Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15790
- Subject:
- XM_011515269.2
- Aligned Length:
- 2591
- Identities:
- 782
- Gaps:
- 1801
Alignment
Query 1 ATGGGATACCTAAGGATCTTTAGCCCCCATCCTGCAAAAACAGGAGATGGAGCTCAAGCCGAAGATTTGCTTCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGAAGTGGATCTACGAGATCCAGTACTTCAAGTGGAAGTAGGAAAGTTTGTTTCAGGTACCGAAATGCTACATT 148
||||||||||
Sbjct 1 ----------------------------------------------------------------ATGCTACATT 10
Query 149 TGGCTGTGTTACATTCTAGAAAACTTTGTGTCTACTCTGTCTCAGGAACCTTGGGTAATGTGGAACATGGGAAC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11 TGGCTGTGTTACATTCTAGAAAACTTTGTGTCTACTCTGTCTCAGGAACCTTGGGTAATGTGGAACATGGGAAC 84
Query 223 CAATGTCAGATGAAATTGATGTATGAACATAATCTTCAGAGAACAGCCTGCAATATGACCTATGGATCATTTGG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 85 CAATGTCAGATGAAATTGATGTATGAACATAATCTTCAGAGAACAGCCTGCAATATGACCTATGGATCATTTGG 158
Query 297 TGGTGTAAAAGGTCGAGATTTAATTTGCATCCAGTCTATGGATGGGATGCTGATGGTATTTGAGCAGGAGAGCT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 159 TGGTGTAAAAGGTCGAGATTTAATTTGCATCCAGTCTATGGATGGGATGCTGATGGTATTTGAGCAGGAGAGCT 232
Query 371 ATGCTTTTGGAAGATTTCTCCCTGGCTTTCTTCTGCCTGGTCCTCTTGCCTACAGTTCCCGTACAGATTCCTTC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 233 ATGCTTTTGGAAGATTTCTCCCTGGCTTTCTTCTGCCTGGTCCTCTTGCCTACAGTTCCCGTACAGATTCCTTC 306
Query 445 CTTACTGTCTCTTCCTGCCAACAAGTGGAAAGTTATAAGTACCAGGTACTTGCTTTTGCAACAGATGCAGATAA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 307 CTTACTGTCTCTTCCTGCCAACAAGTGGAAAGTTATAAGTACCAGGTACTTGCTTTTGCAACAGATGCAGATAA 380
Query 519 AAGGCAGGAGACTGAACAGCAAAAACTTGGTTCTGGAAAAAGACTAGTTGTGGATTGGACTCTAAATATTGGAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 381 AAGGCAGGAGACTGAACAGCAAAAACTTGGTTCTGGAAAAAGACTAGTTGTGGATTGGACTCTAAATATTGGAG 454
Query 593 AGCAAGCCCTTGACATATGTATTGTCTCTTTCAATCAGTCGGCATCCTCTGTTTTTGTTCTTGGTGAGAGAAAC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 AGCAAGCCCTTGACATATGTATTGTCTCTTTCAATCAGTCGGCATCCTCTGTTTTTGTTCTTGGTGAGAGAAAC 528
Query 667 TTTTTTTGCCTTAAGGATAATGGACAAATTCGATTCATGAAGAAGCTTGATTGGAGCCCAAGTTGTTTTCTGCC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 TTTTTTTGCCTTAAGGATAATGGACAAATTCGATTCATGAAGAAGCTTGATTGGAGCCCAAGTTGTTTTCTGCC 602
Query 741 ATATTGCTCAGTTTCTGAAGGAACAATAAATACTTTGATTGGAAATCATAATAACATGCTGCATATTTATCAAG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 ATATTGCTCAGTTTCTGAAGGAACAATAAATACTTTGATTGGAAATCATAATAACATGCTGCATATTTATCAAG 676
Query 815 ATGTGACACTGAAGTGGGCCACCCAACTTCCCCACATTCCTGTAGCAGTAAGAGTGGGCTGTTTGCA--ATTT- 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 677 ATGTGACACTGAAGTGGGCCACCCAACTTCCCCACATTCCTGTAGCAGTAAGAGTGGGCTGTTTGCATGATTTA 750
Query 886 -----------------TCT------TTATGGAAGCATTTG--------TTGCCT------CGATC-------- 914
||| |.|||| .||.||| .|.||| .||||
Sbjct 751 AAGGGAGTGATAGTCACTCTGAGTGATGATGG--TCACTTGCAGTGTTCATACCTGGGGACAGATCCTTCTCTG 822
Query 915 TTCCA-----------------CTTTAGAA--AAA--------------------------------------- 930
||||| ||..|||| |||
Sbjct 823 TTCCAAGCTCCAAACGTTCAATCTCGAGAACTAAACTATGATGAACTTGATGTAGAAATGAAAGAACTTCAGAA 896
