Construct: ORF ccsbBroad304_15870

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015164.1_s304c1, BRDN0000410063
Derived from:
ccsbBroadEn_15870
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
HAUS6 (54801)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15870
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54801 HAUS6 HAUS augmin like complex su... XM_011517935.2 67.4% 67.1% 1_510del;551C>T;989G>T
2 human 54801 HAUS6 HAUS augmin like complex su... NM_001270890.2 38.4% 38.2% 1_1698del;1739C>T;2177G>T
3 human 54801 HAUS6 HAUS augmin like complex su... NM_017645.5 36.9% 36.8% 1_1803del;1844C>T;2282G>T
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1128
ORF length:
1062
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga agaaaacaga actaaagaac caattcaaat ggatgttgaa catagagaag
121tattgccaga atcattacct gtgttgcaca atcaaagaga atttagcatg gctgattttc
181tcttagaaac cactgtatca gattttggcc agtctcattt gactgaagag aaagttattt
241cagattgcga gtgtgtgcct cagaaacatg tgctgaccag tcacatagat gaaccaccaa
301cacaaaatca gtcagatttg ttaaataaga aagtaatttg caagcaagat ttggaatgtt
361tagccttcac caagctttca gaaactagcc gaatggagac attctcccct gctgtcggca
421ataggataga tgtgatgggt ggcagtgaag aggagtttat gaaaatattg gaccacttag
481aagtttcttg taacaaacct tccacaaata aaactatgtt gtggaattct tttcagatat
541caattggaat tagttctaag agttttaaag ataatgattt tggcatatta cacgaaactc
601tcccggaaga agttggtcat ctaagtttta atagttccag tagttcagag gccaatttta
661aactggagcc aaatagtcct atgcatggtg gcactcttct agaagatgtt gtgggaggga
721gacagactac tccagaatca gactttaatt tacaggctct tcgcagtaga tacgaggctc
781tgaagaaatc tctttccaag aaaagggaag aatcttacct ctcgaattcc caaacacccg
841aaagacacaa accagaattg agccctactc cccaaaatgt acaaacagat gatacgctta
901actttttgga cacctgtgat ttgcatactg agcatataaa gccatcttta cgcacgtcca
961tcggtgaaag aaaacggtct ctttcaccac taattaagtt ttctccagtg gaacaaagat
1021tgagaaccac aatagcatgt agtcttggag aactacctaa tttaaaggaa gaagacattt
1081tgaataagag ccttgatgca aaagaaccac cgtctgactt gacaagatnn ccaactttct
1141tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
1201aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)