Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15790
- Subject:
- NR_145412.1
- Aligned Length:
- 3979
- Identities:
- 920
- Gaps:
- 3051
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGGGGCGTGGCCTGCCCCCGGAGCCCAGGCAGGAGGAGGGTCTTCCTTAAGGAACTGCTGCCAGGACAGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGGATTGCAGTAATTATCACTCTCTGCTAATGAGGACCAGGCCGTGGTTCACTCGAGCCCCGCCCCAGTAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATCTAATTCCAACCGCGGCCCTCTCAGAAGTCGGTCCCCGCCTTTGCGCCTCAGCCTCTCTGGACTCCAGCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCAGAAGTCGGCGCGGCACGGCGTGACCTGCGCAGTGGCGTCCGTTTGTGAAAGAAAATGTCTTTATTTAAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGTGATTGGTGGTCTACTATTCTGGGAGATAAAGAAGAATTTGATCAAGGCTGTTTGTGTCTGGCTAATGTTG 370
Query 1 --------------------------------------------ATGGGATACCTAAGGATCTTTAGCCCCCAT 30
||||||||||||||||||||||||||||||
Sbjct 371 ACAATAGTGGAAATGGACAAGATAAAATAATTGTGGGTAGCTTTATGGGATACCTAAGGATCTTTAGCCCCCAT 444
Query 31 CCTGCAAAAACAGGAGATGGAGCTCAAGCCGAAGATTTGCTTCTAGAAGTGGATCTACGAGATCCAGTACTTCA 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCTGCAAAAACAGGAGATGGAGCTCAAGCCGAAGATTTGCTTCTAGAAGTGGATCTACGAGATCCAGTACTTCA 518
Query 105 AGTGGAAGTAGGAAAGTTTGTTTCAGGTACCGAAATGCTACATTTGGCTGTGTTACATTCTAGAAAACTTTGTG 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGTGGAAGTAGGAAAGTTTGTTTCAGGTACCGAAATGCTACATTTGGCTGTGTTACATTCTAGAAAACTTTGTG 592
Query 179 TCTACTCTGTCTCAGGAACCTTGGGTAATGTGGAACATGGGAACCAATGTCAGATGAAATTGATGTATGAACAT 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCTACTCTGTCTCAGGAACCTTGGGTAATGTGGAACATGGGAACCAATGTCAGATGAAATTGATGTATGAACAT 666
Query 253 AATCTTCAGAGAACAGCCTGCAATATGACCTATGGATCATTTGGTGGTGTAAAAGGTCGAGATTTAATTTGCAT 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AATCTTCAGAGAACAGCCTGCAATATGACCTATGGATCATTTGGTGGTGTAAAAGGTCGAGATTTAATTTGCAT 740
Query 327 CCAGTCTATGGATGGGATGCTGATGGTATTTGAGCAGGAGAGCTATGCTTTTGGAAGATTTCTCCCTGGCTTTC 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAGTCTATGGATGGGATGCTGATGGTATTTGAGCAGGAGAGCTATGCTTTTGGAAGATTTCTCCCTGGCTTTC 814
Query 401 TTCTGCCTGGTCCTCTTGCCTACAGTTCCCGTACAGATTCCTTCCTTACTGTCTCTTCCTGCCAACAAGTGGAA 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTCTGCCTGGTCCTCTTGCCTACAGTTCCCGTACAGATTCCTTCCTTACTGTCTCTTCCTGCCAACAAGTGGAA 888
Query 475 AGTTATAAGTACCAGGTACTTGCTTTTGCAACAGATGCAGATAAAAGGCAGGAGACTGAACAGCAAAAACTTGG 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGTTATAAGTACCAGGTACTTGCTTTTGCAACAGATGCAGATAAAAGGCAGGAGACTGAACAGCAAAAACTTGG 962
Query 549 TTCTGGAAAAAGACTAGTTGTGGATTGGACTCTAAATATTGGAGAGCAAGCCCTTGACATATGTATTGTCTCTT 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTCTGGAAAAAGACTAGTTGTGGATTGGACTCTAAATATTGGAGAGCAAGCCCTTGACATATGTATTGTCTCTT 1036
Query 623 TCAATCAGTCGGCATCCTCTGTTTTTGTTCTTGGTGAGAGAAACTTTTTTTGCCTTAAGGATAATGGACAAATT 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCAATCAGTCGGCATCCTCTGTTTTTGTTCTTGGTGAGAGAAACTTTTTTTGCCTTAAGGATAATGGACAAATT 1110
Query 697 CGATTCATGAAGAAGCTTGATTGGAGCCCAAGTTGTTTTCTGCCATATTGCTCAGTTTCTGAAGGAACAATAAA 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CGATTCATGAAGAAGCTTGATTGGAGCCCAAGTTGTTTTCTGCCATATTGCTCAGTTTCTGAAGGAACAATAAA 1184
