Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15870
- Subject:
- NM_017645.5
- Aligned Length:
- 2865
- Identities:
- 1060
- Gaps:
- 1803
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCTCGGCCTCGGTCACCGCTTTCGAGAAGGAGCATCTCTGGATGTATCTGCAGGCGCTCGGCTTCGAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCCCGGCAACCATTGCCTGCGGAAAGATCGTGTCGCACACGCACCTCGGAGTGAACATGTTTGACAAGCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCGTGATGCCTTTCATATAATTTCTTATTTTTTGTTTCAAGTTCTGGACCAGTCTCTCACCAAAGAAGTTTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAATTTTGTTGGCCCCCATTTGACCAAAAAAGTGACACTGAATTCCGAAAACATTGCTGTGAATGGATAAAAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATTTCTGGTGAATGTGGAAGTAGCTTTCCTCAAGTTGTTGGTTCACTATTTCTTTCTCCTGGTGGTCCTAAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTATTCATCTGATGTATCATTTTGCAAGATTTGTTGCAATGAAATATATTAAATCCAATTCTAAAAATTCTTCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATCATTTTGTAGAGACATTTAACATAAAACCACAGGACTTGCACAAATGCATTGCCAGATGCCATTTCGCACG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAGCAGATTTTTACAAATTTTGCAAAGACAAGATTGTGTTACCCAAAAATATCAGGAAAATGCACAATTATCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTAAGCAGGTACGAAACTTGAGATCTGAATGTATAGGATTGGAAAACCAAATAAAGAAAATGGAACCCTATGAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACCACAGTAATATGGAAGAAAAAATTCAAAAGGTTCGGTCTTTGTGGGCTTCAGTGAATGAAACGCTCATGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTGGAAAAAGAGAGAGAAGTTGTTAGTTCGGTCCTTAGTCTTGTTAACCAATATGCTTTAGATGGAACTAATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGCTATTAATATTCCAAGGCTCTTACTTGACAAAATTGAGAAACAAATGTTTCAGTTGCACATAGGAAATGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TATGAGGCTGGAAAACTGAACCTCTTAACAGTTATTCAGTTATTAAATGAAGTCTTGAAGGTGATGAAATATGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACGTTGTCAGGCTGATCAAGCAAGATTGACGGTAGACCTTCACTACCTTGAAAAAGAGACCAAATTTCAGAAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAAGATTATCAGATCTGAAACATATGAGGTATAGAATAAAAGATGATCTCACAACTATAAGACATTCTGTTGTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAAAAGCAAGGAGAATGGCATAAAAAGTGGAAAGAATTTCTTGGTTTGTCTCCTTTCAGTCTAATTAAAGGTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GACTCCATCTGTAGATCTTTTACCACCAATGTCTCCCCTTTCGTTTGATCCTGCCTCAGAAGAAGTGTATGCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGAGTATTCTTTGTCAGTATCCTGCTTCACTTCCAGATGCACATAAGCAACATAACCAAGAAAATGGTTGCAGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGAGACAGTGATACCTTGGGAGCGCTACATGATCTAGCCAACAGCCCTGCCTCTTTCTTGTCGCAGTCAGTTTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATCATCAGATAGAAACAGTGTTACAGTACTTGAAAAGGACACAAAGATGGGAACTCCCAAAGAAAAAAATGAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAATTTCTAAGAAAATACCAGAATTTGAAGTGGAAAATTCTCCATTATCAGATGTTGCAAAGAATACAGAGAGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTGCATTTGGAGGGTCTTTGCCAGCTAAAAAAAGTGATCCATTTCAAAAAGAGCAAGATCATCTGGTAGAAGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGTTGCCAGAGCAGTTTTATCTGATTCACCACAGCTCTCTGAAGGAAAAGAAATAAAATTAGAGGAACTAATTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACTCTCTGGGTTCTAACCCCTTCTTAACAAGGAATCAGATTCCCCGTACTCCAGAAAACTTGATAACTGAAATT 1776
Query 1 ---------------------------ATGGAAGAAAACAGAACTAAAGAACCAATTCAAATGGATGTTGAACA 47
