Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15790
Subject:
XM_011515269.2
Aligned Length:
2591
Identities:
782
Gaps:
1801

Alignment

Query    1  ATGGGATACCTAAGGATCTTTAGCCCCCATCCTGCAAAAACAGGAGATGGAGCTCAAGCCGAAGATTTGCTTCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGAAGTGGATCTACGAGATCCAGTACTTCAAGTGGAAGTAGGAAAGTTTGTTTCAGGTACCGAAATGCTACATT  148
                                                                            ||||||||||
Sbjct    1  ----------------------------------------------------------------ATGCTACATT  10

Query  149  TGGCTGTGTTACATTCTAGAAAACTTTGTGTCTACTCTGTCTCAGGAACCTTGGGTAATGTGGAACATGGGAAC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   11  TGGCTGTGTTACATTCTAGAAAACTTTGTGTCTACTCTGTCTCAGGAACCTTGGGTAATGTGGAACATGGGAAC  84

Query  223  CAATGTCAGATGAAATTGATGTATGAACATAATCTTCAGAGAACAGCCTGCAATATGACCTATGGATCATTTGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   85  CAATGTCAGATGAAATTGATGTATGAACATAATCTTCAGAGAACAGCCTGCAATATGACCTATGGATCATTTGG  158

Query  297  TGGTGTAAAAGGTCGAGATTTAATTTGCATCCAGTCTATGGATGGGATGCTGATGGTATTTGAGCAGGAGAGCT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  159  TGGTGTAAAAGGTCGAGATTTAATTTGCATCCAGTCTATGGATGGGATGCTGATGGTATTTGAGCAGGAGAGCT  232

Query  371  ATGCTTTTGGAAGATTTCTCCCTGGCTTTCTTCTGCCTGGTCCTCTTGCCTACAGTTCCCGTACAGATTCCTTC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  233  ATGCTTTTGGAAGATTTCTCCCTGGCTTTCTTCTGCCTGGTCCTCTTGCCTACAGTTCCCGTACAGATTCCTTC  306

Query  445  CTTACTGTCTCTTCCTGCCAACAAGTGGAAAGTTATAAGTACCAGGTACTTGCTTTTGCAACAGATGCAGATAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  307  CTTACTGTCTCTTCCTGCCAACAAGTGGAAAGTTATAAGTACCAGGTACTTGCTTTTGCAACAGATGCAGATAA  380

Query  519  AAGGCAGGAGACTGAACAGCAAAAACTTGGTTCTGGAAAAAGACTAGTTGTGGATTGGACTCTAAATATTGGAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  381  AAGGCAGGAGACTGAACAGCAAAAACTTGGTTCTGGAAAAAGACTAGTTGTGGATTGGACTCTAAATATTGGAG  454

Query  593  AGCAAGCCCTTGACATATGTATTGTCTCTTTCAATCAGTCGGCATCCTCTGTTTTTGTTCTTGGTGAGAGAAAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  455  AGCAAGCCCTTGACATATGTATTGTCTCTTTCAATCAGTCGGCATCCTCTGTTTTTGTTCTTGGTGAGAGAAAC  528

Query  667  TTTTTTTGCCTTAAGGATAATGGACAAATTCGATTCATGAAGAAGCTTGATTGGAGCCCAAGTTGTTTTCTGCC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  529  TTTTTTTGCCTTAAGGATAATGGACAAATTCGATTCATGAAGAAGCTTGATTGGAGCCCAAGTTGTTTTCTGCC  602

Query  741  ATATTGCTCAGTTTCTGAAGGAACAATAAATACTTTGATTGGAAATCATAATAACATGCTGCATATTTATCAAG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  603  ATATTGCTCAGTTTCTGAAGGAACAATAAATACTTTGATTGGAAATCATAATAACATGCTGCATATTTATCAAG  676

Query  815  ATGTGACACTGAAGTGGGCCACCCAACTTCCCCACATTCCTGTAGCAGTAAGAGTGGGCTGTTTGCA--ATTT-  885
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| 
Sbjct  677  ATGTGACACTGAAGTGGGCCACCCAACTTCCCCACATTCCTGTAGCAGTAAGAGTGGGCTGTTTGCATGATTTA  750

Query  886  -----------------TCT------TTATGGAAGCATTTG--------TTGCCT------CGATC--------  914
                             |||      |.||||  .||.|||        .|.|||      .||||        
Sbjct  751  AAGGGAGTGATAGTCACTCTGAGTGATGATGG--TCACTTGCAGTGTTCATACCTGGGGACAGATCCTTCTCTG  822

