Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15801
- Subject:
- XR_001748672.2
- Aligned Length:
- 3203
- Identities:
- 321
- Gaps:
- 2882
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AACCGTTGCCAAGGAGCTCGACTCTGGGAGCGGTCTAGAGCCCGGGCGCCTCCTGGGGGGTGGGGAAACGGTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGTGAGGAGAATTTGAGTTAAAATTATAAGACCTAATTATGAGTGATCAAATTAAATTCATTATGGACAGTCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATAAGGAGCCCTTTAGGAAGAACTATAATTTAATCACGTTTGATTCCTTGGAGCCAATGCAACTATTACAAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTCAGTGATGTTCTGGCTGAGATTGACCCAAAGCAACTTGTGGATATCAGAGAGGAGATGCCAGAGCAGACAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAAACGAATGTTGAGCCTTCTTGGTATTCTTAAGTACAAACCTTCAGGAAATGCCACAGATATGAGTACTTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTCAGGGTTTGGTGATTGGAAGTAAACCTGTAATTTACCCAGTGCTCCACTGGCTTCTTCAGAGGACTAATGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTGAAGAAAAGAGCATATTTAGCTCGTTTTTTAATAAAACTTGAGGTACCAAGTGAGTTTCTTCAGGATGAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGTGGCTGACACCAATAAACAGTATGAAGAGTTAATGGAAGCCTTTAAAACTTTGCATAAAGAATATGAGCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTCAAGATATCTGGATTTTCTACAGCAGAAATAAGAAAGGATATCAGTGCAATGGAAGAAGAAAAGGATCAGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATTAAGAGAGTTGAACATTTGAAGAAAAGGGTTGAGACAGCTCAGAATCATCAATGGATGCTTAAAATAGCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCAACTTCGAGTTGAAAAAGAGAGAGAAGAATATCTTGCACAACAGAAACAGGAACAAAAGAATCAGCTATTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CATGCAGTGCAAAGATTGCAAAGAGTACAAAACCAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGCAAAGCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGAAAGTTTAATGAAGAGGCTAGAGGAGGAGATAAAATTTAATTTATATATGGTAACTGAAAAATTTCCTAAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATTAGAAAATAAGAAAAAGGAATTACATTTTTTACAAAAAGTAGTTTCAGAGCCAGCTATGGGCCATTCTGAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTTCTTGAACTTGAATCTAAAATAAATGAAATAAACACAGAAATTAACCAGTTGATTGAAAAGAAAATGATGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAATGAGCCCATTGAAGGCAAACTCTCACTGTATAGGCAACAGATGGAGTCTCACTCTGTCACCCAGGCTGGAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGCAGTGGTACAATCTCGGCTCACTGCAGCCTCTGCCTCCCAGGTTCAAGGAATTCTCCTGCCTCAGCCTCTCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTATCTGGGACCACAGGCATCTATCATTTCCCGTAAAAAAGAAGCCAAAGCTGAGGAACTTCAGGAGGCCAAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGAGAAATCAGACCCGTGAATTTGATGGTACTGAAGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTAAAGGGAGATGAGAGACAGGATCTCACTCTGTCACCCAGGCTGGAGTGCGGTGGTGTGATCATGGCTTACT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCAGCCTGAAACTCCTAGGCTCAAGTGATCCTCCTACCTCAGCCTCCTGAGAAGCTCGGACTACAGGCACGAGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACCATGCCCAGCTAATTTTCTTTTTTTGTTTTGTTTTGTAGAGATGTGGTCTCACTATGTTTCCCAGGCTGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTTAAACTCCCGGCCTCAAGCAGTCCTCCCACTTCGGCCTCCTGAAGTGTTAGGATTACAGGCGTGAGCCTGCG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGGCTGTAATTACTATACCCAGTTTTTACAGATAAAGGATCTGAGACATGCAGAGGTTTTAAGCTGACTTGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTGACACCCCATTGCTATTCAAACGATATGTCAATAAACTTCGAAGCAAGAGTACAGTTTTCAAAAAGAAGCAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAGATAATAGCTGAACTTAAAGCTGAATTCGGTCTTTTGCAGAGGACTGAAGAACTTCTTAAGCAACGTCATGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAATATTCAACAACAACTGCAAACTATGGAGGAGAAAAAGGGTATATCTGGATATAGTTACACCCAAGAAGAGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TAGAAAGAGTATCTGCACTGAAGAGTGAAGTTGATGAAATGAAAGGACGAACATTGGATGATATGTCTGAAATG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTGAAAAAACTGTATTCATTGGTATCTGAAAAGAAGTCAGCTCTTGCCTCAGTTATAAAAGAGCTACGACAGTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCGTCAAAAATATCAAGAACTGACCCAGGAGTGTGATGAAAAGAAATCCCAGTATGATAGCTGTGCAGCAGGCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCGAAAGCAATCGGTCCAAATTAGAACAGGAAGTTAGAAGACTCCGTGAAGAATGTCTTCAAGAAGAAAGTAGA 2294
Query 1 ------------------ATGATTAAGAACCTAGAAGTTCAACTTCGTCGTGCTACTGATGAGATGAAGGCATA 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TACCATTATACAAATTGTATGATTAAGAACCTAGAAGTTCAACTTCGTCGTGCTACTGATGAGATGAAGGCATA 2368
Query 57 TATCTCTTCTGATCAACAAGAAAAAAGAAAGGCAATTAGGGAACAGTATACCAAAAATACTGCTGAACAAGAAA 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TATCTCTTCTGATCAACAAGAAAAAAGAAAGGCAATTAGGGAACAGTATACCAAAAATACTGCTGAACAAGAAA 2442
Query 131 ACCTTGGAAAGAAACTTCGGGAAAAACAAAAAGTTATACGAGAAAGTCATGGTCCAAATATGAAACAAGCAAAA 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 ACCTTGGAAAGAAACTTCGGGAAAAACAAAAAGTTATACGAGAAAGTCATGGTCCAAATATGAAACAAGCAAAA 2516
Query 205 ATGTGGCGTGATTTGGAACAATTAATGGAATGTAAGAAACAGTGCTTTCTGAAACAACAAAGCCAAACTTCCAT 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 ATGTGGCGTGATTTGGAACAATTAATGGAATGTAAGAAACAGTGCTTTCTGAAACAACAAAGCCAAACTTCCAT 2590
Query 279 TGGTCAGGTAATTCAGGAGGGTGGGGAGGACCGGCTAATACTG------------------------------- 321
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 TGGTCAGGTAATTCAGGAGGGTGGGGAGGACCGGCTAATACTGTGAATTCTTGTGTCATCGTTTGGGGTTTTAC 2664
Query 322 -------------------------------------------------------------------------- 321
Sbjct 2665 TTGATACCACTAGCTATAAGCCTAATCTCATAATGTATTTCTTTTTTGAAACTGATTTGTATAGCATTTTGTTT 2738
Query 322 -------------------------------------------------------------------------- 321
Sbjct 2739 TCAGAAGAGCCATTCTTTATTAAGTTTTCATAGAAAATAATGTTAAGGTAGATTTAGTTTGAATGTTTTTTCAT 2812
Query 322 -------------------------------------------------------------------------- 321
Sbjct 2813 ATGAAAAAGAGGCTTTTATTCTTTTCCATAGTTTAGACATCACTGGCGTCTTCTGAGTTTTATGAGACAGGAAA 2886
Query 322 -------------------------------------------------------------------------- 321
Sbjct 2887 CTAAGTTTACTATCTGTAAATGTAAACATATGTCCATTAAGAAACATGTAGTTTTTTTTTAGAATGTAATAACC 2960
Query 322 -------------------------------------------------------------------------- 321
Sbjct 2961 CAGTGGCTTACTGTTTTTCTTAATCTCTTTTAAAAAAACTTTAGAAGAATCTTTTAGGAACTAATATCTCTTGT 3034
Query 322 -------------------------------------------------------------------------- 321
Sbjct 3035 TCTGAAGAAACATTTATCTGACGTTCAGCAGTTCCTACAGTTTTACTTCAGTTTATTTTTCTTCTGTAAAATGC 3108
Query 322 -------------------------------------------------------------------------- 321
Sbjct 3109 AAGAAAATTTAATATTTTGACTAACATGTCTTTTCTGTTTGTATCATTTAAAGGCAAATAAACTTGGTACGTAT 3182
Query 322 --------------------- 321
Sbjct 3183 TTCATATCTATTTAAAAAATG 3203
