Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15801
- Subject:
- XR_429093.3
- Aligned Length:
- 2711
- Identities:
- 321
- Gaps:
- 2390
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AACCGTTGCCAAGGAGCTCGACTCTGGGAGCGGTCTAGAGCCCGGGCGCCTCCTGGGGGGTGGGGAAACGGTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGTGAGGAGAATTTGAGTTAAAATTATAAGACCTAATTATGAGTGATCAAATTAAATTCATTATGGACAGTCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATAAGGAGCCCTTTAGGAAGAACTATAATTTAATCACGTTTGATTCCTTGGAGCCAATGCAACTATTACAAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTCAGTGATGTTCTGGCTGAGATTGACCCAAAGCAACTTGTGGATATCAGAGAGGAGATGCCAGAGCAGACAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAAACGAATGTTGAGCCTTCTTGGTATTCTTAAGTACAAACCTTCAGGAAATGCCACAGATATGAGTACTTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTCAGGGTTTGGTGATTGGAAGTAAACCTGTAATTTACCCAGTGCTCCACTGGCTTCTTCAGAGGACTAATGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTGAAGAAAAGAGCATATTTAGCTCGTTTTTTAATAAAACTTGAGGTACCAAGTGAGTTTCTTCAGGATGAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGTGGCTGACACCAATAAACAGTATGAAGAGTTAATGGAAGCCTTTAAAACTTTGCATAAAGAATATGAGCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTCAAGATATCTGGATTTTCTACAGCAGAAATAAGAAAGGATATCAGTGCAATGGAAGAAGAAAAGGATCAGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATTAAGAGAGTTGAACATTTGAAGAAAAGGGTTGAGACAGCTCAGAATCATCAATGGATGCTTAAAATAGCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCAACTTCGAGTTGAAAAAGAGAGAGAAGAATATCTTGCACAACAGAAACAGGAACAAAAGAATCAGCTATTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CATGCAGTGCAAAGATTGCAAAGAGTACAAAACCAGCTGAAAAGCATGCGCCAAGCTGCAGCAGATGCAAAGCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGAAAGTTTAATGAAGAGGCTAGAGGAGGAGATAAAATTTAATTTATATATGGTAACTGAAAAATTTCCTAAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATTAGAAAATAAGAAAAAGGAATTACATTTTTTACAAAAAGTAGTTTCAGAGCCAGCTATGGGCCATTCTGAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTTCTTGAACTTGAATCTAAAATAAATGAAATAAACACAGAAATTAACCAGTTGATTGAAAAGAAAATGATGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAATGAGCCCATTGAAGGCAAACTCTCACTGTATAGGCAACAGGCATCTATCATTTCCCGTAAAAAAGAAGCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGCTGAGGAACTTCAGGAGGCCAAGGAGAAGTTAGCCAGCCTAGAGAGAGAAGCATCAGTAAAGAGAAATCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACCCGTGAATTTGATGGTACTGAAGTTTTAAAGGGAGATGAGTTCAAACGATATGTCAATAAACTTCGAAGCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGTACAGTTTTCAAAAAGAAGCATCAGATAATAGCTGAACTTAAAGCTGAATTCGGTCTTTTGCAGAGGACTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAGAACTTCTTAAGCAACGTCATGAAAATATTCAACAACAACTGCAAACTATGGAGGAGAAAAAGGGTATATCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGATATAGTTACACCCAAGAAGAGCTAGAAAGAGTATCTGCACTGAAGAGTGAAGTTGATGAAATGAAAGGACG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AACATTGGATGATATGTCTGAAATGGTGAAAAAAACTGTATTCATTGGTATCTGAAAAGAAGTCAGCTCTTGCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCAGTTATAAAAGAGCTACGACAGTTGCGTCAAAAATATCAAGAACTGACCCAGGAGTGTGATGAAAAGAAATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCAGTATGATAGCTGTGCAGCAGGCCTCGAAAGCAATCGGTCCAAATTAGAACAGGAAGTTAGAAGACTCCGTG 1776
Query 1 --------------------------------------------ATGATTAAGAACCTAGAAGTTCAACTTCGT 30
||||||||||||||||||||||||||||||
Sbjct 1777 AAGAATGTCTTCAAGAAGAAAGTAGATACCATTATACAAATTGTATGATTAAGAACCTAGAAGTTCAACTTCGT 1850
Query 31 CGTGCTACTGATGAGATGAAGGCATATATCTCTTCTGATCAACAAGAAAAAAGAAAGGCAATTAGGGAACAGTA 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CGTGCTACTGATGAGATGAAGGCATATATCTCTTCTGATCAACAAGAAAAAAGAAAGGCAATTAGGGAACAGTA 1924
Query 105 TACCAAAAATACTGCTGAACAAGAAAACCTTGGAAAGAAACTTCGGGAAAAACAAAAAGTTATACGAGAAAGTC 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TACCAAAAATACTGCTGAACAAGAAAACCTTGGAAAGAAACTTCGGGAAAAACAAAAAGTTATACGAGAAAGTC 1998
Query 179 ATGGTCCAAATATGAAACAAGCAAAAATGTGGCGTGATTTGGAACAATTAATGGAATGTAAGAAACAGTGCTTT 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 ATGGTCCAAATATGAAACAAGCAAAAATGTGGCGTGATTTGGAACAATTAATGGAATGTAAGAAACAGTGCTTT 2072
Query 253 CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAGGACCGGCTAATACTG----- 321
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CTGAAACAACAAAGCCAAACTTCCATTGGTCAGGTAATTCAGGAGGGTGGGGAGGACCGGCTAATACTGTGAAT 2146
Query 322 -------------------------------------------------------------------------- 321
Sbjct 2147 TCTTGTGTCATCGTTTGGGGTTTTACTTGATACCACTAGCTATAAGCCTAATCTCATAATGTATTTCTTTTTTG 2220
Query 322 -------------------------------------------------------------------------- 321
Sbjct 2221 AAACTGATTTGTATAGCATTTTGTTTTCAGAAGAGCCATTCTTTATTAAGTTTTCATAGAAAATAATGTTAAGG 2294
Query 322 -------------------------------------------------------------------------- 321
Sbjct 2295 TAGATTTAGTTTGAATGTTTTTTCATATGAAAAAGAGGCTTTTATTCTTTTCCATAGTTTAGACATCACTGGCG 2368
Query 322 -------------------------------------------------------------------------- 321
Sbjct 2369 TCTTCTGAGTTTTATGAGACAGGAAACTAAGTTTACTATCTGTAAATGTAAACATATGTCCATTAAGAAACATG 2442
Query 322 -------------------------------------------------------------------------- 321
Sbjct 2443 TAGTTTTTTTTTAGAATGTAATAACCCAGTGGCTTACTGTTTTTCTTAATCTCTTTTAAAAAAACTTTAGAAGA 2516
Query 322 -------------------------------------------------------------------------- 321
Sbjct 2517 ATCTTTTAGGAACTAATATCTCTTGTTCTGAAGAAACATTTATCTGACGTTCAGCAGTTCCTACAGTTTTACTT 2590
Query 322 -------------------------------------------------------------------------- 321
Sbjct 2591 CAGTTTATTTTTCTTCTGTAAAATGCAAGAAAATTTAATATTTTGACTAACATGTCTTTTCTGTTTGTATCATT 2664
Query 322 ----------------------------------------------- 321
Sbjct 2665 TAAAGGCAAATAAACTTGGTACGTATTTCATATCTATTTAAAAAATG 2711