Query  915  TTCCA-----------------CTTTAGAA--AAA---------------------------------------  930
            |||||                 ||..||||  |||                                       
Sbjct  823  TTCCAAGCTCCAAACGTTCAATCTCGAGAACTAAACTATGATGAACTTGATGTAGAAATGAAAGAACTTCAGAA  896

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct  897  AATCATCAAAGATGTTAACAAATCACAAGGTGTTTGGCCCATGACTGAGAGAGAAGATGACTTGAACGTTTCTG  970

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct  971  TCGTGGTTTCTCCTAACTTTGATTCAGTTTCTCAAGCGACCGATGTTGAGGTGGGAACTGACCTTGTCCCTTCT  1044

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1045  GTCACGGTGAAGGTCACACTGCAGAACAGAGTGATATTGCAAAAAGCCAAATTATCAGTCTACGTGCAACCACC  1118

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1119  ATTAGAATTGACTTGTGATCAGTTCACCTTTGAATTTATGACACCAGATTTGACTAGAACAGTAAGCTTTTCTG  1192

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1193  TTTATCTGAAAAGAAGTTATACACCATCAGAATTGGAAGGAAATGCTGTTGTTTCTTATTCCAGACCAACAGAT  1266

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1267  CGAAATCCTGATGGCATTCCGCGAGTTATCCAATGTAAATTTAGACTTCCCCTAAAGTTAATTTGCCTACCAGG  1340

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1341  TCAGCCTTCAAAAACTGCAAGCCACAAAATTACTATTGATACCAACAAATCTCCAGTCAGTCTTCTTAGTCTCT  1414

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1415  TCCCAGGTTTTGCCAGTCAGTCAGATGATGATCAGGTGAATGTAATGGGTTTTCACTTCTTAGGAGGTGCTCGA  1488

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1489  ATTACTGTTCTTGCTTCCAAAACTTCTCAACGATATCGCATTCAGAGTGAACAATTTGAAGATCTTTGGCTCAT  1562

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1563  AACCAATGAGCTTATTCTTCGCCTTCAAGAATATTTTGAAAAACAGGGAGTCAAAGATTTTGCATGTTCTTTTT  1636

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1637  CGGGATCTATACCCCTTCAAGAATATTTTGAGTTGATTGATCATCATTTTGAGCTACGGATAAATGGTGAAAAA  1710

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1711  TTAGAAGAACTCTTATCTGAGAGAGCTGTACAATTTCGGGCCATTCAACGCCGGCTACTAGCAAGATTCAAAGA  1784

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1785  TAAAACTCCTGCCCCTCTTCAACACCTGGACACCTTGTTAGATGGAACCTACAAGCAGGTAATTGCTCTAGCAG  1858

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1859  ATGCAGTGGAGGAAAACCAAGGCAATCTGTTCCAGTCATTCACCAGGCTGAAGAGTGCCACCCATTTGGTGATT  1932

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 1933  CTGCTGATCGCGCTGTGGCAGAAGCTTAGTGCTGACCAGGTTGCTATTCTGGAAGCGGCATTTCTGCCGCTACA  2006

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 2007  AGAAGACACTCAAGAATTGGGCTGGGAAGAAACGGTGGATGCCGCCATTTCCCACCTGTTGAAGACTTGCCTGT  2080

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 2081  CGAAGAGTTCTAAGGAGCAGGCTTTGAACCTCAACAGCCAGCTGAACATACCCAAAGACACAAGCCAACTGAAG  2154

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 2155  AAACATATCACCTTGCTCTGCGATAGATTATCCAAAGGTGGCCGTCTCTGCCTAAGTACCGATGCAGCAGCCCC  2228

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 2229  ACAGACCATGGTCATGCCAGGTGGTTGTACTACAATCCCAGAGTCAGACCTAGAAGAAAGATCAGTAGAACAAG  2302

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 2303  ACTCTACAGAACTGTTTACCAACCACAGACATCTCACTGCAGAGACACCCAGGCCTGACCCCAGGACTGGACAG  2376

Query  931  --------------------------------------------------------------------------  930
                                                                                      
Sbjct 2377  AGGATCGAGGCCTGGACCCTAAGAATACCCCACTCCCTGAGCCAGCATCTCCAGCTGATGGAGGGACCCAAAAG  2450

Query  931  -  930
             
Sbjct 2451  C  2451

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