Nucleotide Global Alignment

Description

• Query: ccsbBroad304_15870
• Subject: XM_011517935.2
• Aligned Length: 1572
• Identities: 1060
• Gaps: 510

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAAACACTTGTCACCTATAGAACCCCATTCTCAAGTGGCATTTACTCATCGATTCCATCAATCCATCAAAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGTTAACATCCCTGCCTCTTTCTTGTCGCAGTCAGTTTCATCATCAGATAGAAACAGTGTTACAGTACTTGAAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGACACAAAGATGGGAACTCCCAAAGAAAAAAATGAAGCAATTTCTAAGAAAATACCAGAATTTGAAGTGGAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AATTCTCCATTATCAGATGTTGCAAAGAATACAGAGAGTAGTGCATTTGGAGGGTCTTTGCCAGCTAAAAAAAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGATCCATTTCAAAAAGAGCAAGATCATCTGGTAGAAGAGGTTGCCAGAGCAGTTTTATCTGATTCACCACAGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCTCTGAAGGAAAAGAAATAAAATTAGAGGAACTAATTGACTCTCTGGGTTCTAACCCCTTCTTAACAAGGAAT  444

Query    1  ------------------------------------------------------------------ATGGAAGA  8
                                                                              ||||||||
Sbjct  445  CAGATTCCCCGTACTCCAGAAAACTTGATAACTGAAATTAGGAGCTCATGGAGAAAAGCTATTGAAATGGAAGA  518

Query    9  AAACAGAACTAAAGAACCAATTCAAATGGATGTTGAACATAGAGAAGTATTGCCAGAATCATTACCTGTGTTGC  82
            ||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAACAGAACTAAAGAACCAATTCAAATGGATGCTGAACATAGAGAAGTATTGCCAGAATCATTACCTGTGTTGC  592

Query   83  ACAATCAAAGAGAATTTAGCATGGCTGATTTTCTCTTAGAAACCACTGTATCAGATTTTGGCCAGTCTCATTTG  156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACAATCAAAGAGAATTTAGCATGGCTGATTTTCTCTTAGAAACCACTGTATCAGATTTTGGCCAGTCTCATTTG  666

Query  157  ACTGAAGAGAAAGTTATTTCAGATTGCGAGTGTGTGCCTCAGAAACATGTGCTGACCAGTCACATAGATGAACC  230
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACTGAAGAGAAAGTTATTTCAGATTGCGAGTGTGTGCCTCAGAAACATGTGCTGACCAGTCACATAGATGAACC  740

Query  231  ACCAACACAAAATCAGTCAGATTTGTTAAATAAGAAAGTAATTTGCAAGCAAGATTTGGAATGTTTAGCCTTCA  304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACCAACACAAAATCAGTCAGATTTGTTAAATAAGAAAGTAATTTGCAAGCAAGATTTGGAATGTTTAGCCTTCA  814

Query  305  CCAAGCTTTCAGAAACTAGCCGAATGGAGACATTCTCCCCTGCTGTCGGCAATAGGATAGATGTGATGGGTGGC  378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCAAGCTTTCAGAAACTAGCCGAATGGAGACATTCTCCCCTGCTGTCGGCAATAGGATAGATGTGATGGGTGGC  888

Query  379  AGTGAAGAGGAGTTTATGAAAATATTGGACCACTTAGAAGTTTCTTGTAACAAACCTTCCACAAATAAAACTAT  452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGTGAAGAGGAGTTTATGAAAATATTGGACCACTTAGAAGTTTCTTGTAACAAACCTTCCACAAATAAAACTAT  962

Query  453  GTTGTGGAATTCTTTTCAGATATCAATTGGAATTAGTTCTAAGAGTTTTAAAGATAATGATTTTGGCATATTAC  526
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GTTGTGGAATTCTTTTCAGATATCAAGTGGAATTAGTTCTAAGAGTTTTAAAGATAATGATTTTGGCATATTAC  1036

Query  527  ACGAAACTCTCCCGGAAGAAGTTGGTCATCTAAGTTTTAATAGTTCCAGTAGTTCAGAGGCCAATTTTAAACTG  600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ACGAAACTCTCCCGGAAGAAGTTGGTCATCTAAGTTTTAATAGTTCCAGTAGTTCAGAGGCCAATTTTAAACTG  1110

Query  601  GAGCCAAATAGTCCTATGCATGGTGGCACTCTTCTAGAAGATGTTGTGGGAGGGAGACAGACTACTCCAGAATC  674
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GAGCCAAATAGTCCTATGCATGGTGGCACTCTTCTAGAAGATGTTGTGGGAGGGAGACAGACTACTCCAGAATC  1184

Query  675  AGACTTTAATTTACAGGCTCTTCGCAGTAGATACGAGGCTCTGAAGAAATCTCTTTCCAAGAAAAGGGAAGAAT  748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGACTTTAATTTACAGGCTCTTCGCAGTAGATACGAGGCTCTGAAGAAATCTCTTTCCAAGAAAAGGGAAGAAT  1258

Query  749  CTTACCTCTCGAATTCCCAAACACCCGAAAGACACAAACCAGAATTGAGCCCTACTCCCCAAAATGTACAAACA  822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CTTACCTCTCGAATTCCCAAACACCCGAAAGACACAAACCAGAATTGAGCCCTACTCCCCAAAATGTACAAACA  1332

Query  823  GATGATACGCTTAACTTTTTGGACACCTGTGATTTGCATACTGAGCATATAAAGCCATCTTTACGCACGTCCAT  896
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GATGATACGCTTAACTTTTTGGACACCTGTGATTTGCATACTGAGCATATAAAGCCATCTTTACGCACGTCCAT  1406

Query  897  CGGTGAAAGAAAACGGTCTCTTTCACCACTAATTAAGTTTTCTCCAGTGGAACAAAGATTGAGAACCACAATAG  970
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CGGTGAAAGAAAACGGTCTCTTTCACCACTAATTAAGTTTTCTCCAGTGGAACAAAGATTGAGAACCACAATAG  1480

Query  971  CATGTAGTCTTGGAGAACTACCTAATTTAAAGGAAGAAGACATTTTGAATAAGAGCCTTGATGCAAAAGAACCA  1044
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CATGTAGTCTTGGAGAACTACCTAATTTAAAGGAAGAAGACATTTTGAATAAGAGCCTTGATGCAAAAGAACCA  1554

Query 1045  CCGTCTGACTTGACAAGA  1062
            ||||||||||||||||||
Sbjct 1555  CCGTCTGACTTGACAAGA  1572