Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15819
Subject:
XR_001782128.1
Aligned Length:
3130
Identities:
856
Gaps:
2239

Alignment

Query    1  -----------------ATGTCCAACCGAGTGGTCTGCCGAGAAGCCAGTCACGCCGGGAGCTGGTACACAGCC  57
                             |||||||||||||||||||||||.||||||||.||||||||||||||||||||.|||
Sbjct    1  GCGGCACAGGCACCAAGATGTCCAACCGAGTGGTCTGCCGGGAAGCCAGCCACGCCGGGAGCTGGTACACCGCC  74

Query   58  TCAGGACCGCAGCTGAATGCACAGCTAGAAGGTTGGCTTTCACAAGTACAGTCTACAAAAAGACCTGCTAGAGC  131
            ||||||||.||||||||.||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct   75  TCAGGACCTCAGCTGAACGCTCAGCTGGAAGGTTGGCTTTCACAAGTACAGTCTACGAAAAGACCTGCTAGAGC  148

Query  132  CATTATTGCCCCCCATGCAGGATATACGTACTGTGGGTCTTGTGCTGCCCATGCTTATAAACAAGTGGATCCGT  205
            |||||||||.||||||||.|||||.||.|||||||||||.|||||||||||||||||.||||||||||||||.|
Sbjct  149  CATTATTGCACCCCATGCGGGATACACATACTGTGGGTCCTGTGCTGCCCATGCTTACAAACAAGTGGATCCAT  222

Query  206  CTATTACCCGGAGAATTTTCATCCTTGGGCCTTCTCATCATGTGCCCCTCTCTCGATGTGCACTTTCCAGTGTG  279
            ||.|||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||.|||||||||
Sbjct  223  CTGTTACCCGGAGAATTTTCATCCTTGGGCCTTCCCATCATGTGCCCCTGTCTCGATGTGCACTCTCCAGTGTG  296

Query  280  GATATATATAGGACACCTCTGTATGACCTTCGTATTGACCAAAAGATTTACGGAGAACTGTGGAAGACAGGAAT  353
            ||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.||.||||||||||||||
Sbjct  297  GATATATATAGGACTCCTCTGTATGATCTTCGTATTGACCAAAAGATTTACGGAGAGCTATGGAAGACAGGAAT  370

Query  354  GTTTGAACGCATGTCTCTGCAGACAGATGAAGATGAACACAGTATTGAAATGCATTTGCCTTATACAGCTAAAG  427
            |||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GTTTGAACGAATGTCTCTGCAGACAGATGAAGATGAACACAGTATTGAAATGCATTTGCCTTATACAGCTAAAG  444

Query  428  CCATGGAAA-----------------------------------------------------------------  436
            |||||||||                                                                 
Sbjct  445  CCATGGAAAGATGCAGATTCTGCCCTCGAAGCCCCTGCATTGCAGAGGGACTGGAGATCTGTATGATCTTTATT  518

Query  437  --------------GCCATAAGGATGAGTTTACCATTATTCCTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAG  496
                          |||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCGCAGTTGACAAGGCCATAAAGATGAGTTTACCATTATTCCTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAG  592

Query  497  AACAGGAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCTAGTAATCTCTTTGTGGTTTCTTCTGATTTC  570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AACAGGAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCTAGTAATCTCTTTGTGGTTTCTTCTGATTTC  666

Query  571  TGCCATTGGGGTCAAAGGTTCCGTTACAGTTACTATGATGAATCCCAGGGGGAGATTTATAGATCCATTGAACA  644
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGCCACTGGGGTCAAAGGTTCCGTTACAGTTACTATGATGAATCCCAGGGGGAGATTTATAGATCCATTGAACA  740

Query  645  TCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGACCCTGTATCTTTTAGCAATTACTTGAAGAAATACC  718
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.|
Sbjct  741  TCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGATCCTGTATCTTTTAGCAATTATTTGAAGAAATATC  814

Query  719  ATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAATGCTATCACAGAGCTCCAGAAGAATGGAATG  792
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct  815  ATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAATGCTATCACAGAGCTTCAGAAGAATGGAATG  888

Query  793  AATATGAGTTTTTCGTTTTTGAATTATGCCCAGTCGAGCCAGTGTAGAAACTGGCAAGACAGTTCAGTGAGTTA  866
            ||||||||.|||||.||||||||||||||||||||||||||||||||||.||||||||||||||||||.|||||
Sbjct  889  AATATGAGCTTTTCCTTTTTGAATTATGCCCAGTCGAGCCAGTGTAGAAGCTGGCAAGACAGTTCAGTCAGTTA  962

Query  867  TGCAGCTGGAGCACTCACGGTCCAC-------------------------------------------------  891
            .||||||||||||||||||||||||                                                 
Sbjct  963  CGCAGCTGGAGCACTCACGGTCCACTGAAGCTCCGATCCTCAGGGACACCACCTGCACAGACTCGTACTCTGTC  1036

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1037  CAGGGTCCAGCCTAGCCTTTACCAAGATGTTGGTTCTGGTGTGGGGGGATTCTGAAACCTCAGACTAATAGAAC  1110

