGGGAAGCTAACAGCATTGTTATTACTCCAGGGTATGGGCTCTGTGCTGCTAAAGCTCAGTA 2072
Query 189 CCCCATTGCTGATTTGGTAAAGATGCTCACTGAGCAAGGCAAAAAAGTCAGGTTTGGAATTCACCCAGTTGCGG 262
|||||||||.||||||||.||||||||.|||||.||||||||||||||||||||||||||.|||||||||||||
Sbjct 2073 CCCCATTGCCGATTTGGTGAAGATGCTTACTGAACAAGGCAAAAAAGTCAGGTTTGGAATCCACCCAGTTGCGG 2146
Query 263 GCCGAATGCCTGGTCAGCTTAATGTGCTGCTGGCTGAGGCTGGTGTGCCATATGACATTGTGTTGGAAATGGAT 336
||||||||||||||||||||||||||||.|||||.|||||.||.|||||.|||||.||||||||.|||||||||
Sbjct 2147 GCCGAATGCCTGGTCAGCTTAATGTGCTCCTGGCCGAGGCGGGAGTGCCCTATGATATTGTGTTAGAAATGGAT 2220
Query 337 GAGATCAACCATGATTTTCCAGATACTGATTTGGTCCTTGTAATTGGAGCTAATGACACTGTTAATTCAGCAGC 410
|||||||||..||||||||||||.||.||.|||||.|||||.||||||||.||.||||||||.||||||||.||
Sbjct 2221 GAGATCAACAGTGATTTTCCAGACACCGACTTGGTTCTTGTCATTGGAGCAAACGACACTGTGAATTCAGCGGC 2294
Query 411 TCAAGAAGATCCCAACTCTATTATTGCAGGCATGCCAGTCCTTGAGGTCTGGAAATCAAAGCAGGTGATTGTTA 484
|||||||||.|||||.|||||.||||||||||||||.|||||||||||||||||.||.||.|||||.|||||.|
Sbjct 2295 TCAAGAAGACCCCAATTCTATAATTGCAGGCATGCCGGTCCTTGAGGTCTGGAAGTCCAAACAGGTCATTGTCA 2368
Query 485 TGAAGAGGTCTTTGGGTGTTGGCTATGCTGCAGTGGACAATCCAATCTTCTACAAACCTAACACGGCCATGCTT 558
||||||||||..|.||.||||||||.|||||.|||||||||||.||||||||||||||||||||.||.||||||
Sbjct 2369 TGAAGAGGTCCCTTGGCGTTGGCTACGCTGCCGTGGACAATCCGATCTTCTACAAACCTAACACAGCTATGCTT 2442
Query 559 CTAGGTGATGCCAAGAAAACATGTGACGCGCTCCAGGCGAAAGTTAGAGAATCCTATCAGAAG 621
||.||.||.||||||||.|||||||||||.||.|||||.||||||.|.|||||||||||||||
Sbjct 2443 CTGGGGGACGCCAAGAAGACATGTGACGCTCTGCAGGCCAAAGTTCGGGAATCCTATCAGAAG 2505
