Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15858
- Subject:
- XR_926258.3
- Aligned Length:
- 4773
- Identities:
- 207
- Gaps:
- 4566
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCTTTTAAGAGCTCGTTGATTCCTCTGCAAGGTGGTGCAGCATCCTCTGTCCCTTCATTCATTTCAGATCTAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAGGTCTCCCTGTAAACAGATCTCTCGGATCAATAAGCATGAATGACGAAGACTACAGCACCATCTATGACAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATCCAAAATGAGAGGACGTATGAGGTTCCAGACCAGCCAGAAGAAAATGAAAGTCCCCATTATGATGATGTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGAGTACTTAAGGCCAGAAAATGATTTATATGCCACTCAGCTGAATACCCATGAGTATGATTTTGTGTCAGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATACCATTAAGGGTGAAGAGACCAGCTTGGCCTCTGTCCAGTCAGAAGACAGAGGCTACCTCCTGCCTGATGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GATATACTCTGAACTCCAGGAGGCTCATCCAGGTGAGCCCCAGGAGGACAGGGGCATCTCAATGGAAGGGTTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTCATCAACCCAGGACCAGCAACTCTGCGCAGCAGAACTCCAGGAGAATGGGAGTGTGATGAAGGAAGATCTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTTCTCCTTCAAGCTTCACCATTCAGCACAGTAAGGCCTTCTCTACCACCAAGTATTCCTGCTATTCTGATGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGAAGGTTTGGAAGAAAAGGAGGGAGCTCACATGAACCCTGAGATTTACCTCTTTGTGAAGGCTGGAATCGATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGAAAGCATCGGCAACTGTCCTTTCTCTCAGCGCCTCTTCATGATCCTCTGGCTGAAAGGAGTCGTGTTCAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTCACCACTGTGGATCTGAAAAGAAAGCCAGCTGACCTGCACAACCTAGCCCCCGGCACGCACCCGCCCTTCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GACCTTCAACGGGGACGTGAAGACAGACGTCAATAAGATCGAGGAGTTCCTGGAGGAGACCTTGACCCCTGAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGTACCCCAAACTGGCTGCAAAACACCGGGAATCCAACACAGCGGGCATCGACATCTTTTCCAAGTTTTCTGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TACATCAAAAATACCAAGCAGCAGAACAATGCTGCTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAATTGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGACTACCTGAACACCCCTCTACCAGAGGAGATTGACGCCAACACTTGTGGGGAAGACAAGGGGTCCCGGCGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTTCCTGGATGGGGATGAGCTGACCCTGGCTGACTGCAATCTGTTGCCCAAGCTCCATGTGGTCAAGATTGTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCAAGAAATACCGCAACTATGATATCCCGGCTGAGATGACAGGCCTGTGGCGGTACCTCAAGAACGCCTATGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCGTGATGAGTTCACCAACACCTGTGCAGCTGACAGTGAGATCGAGTTGGCCTACGCTGATGTCGCCAAACGCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCAGCCGATCCTGAGCACAGCCATTTTGCCCCATCCCCGCTGCAGAAGGACTCAACCACTCCCCTAAGACTCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCTTCATAGACTCCTCTGTATCACTGCCTTGAGGCGCACTTTTTATAATCAAGCCTCATCTTGCTGGTATCATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGAACTCCAGCCTGCTATCTTTCATGAAGTTTCATCTCCTAAAAAGCTTACCCAGCCTGAGCTTGGGGACCTGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCAGAGGAAACTAAGAAAAATGCACTCATCAACTCCTTCTCCCAGTGAACGCCCGGTGAGAAAATCCATTTGCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTGCTGGAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCCCCTGGACTTGGCTCATTTCTCAGCAAGGGCAGGATAGCACGGGTCCTTTCCATAGAAATATCAACAAATTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TAACCCAAGCAATCCCTGGACCTACCTGCCTCCAGGGATCTCTGAAGAAAAAAAGTAACCCATTGATCAAATCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAGGAGAGGAAGCAGGAGGTCTCCTAGAGCCCATTGAGGAAGAGGAACTTTCTCAGTAGGACACTTTATAAGCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGAGAAAGCTTTGAAAAGGCGGAATGAGTTGATTCATTTCCACCTCAAAAGGAACCTTTCCAGGTCCCCCTGGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AATTGTGCCCTGGAGATGTTTAACAAGGAGAACTGGTGAGGAAAGAGTCCTTTTTTACTGTAGGGAAAAGCCCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAACTGGCCTCCTGGGGGATGAGGGCTGAAATGATCCCGAAGGCCTTTTAATTAGTGTGAAATCCTGCTGTACT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGAAATCCTTCCCCGAATTTACAGCACAGGCAGGATGACCTAAGAGGCAGTTTACTTCCCTGAGACCCACAGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGGCTGTTCTGGAAACACATCTGTGAATCATAGCCAATTGCCACAGAGAAAACAGAACCAAGCCTCCGGTGAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCCACTCCACCCCAGAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGATGTTCAGAATTCAGCAACTGGAAAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCTTAAAAACAAACAGGCCAAACCAAATCAATATTGCTGTTTCTAGATGTCCCTTCTGTGGTTGAGCTAGTTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TACAGAGATAAATATATTAAGACAAGGAGGTGGGGGTGTTATATGATCAATGATAGCCATTTGAAAGAGAGGGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGAGTACAGAAGGAAGGCACTTCTGGGTACTTAATTCAGAAATTTCTTTATATTTCAGCACTGGATTATCATAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AATGCAAGTGACTATGGACTAAGAGTTAGTTATGGTGTCTTATGACTAGATTTATTATGGTATATTAAAGTAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AATAATATTAATATTACCTTCCTTTTTTTTTTTGTTTCAAAAGAGATCTTTCTCCAGATGCTTCAGCCTGTCTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GCCTTCTTATCATATGTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAGAACAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTCAGGGAGCACGGGAGGGTCTGCAGTTGGGACCCCACAACTATACAGCTATAGGGTAGGAGGCTTCCTTTTCA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTGGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGGATGTATTTGTGTTGAGAT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTTATTTTATTTTGTATTTATTTATCTTCTTTGACTTGCACAGCACTATTGGGGGTGGGGGAAGCAGGGTAGTG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAATTCACTGTCTAGTCAGCAATGCCTGC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTCTGAGTTTGGCCCAGAGAGAAGGTATTGAGTAAGATTTTAATAACTGTAAAAAGTAAGCTGGATAAGTAAAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TCATGATGGATCCAAAGCACAGTTTCTTCATCTCCTGATAAAGAAAGTCAAATGCTTGATAAATTCAGAGTCAC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AGATGTGAGCATAGCTATATTCTTTTAAACGAGAGGTAGAGTGACCTAGCACTAAGCAAATGAGCTGAAATGTC 3330
Query 1 ------------------------------------------------------------ATGGCCCTGTCCTC 14
||||||||||||||
Sbjct 3331 GGAAACAGAGTCCATCAGCTTATTTGGCCACACGATCCCAAACTAGTTTTATCTTGGGAAATGGCCCTGTCCTC 3404
Query 15 AGCATTCCCTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCTTATCAGAAAAAGGCCACACCAAGTGCGAGT 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 AGCATTCCCTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCTTATCAGAAAAAGGCCACACCAAGTGCGAGT 3478
Query 89 TTTCCCAGGCTGACTTTCCAGGCCCTTATCAAATGAAACAACAGAAGCTCTTCACAGTTCTGTGCCCCATGGCC 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 TTTCCCAGGCTGACTTTCCAGGCCCTTATCAAATGAAACAACAGAAGCTCTTCACAGTTCTGTGCCCCATGGCC 3552
Query 163 ACTCCACAGACAGACAATACCAAGCATCTTAGAACTGTCATAAGA----------------------------- 207
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 ACTCCACAGACAGACAATACCAAGCATCTTAGAACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCA 3626
Query 208 -------------------------------------------------------------------------- 207
Sbjct 3627 TATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAAATAGAACTAAGAGAGAGGCAGAGGCAGGAAGCTGCGGGT 3700
Query 208 -------------------------------------------------------------------------- 207
Sbjct 3701 CTATCTTGTAAAGAGTTTAGCATCACTGTGAGAGTGTGTGTCTAAAATTAAATTAAACTAGAAGCAGCAGGTGA 3774
Query 208 -------------------------------------------------------------------------- 207
Sbjct 3775 GTATTTGGTAAGTACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACGGTGAATCA 3848
Query 208 -------------------------------------------------------------------------- 207
Sbjct 3849 AGATGCTGGTGTCATCCTCCTTGGAAAAAGGAAATGTTAACTCATGGTTAAAACTAAGTACAATGATTCCCAAG 3922
Query 208 -------------------------------------------------------------------------- 207
Sbjct 3923 GGATCACTTTCTTATTTTTTTAAATGACATTAAGGAGAATCTTAAGAAAGCATCAGAGAAAGACATGTGCATGT 3996
Query 208 -------------------------------------------------------------------------- 207
Sbjct 3997 GAAGCACCCTGATTCTGATGTTAGGAAAACTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTAT 4070
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4071 CCATTTCTCTTTATCATTCAAATCAAGCAACATGTGCCCTCCTCATCAACACACATTCTTCCCCTTTGTCAGTA 4144
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4145 TGCATCTCCCAGCTTAGTGTCAGGATACTTTCGATTCATAATTATGTATGATCCAAAGTGTGCATAATTTCATT 4218
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4219 TAACGTTAAAGAAATAGATCCAATTCCTTTCTTGCAACCAAAAATAAATAAAATACGTTGCCTCAATATAAGGT 4292
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4293 TTGGGCTATTCTGTGTTTCTATAGAAGCAATCTGTTTTTGGTAAAATGTACTTTTAAGGATCCAGTCATCTGAA 4366
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4367 GTATTTTATGTAGAGTTAGAGATTTCACAATATTGACTATACATATATTTAAAATATAAATTATCCAGCTGATG 4440
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4441 TTTGAATTTGTCTTACTTTCCTGGCCACCTCGTTGTCCTATTTTATAAGCTGGGGAGTTAACTAGCTTAACAAA 4514
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4515 AGATGCTTAGCTTTTGTAAAAGAACAAGTGTTTCATTTTACAAAGACACTCCAAATGATAGTTACTTGATTTTC 4588
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4589 TCGAGACCTTTAACTATGGTGATGAATAACAGGACTTGCTTTCAAGCCTTAATAAATGTAAAATGCCTTTTAAT 4662
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4663 GAAGATACAGCTGAGTGTTTTCCTCATGAATCTGAACCAATTACCAATTTGTGTTCCAGTCTTGATTGGTATTG 4736
Query 208 ------------------------------------- 207
Sbjct 4737 ACTGATTCAAATAAAGTTGGTTTATTTTCAAATATTA 4773