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1111  TCTCTTCTTCTTTTCTAGTAGGTGTAGTCCTCCTTAATTTCAACTCATTTTAAAAATGCTTTCTAGTTTGAGGC  1184

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1185  AGTGGAAGGAAGGCTGGAATCAAAATATTTGCCCAAATTGGCACACAGTGACTTGTAAAGCATTTAGCATATCT  1258

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1259  GAAATTTGCACTCTTTGCAGACTCATGCACATATATTCCGCTTTCAGAATAGTTTTGCAAATTGTACACAGACA  1332

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1333  AAGGGTGGAAGCTTTTTAATAAAAGAAACTGCATTTATAAATGATCTGTATTAGAATATAAGAAATCTCCAGTT  1406

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1407  ATAGACAATTACTACCCATGTTGTACAACAGATACCTTCTATTTTAGTTGCTAATAAAGGGCTACACAACTCAA  1480

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1481  AATAGTCTGATTTAAACTTATTGCTTTGTGGTATAAATGGAAATTGTTTTTTATTAATTCTATCTCAGAATTTT  1554

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1555  TGTTAAAATGGCAAGCCTCAGCTTCGATGTAATAATGTTAAAATTATTTTATTTTTACATTTATGTGATTTTTT  1628

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1629  TTTAAATCACAGAAATTATAGTCATATTTTAAAGTTAACTTTCAAAACTATAGTCATTGCATTTTTGTGTGTGA  1702

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1703  CATACCCTCATGTCATTATTATATTGTACTACAATATAAATTCAAGGATGCTTTAAAAACAAGTAGATTTATTC  1776

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1777  CTTTCCTCCAATGACTGTGTTCGGTAGTCTGCACATGAAGATATTGAAGAGTGTCATTAGTTGTGTTTCAAGTT  1850

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1851  GTTGCAGACCATCACCACTATGGTTTTTTGTTTGTTTGTTTGTTTTTATTGCTTTAAGCAATTTAACTCTTTCA  1924

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1925  CTTGAATTTTTAGCAAGAAATCATTAACAATATTAGTAACAAGGCCTATTGGACTTCTGATAGTCCTGCAAAAA  1998

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1999  ATTTGTTTGGGGAGGGCATGATTTTTGGTGCGGCTCTTCCAACTAAAATAATGGTATGGTGTTGTATTTCTTTA  2072

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2073  TCATAGATTTATTCTAGTCATTTTGGGGAGGAAAGTGTTAACTCATTAAGCCATCATGCATGTTGTTCATCATC  2146

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2147  CCTGTTTTACCAACACTGGATGTTTCTATAACATTGGAGAGTGTTAGTCTTCAGTGTTATACCCAAGTAGCACA  2220

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2221  AGCTTTAGATGCCTTGCACCAATTTTCTTTTGGAGATTTACGTTTCTTACTTATTAAATACCAATTTTCTATTC  2294

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2295  TCAAGAATGGGAGAAAATAATACTACCTTTTAGATTTAAAATTTACCTACTTATACATGTAGGAAATATACTCT  2368

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2369  TATACATCAGTGTTTTATTTTCCATTATTTAGATACGCTTTTGAGTACTATAAATATTTATTTCTTGTTTAATA  2442

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2443  CAGATTATAAAAATTTCTGAATTGACAATAGTGAATTTTTAAAATAATGTTTTCTGAGTATAGAATTTGAAAAT  2516

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2517  ACTGAAAAGTCAGAAGAAAAAATCTATTACCTACAATCTCACTACTCCAGAGATAACACTGTTAAATGTTTTTC  2590

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2591  TGTATTTACTTGTAGTCCTTGTGTTTTTTATGAGTGTGTATGTGTGTGTGTGTGTGTGTGCAACAACAGAATTG  2664

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2665  AGATTATAGTGCCCATACATTTGCGTTATGCCCTGTTATCCTAAGTATCTACTACCTGTGTCTCTGAAAGCACT  2738

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2739  ATTTTAAAAATGCCTGCCTAATATGCTATACTGTATGAAAATAGTTCTCTCTTTGGATGTTAGGCTGTTTCTAA  2812

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2813  TTTTCCTCAATTTTATAATGGTACGGACATTCTGTGTAAATTAGACCCAGTCTCTAGGATATAATCATGAAAAT  2886

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2887  GAAATAAATGGTTTACATGATAATTTTGTAGGCCCTTTAAAAGTATGCCAAATTATATTTTCAATAGATTGTAT  2960

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2961  CAAATTAACAGCACCCCCACATCAGCATCGTTTCTTTTAATTTTTGAAAAATTGTTAAGCAAGTAATTGTTTCT  3034

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 3035  TTTTTAAAGACTTTCTTTCGAATTAGTCATTTATTGTCTTTTATAAATTTAGAATGTTTTTTTTGAAAAACAAC  3108

Query  892  ----------------------  891
                                  
Sbjct 3109  ATTAAAGAGACGTCTAGTTCTA  3130

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