Query 931 -------------------------------------------------------------------------- 930
Sbjct 897 AATCATCAAAGATGTTAACAAATCACAAGGTGTTTGGCCCATGACTGAGAGAGAAGATGACTTGAACGTTTCTG 970
Query 931 -------------------------------------------------------------------------- 930
Sbjct 971 TCGTGGTTTCTCCTAACTTTGATTCAGTTTCTCAAGCGACCGATGTTGAGGTGGGAACTGACCTTGTCCCTTCT 1044
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1045 GTCACGGTGAAGGTCACACTGCAGAACAGAGTGATATTGCAAAAAGCCAAATTATCAGTCTACGTGCAACCACC 1118
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1119 ATTAGAATTGACTTGTGATCAGTTCACCTTTGAATTTATGACACCAGATTTGACTAGAACAGTAAGCTTTTCTG 1192
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1193 TTTATCTGAAAAGAAGTTATACACCATCAGAATTGGAAGGAAATGCTGTTGTTTCTTATTCCAGACCAACAGAT 1266
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1267 CGAAATCCTGATGGCATTCCGCGAGTTATCCAATGTAAATTTAGACTTCCCCTAAAGTTAATTTGCCTACCAGG 1340
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1341 TCAGCCTTCAAAAACTGCAAGCCACAAAATTACTATTGATACCAACAAATCTCCAGTCAGTCTTCTTAGTCTCT 1414
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1415 TCCCAGGTTTTGCCAGTCAGTCAGATGATGATCAGGTGAATGTAATGGGTTTTCACTTCTTAGGAGGTGCTCGA 1488
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1489 ATTACTGTTCTTGCTTCCAAAACTTCTCAACGATATCGCATTCAGAGTGAACAATTTGAAGATCTTTGGCTCAT 1562
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1563 AACCAATGAGCTTATTCTTCGCCTTCAAGAATATTTTGAAAAACAGGGAGTCAAAGATTTTGCATGTTCTTTTT 1636
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1637 CGGGATCTATACCCCTTCAAGAATATTTTGAGTTGATTGATCATCATTTTGAGCTACGGATAAATGGTGAAAAA 1710
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1711 TTAGAAGAACTCTTATCTGAGAGAGCTGTACAATTTCGGGCCATTCAACGCCGGCTACTAGCAAGATTCAAAGA 1784
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1785 TAAAACTCCTGCCCCTCTTCAACACCTGGACACCTTGTTAGATGGAACCTACAAGCAGGTAATTGCTCTAGCAG 1858
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1859 ATGCAGTGGAGGAAAACCAAGGCAATCTGTTCCAGTCATTCACCAGGCTGAAGAGTGCCACCCATTTGGTGATT 1932
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1933 CTGCTGATCGCGCTGTGGCAGAAGCTTAGTGCTGACCAGGTTGCTATTCTGGAAGCGGCATTTCTGCCGCTACA 2006
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2007 AGAAGACACTCAAGAATTGGGCTGGGAAGAAACGGTGGATGCCGCCATTTCCCACCTGTTGAAGACTTGCCTGT 2080
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2081 CGAAGAGTTCTAAGGAGCAGGCTTTGAACCTCAACAGCCAGCTGAACATACCCAAAGACACAAGCCAACTGAAG 2154
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2155 AAACATATCACCTTGCTCTGCGATAGATTATCCAAAGGTGGCCGTCTCTGCCTAAGTACCGATGCAGCAGCCCC 2228
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2229 ACAGACCATGGTCATGCCAGGTGGTTGTACTACAATCCCAGAGTCAGACCTAGAAGAAAGATCAGTAGAACAAG 2302
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2303 ACTCTACAGAACTGTTTACCAACCACAGACATCTCACTGCAGAGACACCCAGGCCTGACCCCAGGACTGGACAG 2376
Query 931 -------------------------------------------------------------------------- 930
Sbjct 2377 AGGATCGAGGCCTGGACCCTAAGAATACCCCACTCCCTGAGCCAGCATCTCCAGCTGATGGAGGGACCCAAAAG 2450
Query 931 - 930
Sbjct 2451 C 2451