||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1777 AGGAGCTCATGGAGAAAAGCTATTGAAATGGAAGAAAACAGAACTAAAGAACCAATTCAAATGGATGCTGAACA 1850
Query 48 TAGAGAAGTATTGCCAGAATCATTACCTGTGTTGCACAATCAAAGAGAATTTAGCATGGCTGATTTTCTCTTAG 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TAGAGAAGTATTGCCAGAATCATTACCTGTGTTGCACAATCAAAGAGAATTTAGCATGGCTGATTTTCTCTTAG 1924
Query 122 AAACCACTGTATCAGATTTTGGCCAGTCTCATTTGACTGAAGAGAAAGTTATTTCAGATTGCGAGTGTGTGCCT 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AAACCACTGTATCAGATTTTGGCCAGTCTCATTTGACTGAAGAGAAAGTTATTTCAGATTGCGAGTGTGTGCCT 1998
Query 196 CAGAAACATGTGCTGACCAGTCACATAGATGAACCACCAACACAAAATCAGTCAGATTTGTTAAATAAGAAAGT 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CAGAAACATGTGCTGACCAGTCACATAGATGAACCACCAACACAAAATCAGTCAGATTTGTTAAATAAGAAAGT 2072
Query 270 AATTTGCAAGCAAGATTTGGAATGTTTAGCCTTCACCAAGCTTTCAGAAACTAGCCGAATGGAGACATTCTCCC 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AATTTGCAAGCAAGATTTGGAATGTTTAGCCTTCACCAAGCTTTCAGAAACTAGCCGAATGGAGACATTCTCCC 2146
Query 344 CTGCTGTCGGCAATAGGATAGATGTGATGGGTGGCAGTGAAGAGGAGTTTATGAAAATATTGGACCACTTAGAA 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CTGCTGTCGGCAATAGGATAGATGTGATGGGTGGCAGTGAAGAGGAGTTTATGAAAATATTGGACCACTTAGAA 2220
Query 418 GTTTCTTGTAACAAACCTTCCACAAATAAAACTATGTTGTGGAATTCTTTTCAGATATCAATTGGAATTAGTTC 491
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 2221 GTTTCTTGTAACAAACCTTCCACAAATAAAACTATGTTGTGGAATTCTTTTCAGATATCAAGTGGAATTAGTTC 2294
Query 492 TAAGAGTTTTAAAGATAATGATTTTGGCATATTACACGAAACTCTCCCGGAAGAAGTTGGTCATCTAAGTTTTA 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TAAGAGTTTTAAAGATAATGATTTTGGCATATTACACGAAACTCTCCCGGAAGAAGTTGGTCATCTAAGTTTTA 2368
Query 566 ATAGTTCCAGTAGTTCAGAGGCCAATTTTAAACTGGAGCCAAATAGTCCTATGCATGGTGGCACTCTTCTAGAA 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ATAGTTCCAGTAGTTCAGAGGCCAATTTTAAACTGGAGCCAAATAGTCCTATGCATGGTGGCACTCTTCTAGAA 2442
Query 640 GATGTTGTGGGAGGGAGACAGACTACTCCAGAATCAGACTTTAATTTACAGGCTCTTCGCAGTAGATACGAGGC 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GATGTTGTGGGAGGGAGACAGACTACTCCAGAATCAGACTTTAATTTACAGGCTCTTCGCAGTAGATACGAGGC 2516
Query 714 TCTGAAGAAATCTCTTTCCAAGAAAAGGGAAGAATCTTACCTCTCGAATTCCCAAACACCCGAAAGACACAAAC 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TCTGAAGAAATCTCTTTCCAAGAAAAGGGAAGAATCTTACCTCTCGAATTCCCAAACACCCGAAAGACACAAAC 2590
Query 788 CAGAATTGAGCCCTACTCCCCAAAATGTACAAACAGATGATACGCTTAACTTTTTGGACACCTGTGATTTGCAT 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CAGAATTGAGCCCTACTCCCCAAAATGTACAAACAGATGATACGCTTAACTTTTTGGACACCTGTGATTTGCAT 2664
Query 862 ACTGAGCATATAAAGCCATCTTTACGCACGTCCATCGGTGAAAGAAAACGGTCTCTTTCACCACTAATTAAGTT 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 ACTGAGCATATAAAGCCATCTTTACGCACGTCCATCGGTGAAAGAAAACGGTCTCTTTCACCACTAATTAAGTT 2738
Query 936 TTCTCCAGTGGAACAAAGATTGAGAACCACAATAGCATGTAGTCTTGGAGAACTACCTAATTTAAAGGAAGAAG 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 TTCTCCAGTGGAACAAAGATTGAGAACCACAATAGCATGTAGTCTTGGAGAACTACCTAATTTAAAGGAAGAAG 2812
Query 1010 ACATTTTGAATAAGAGCCTTGATGCAAAAGAACCACCGTCTGACTTGACAAGA 1062
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 ACATTTTGAATAAGAGCCTTGATGCAAAAGAACCACCGTCTGACTTGACAAGA 2865