Query 771 TACTTTGATTGGAAATCATAATAACATGCTGCATATTTATCAAGATGTGACACTGAAGTGGGCCACCCAACTTC 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TACTTTGATTGGAAATCATAATAACATGCTGCATATTTATCAAGATGTGACACTGAAGTGGGCCACCCAACTTC 1258
Query 845 CCCACATTCCTGTAGCAGTAAGAGTGGGCTGTTTGCA--ATTT------------------TCT------TTAT 892
||||||||||||||||||||||||||||||||||||| |||| ||| |.||
Sbjct 1259 CCCACATTCCTGTAGCAGTAAGAGTGGGCTGTTTGCATGATTTAAAGGGAGTGATAGTCACTCTGAGTGATGAT 1332
Query 893 GGAAGCATTTG--------TTGCCT------CGATC--------TTCCA-----------------CTTTAGAA 927
|| .||.||| .|.||| .|||| ||||| ||..||||
Sbjct 1333 GG--TCACTTGCAGTGTTCATACCTGGGGACAGATCCTTCTCTGTTCCAAGCTCCAAACGTTCAATCTCGAGAA 1404
Query 928 --AAA--------------------------------------------------------------------- 930
|||
Sbjct 1405 CTAAACTATGATGAACTTGATGTAGAAATGAAAGAACTTCAGAAAATCATCAAAGATGTTAACAAATCACAAGG 1478
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1479 TGTTTGGCCCATGACTGAGAGAGAAGATGACTTGAACGTTTCTGTCGTGGTTTCTCCTAACTTTGATTCAGTTT 1552
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1553 CTCAAGCGACCGATGTTGAGGTGGGAACTGACCTTGTCCCTTCTGTCACGGTGAAGGTCACACTGCAGAACAGA 1626
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1627 GTGATATTGCAAAAAGCCAAATTATCAGTCTACGTGCAACCACCATTAGAATTGACTTGTGATCAGTTCACCTT 1700
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1701 TGAATTTATGATTTTCTCATCATAATAAATGAGGACAATAATAGTATCAACCTCACAGGTTTGTTGTGAAGATT 1774
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1775 TAAAGAGTTACTTCATGTAAGTGCTTATGACAGTACCTGGCATGTGGTGAGTGCTTATTAAATTTTAACTGTTG 1848
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1849 TTAATAACAGTTGCCCCAAATTATGTAATTTATATTATTTTTACATTGCTTATAGCACCAGATTTGACTAGAAC 1922
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1923 AGTAAGCTTTTCTGTTTATCTGAAAAGAAGTTATACACCATCAGAATTGGAAGGAAATGCTGTTGTTTCTTATT 1996
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1997 CCAGACCAACAGATCGAAATCCTGATGGCATTCCGCGAGTTATCCAATGTAAATTTAGACTTCCCCTAAAGTTA 2070
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2071 ATTTGCCTACCAGGTCAGCCTTCAAAAACTGCAAGCCACAAAATTACTATTGATACCAACAAATCTCCAGTCAG 2144
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2145 TCTTCTTAGTCTCTTCCCAGGTTTTGCCAGTCAGTCAGATGATGATCAGGTGAATGTAATGGGTTTTCACTTCT 2218
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2219 TAGGAGGTGCTCGAATTACTGTTCTTGCTTCCAAAACTTCTCAACGATATCGCATTCAGAGTGAACAATTTGAA 2292
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2293 GATCTTTGGCTCATAACCAATGAGCTTATTCTTCGCCTTCAAGAATATTTTGAAAAACAGGGAGTCAAAGATTT 2366
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2367 TGCATGTTCTTTTTCGGGATCTATACCCCTTCAAGAATATTTTGAGTTGATTGATCATCATTTTGAGCTACGGA 2440
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2441 TAAATGGTGAAAAATTAGAAGAACTCTTATCTGAGAGAGCTGTACAATTTCGGGCCATTCAACGCCGGCTACTA 2514
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2515 GCAAGATTCAAAGATAAAACTCCTGCCCCTCTTCAACACCTGGACACCTTGTTAGATGGAACCTACAAGCAGGT 2588
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2589 AATTGCTCTAGCAGATGCAGTGGAGGAAAACCAAGGCAATCTGTTCCAGTCATTCACCAGGCTGAAGAGTGCCA 2662
