Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15870
- Subject:
- NM_001270890.2
- Aligned Length:
- 2760
- Identities:
- 1060
- Gaps:
- 1698
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCTCGGCCTCGGTCACCGCTTTCGAGAAGGAGCATCTCTGGATGTATCTGCAGGCGCTCGGCTTCGAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCCCGGCAACCATTGCCTGCGGAAAGATCGTGTCGCACACGCACCTCGGAGTGAACATGTTTGACAAGCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCGTGATGCCTTTCATATAATTTCTTATTTTTTGTTTCAAGTTCTGGACCAGTCTCTCACCAAAGAAGTTTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAATTTTGTTGGCCCCCATTTGACCAAAAAAGTGACACTGAATTCCGAAAACATTGCTGTGAATGGATAAAAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATTTCTGGTGAATGTGGAAGTAGCTTTCCTCAAGTTGTTGGTTCACTATTTCTTTCTCCTGGTGGTCCTAAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTATTCATCTGATGTATCATTTTGCAAGATTTGTTGCAATGAAATATATTAAATCCAATTCTAAAAATTCTTCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATCATTTTGTAGAGACATTTAACATAAAACCACAGGACTTGCACAAATGCATTGCCAGATGCCATTTCGCACG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAGCAGATTTTTACAAATTTTGCAAAGACAAGATTGTGTTACCCAAAAATATCAGGAAAATGCACAATTATCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTAAGCAGGTACGAAACTTGAGATCTGAATGTATAGGATTGGAAAACCAAATAAAGAAAATGGAACCCTATGAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACCACAGTAATATGGAAGAAAAAATTCAAAAGGTTCGGTCTTTGTGGGCTTCAGTGAATGAAACGCTCATGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTGGAAAAAGAGAGAGAAGTTGTTAGTTCGGTCCTTAGTCTTGTTAACCAATATGCTTTAGATGGAACTAATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGCTATTAATATTCCAAGGCTCTTACTTGACAAAATTGAGAAACAAATGTTTCAGTTGCACATAGGAAATGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TATGAGGCTGGAAAACTGAACCTCTTAACAGTTATTCAGTTATTAAATGAAGTCTTGAAGGTGATGAAATATGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACGTTGTCAGGCTGATCAAGCAAGATTGACGGTAGACCTTCACTACCTTGAAAAAGAGACCAAATTTCAGAAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAAGATTATCAGATCTGAAACATATGAGTCTAATTAAAGGTTGGACTCCATCTGTAGATCTTTTACCACCAATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCTCCCCTTTCGTTTGATCCTGCCTCAGAAGAAGTGTATGCAAAGAGTATTCTTTGTCAGTATCCTGCTTCACT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCAGATGCACATAAGCAACATAACCAAGAAAATGGTTGCAGAGGAGACAGTGATACCTTGGGAGCGCTACATG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATCTAGCCAACAGCCCTGCCTCTTTCTTGTCGCAGTCAGTTTCATCATCAGATAGAAACAGTGTTACAGTACTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAAAGGACACAAAGATGGGAACTCCCAAAGAAAAAAATGAAGCAATTTCTAAGAAAATACCAGAATTTGAAGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGAAAATTCTCCATTATCAGATGTTGCAAAGAATACAGAGAGTAGTGCATTTGGAGGGTCTTTGCCAGCTAAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAAGTGATCCATTTCAAAAAGAGCAAGATCATCTGGTAGAAGAGGTTGCCAGAGCAGTTTTATCTGATTCACCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGCTCTCTGAAGGAAAAGAAATAAAATTAGAGGAACTAATTGACTCTCTGGGTTCTAACCCCTTCTTAACAAG 1628
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 1629 GAATCAGATTCCCCGTACTCCAGAAAACTTGATAACTGAAATTAGGAGCTCATGGAGAAAAGCTATTGAAATGG 1702
Query 5 AAGAAAACAGAACTAAAGAACCAATTCAAATGGATGTTGAACATAGAGAAGTATTGCCAGAATCATTACCTGTG 78