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2663 CCCATTTGGTGATTCTGCTGATCGCGCTGTGGCAGAAGCTTAGTGCTGACCAGGTTGCTATTCTGGAAGCGGCA 2736
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2737 TTTCTGCCGCTACAAGAAGACACTCAAGAATTGGGCTGGGAAGAAACGGTGGATGCCGCCATTTCCCACCTGTT 2810
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2811 GAAGACTTGCCTGTCGAAGAGTTCTAAGGAGCAGGCTTTGAACCTCAACAGCCAGCTGAACATACCCAAAGACA 2884
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2885 CAAGCCAACTGAAGAAACATATCACCTTGCTCTGCGATAGATTATCCAAAGGTGGCCGTCTCTGCCTAAGTACC 2958
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2959 GATGCAGCAGCCCCACAGACCATGGTCATGCCAGGTGGTTGTACTACAATCCCAGAGTCAGACCTAGAAGAAAG 3032
Query 931 -------------------------------------------------------------------------- 930
Sbjct 3033 ATCAGTAGAACAAGACTCTACAGAACTGTTTACCAACCACAGACATCTCACTGCAGAGACACCCAGGCCTGAAG 3106
Query 931 -------------------------------------------------------------------------- 930
Sbjct 3107 TTTCACCCCTCCAAGGAGTCTCGGAATAATTCAAGTAGAGTTGTTTGGTTGAGAGGAACATCCCCATCTCAAGG 3180
Query 931 -------------------------------------------------------------------------- 930
Sbjct 3181 CCGAACCTGTGTGAACCTCATGCCAAGCACAGATATAGGGCTGGCGCAGGTGCTTCCTAAAGCTCACCTTCCTG 3254
Query 931 -------------------------------------------------------------------------- 930
Sbjct 3255 GAGATGACATGCATAGAAAGAGGGGTTGGGACTTTTTACTTCACTAGGAGAACTTGTAACACCATGGGGAAGTC 3328
Query 931 -------------------------------------------------------------------------- 930
Sbjct 3329 AGCTGAAACTTGTCTTGTTTTGCCAGGAAAGGAAGTAGTTGCCTTTGGTCATCCATCTGCTAATAGTCACAGAA 3402
Query 931 -------------------------------------------------------------------------- 930
Sbjct 3403 TACAGTGAAATGACATAGTTTTGGGTTAGATTTTATAATGCAAAGATTCAGATCCAAAATAATTTCATACCCCA 3476
Query 931 -------------------------------------------------------------------------- 930
Sbjct 3477 TTTTTTCACAGAATTCTTATATAGTAAATGTATCAAGTTTAATAAAGCATCTCATTGTCAAATAATATCTTGGA 3550
Query 931 -------------------------------------------------------------------------- 930
Sbjct 3551 TTTTATTTATAATTAGAGGGATTTATGAGTGATTGCTCTACATTATTTCTTCAAAGGAAAGGAAAGGAATTGAA 3624
Query 931 -------------------------------------------------------------------------- 930
Sbjct 3625 GACTTTGCTACTCTCTGGTAAGACTTGAATGTGATTATTTTATAAATAAAAGAACCACTATGAAACTTTCATGT 3698
Query 931 -------------------------------------------------------------------------- 930
Sbjct 3699 GATTTGTTCTATTAAGCTAAACGTGGAAGAAGGGAAGTTTTCTAGTATTGTATGAAAATGTTTAAATATTTTCA 3772
Query 931 -------------------------------------------------------------------------- 930
Sbjct 3773 AGGAAGCTAGTACATTAACATCCCCTTTTCATTACCCCATTGGGTGGCACCTTTTAAAAATCCAGGTTATTAAA 3846
Query 931 -------------------------------------------------------------------------- 930
Sbjct 3847 GGATTCACACTTTATTACAGTTAAAATTTAAGGTTTTTATGTGTAAGAAGTGAAAGAAACTTTGCTAATTTCAA 3920
Query 931 --------------------------------------------------------- 930
Sbjct 3921 GTTCGAATTACAGTTGTGAGATTGATTTATTTAAATAAAAATATGCCTTTGCCAGTT 3977