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1703 AAGAAAACAGAACTAAAGAACCAATTCAAATGGATGCTGAACATAGAGAAGTATTGCCAGAATCATTACCTGTG 1776
Query 79 TTGCACAATCAAAGAGAATTTAGCATGGCTGATTTTCTCTTAGAAACCACTGTATCAGATTTTGGCCAGTCTCA 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TTGCACAATCAAAGAGAATTTAGCATGGCTGATTTTCTCTTAGAAACCACTGTATCAGATTTTGGCCAGTCTCA 1850
Query 153 TTTGACTGAAGAGAAAGTTATTTCAGATTGCGAGTGTGTGCCTCAGAAACATGTGCTGACCAGTCACATAGATG 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TTTGACTGAAGAGAAAGTTATTTCAGATTGCGAGTGTGTGCCTCAGAAACATGTGCTGACCAGTCACATAGATG 1924
Query 227 AACCACCAACACAAAATCAGTCAGATTTGTTAAATAAGAAAGTAATTTGCAAGCAAGATTTGGAATGTTTAGCC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AACCACCAACACAAAATCAGTCAGATTTGTTAAATAAGAAAGTAATTTGCAAGCAAGATTTGGAATGTTTAGCC 1998
Query 301 TTCACCAAGCTTTCAGAAACTAGCCGAATGGAGACATTCTCCCCTGCTGTCGGCAATAGGATAGATGTGATGGG 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TTCACCAAGCTTTCAGAAACTAGCCGAATGGAGACATTCTCCCCTGCTGTCGGCAATAGGATAGATGTGATGGG 2072
Query 375 TGGCAGTGAAGAGGAGTTTATGAAAATATTGGACCACTTAGAAGTTTCTTGTAACAAACCTTCCACAAATAAAA 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGGCAGTGAAGAGGAGTTTATGAAAATATTGGACCACTTAGAAGTTTCTTGTAACAAACCTTCCACAAATAAAA 2146
Query 449 CTATGTTGTGGAATTCTTTTCAGATATCAATTGGAATTAGTTCTAAGAGTTTTAAAGATAATGATTTTGGCATA 522
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CTATGTTGTGGAATTCTTTTCAGATATCAAGTGGAATTAGTTCTAAGAGTTTTAAAGATAATGATTTTGGCATA 2220
Query 523 TTACACGAAACTCTCCCGGAAGAAGTTGGTCATCTAAGTTTTAATAGTTCCAGTAGTTCAGAGGCCAATTTTAA 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TTACACGAAACTCTCCCGGAAGAAGTTGGTCATCTAAGTTTTAATAGTTCCAGTAGTTCAGAGGCCAATTTTAA 2294
Query 597 ACTGGAGCCAAATAGTCCTATGCATGGTGGCACTCTTCTAGAAGATGTTGTGGGAGGGAGACAGACTACTCCAG 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 ACTGGAGCCAAATAGTCCTATGCATGGTGGCACTCTTCTAGAAGATGTTGTGGGAGGGAGACAGACTACTCCAG 2368
Query 671 AATCAGACTTTAATTTACAGGCTCTTCGCAGTAGATACGAGGCTCTGAAGAAATCTCTTTCCAAGAAAAGGGAA 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 AATCAGACTTTAATTTACAGGCTCTTCGCAGTAGATACGAGGCTCTGAAGAAATCTCTTTCCAAGAAAAGGGAA 2442
Query 745 GAATCTTACCTCTCGAATTCCCAAACACCCGAAAGACACAAACCAGAATTGAGCCCTACTCCCCAAAATGTACA 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GAATCTTACCTCTCGAATTCCCAAACACCCGAAAGACACAAACCAGAATTGAGCCCTACTCCCCAAAATGTACA 2516
Query 819 AACAGATGATACGCTTAACTTTTTGGACACCTGTGATTTGCATACTGAGCATATAAAGCCATCTTTACGCACGT 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 AACAGATGATACGCTTAACTTTTTGGACACCTGTGATTTGCATACTGAGCATATAAAGCCATCTTTACGCACGT 2590
Query 893 CCATCGGTGAAAGAAAACGGTCTCTTTCACCACTAATTAAGTTTTCTCCAGTGGAACAAAGATTGAGAACCACA 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CCATCGGTGAAAGAAAACGGTCTCTTTCACCACTAATTAAGTTTTCTCCAGTGGAACAAAGATTGAGAACCACA 2664
Query 967 ATAGCATGTAGTCTTGGAGAACTACCTAATTTAAAGGAAGAAGACATTTTGAATAAGAGCCTTGATGCAAAAGA 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 ATAGCATGTAGTCTTGGAGAACTACCTAATTTAAAGGAAGAAGACATTTTGAATAAGAGCCTTGATGCAAAAGA 2738
Query 1041 ACCACCGTCTGACTTGACAAGA 1062
||||||||||||||||||||||
Sbjct 2739 ACCACCGTCTGACTTGACAAGA 2760
