Nucleotide Global Alignment

Description

• Query: ccsbBroad304_15871
• Subject: XM_006720174.3
• Aligned Length: 1586
• Identities: 930
• Gaps: 652

Alignment

Query    1  ------------------------------------------ATGGACCACACATCACCGACCTACATGCTTGC  32
                                                      ||||||||||||||.|||||||||||||||||
Sbjct    1  ATGCACTTCAAATGCAAGTATTCCTACCCTGCTCTGTACCAGATGGACCACACATCCCCGACCTACATGCTTGC  74

Query   33  TAACTTAACCCACTTGCATTCTGAACAACTTCTGCAGGGCTTGAATCTTCTTCGCCAACATCACGAACTCTGTG  106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TAACTTAACCCACTTGCATTCTGAACAACTTCTGCAGGGCTTGAATCTTCTTCGCCAACATCACGAACTCTGTG  148

Query  107  ACATCATTCTTCGAGTAGGTGATGTTAAAATTCATGCTCACAAAGTGGTACTTGCCAGCGTCAGCCCGTATTTC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACATCATTCTTCGAGTAGGTGATGTTAAAATTCATGCTCACAAAGTGGTACTTGCCAGCGTCAGCCCGTATTTC  222

Query  181  AAAGCTATGTTCACTGGAAACCTTTCTGAAAAAGAGAACAGTGAGGTTGAGTTTCAATGCATTGATGAAACTGC  254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAAGCTATGTTCACTGGAAACCTTTCTGAAAAAGAGAACAGTGAGGTTGAGTTTCAATGCATTGATGAAACTGC  296

Query  255  TCTCCAGGCCATTGTGGAGTATGCCTATACAGGGACTGTTTTTATTTCTCAGGACACAGTTGAATCTCTCCTGC  328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCTCCAGGCCATTGTGGAGTATGCCTATACAGGGACTGTTTTTATTTCTCAGGACACAGTTGAATCTCTCCTGC  370

Query  329  CAGCAGCAAACCTACTCCAGATAAAACTTGTCCTGAAAGAATGTTGTGCATTTCTTGAAAGCCAACTTGATCCT  402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CAGCAGCAAACCTACTCCAGATAAAACTTGTCCTGAAAGAATGTTGTGCATTTCTTGAAAGCCAACTTGATCCT  444

Query  403  GGTAATTGTATTGGAATTTCTCGTTTTGCAGAAACATATGGTTGCCGTGACCTTTATTTGGCAGCCACTAAATA  476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGTAATTGTATTGGAATTTCTCGTTTTGCAGAAACATATGGTTGCCGTGACCTTTATTTGGCAGCCACTAAATA  518

Query  477  CATATGCCAGAATTTTGAAGCTGTTTGCCAGACTGAAGAGTTTTTTGAGCTTACACATGCTGACTTGGATGAAA  550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CATATGCCAGAATTTTGAAGCTGTTTGCCAGACTGAAGAGTTTTTTGAGCTTACACATGCTGACTTGGATGAAA  592

Query  551  TTGTTTCCAATGACTGTTTGAATGTAGCTACCGAAGAGACTGTTTTTTATGCATTAGAGTCTTGGATCAAGTAT  624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTGTTTCCAATGACTGTTTGAATGTAGCTACCGAAGAGACTGTTTTTTATGCATTAGAGTCTTGGATCAAGTAT  666

Query  625  GATGTACAAGAACGCCAGAAATACTTAGCACAGTTACTAAACAGTGTACGATTACCATTGTTGAGTGTTAAGTT  698
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GATGTACAAGAACGCCAGAAATACTTAGCACAGTTACTAAACAGTGTACGATTACCATTGTTGAGTGTTAAGTT  740

Query  699  TCTCACTAGACTATATGAAGCAAATCATCTTATTCGTGATGATCGCACTTGTAAACATCTTTTGAATGAAGCCC  772
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCTCACTAGACTATATGAAGCAAATCATCTTATTCGTGATGATCGCACTTGTAAACATCTTTTGAATGAAGCCC  814

Query  773  TAAAGTACCACTTTATGCCTGAACATAGACTCTCTCATCAGACAGTCTTGATGACACGACCTCGCTGTGCTCCC  846
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TAAAGTACCACTTTATGCCTGAACATAGACTCTCTCATCAGACAGTCTTGATGACACGACCTCGCTGTGCTCCC  888

Query  847  AAAGTACTTTGTGCAGTAGGAGGGAAATCTGGACTCTTTGCCTGTTTGGATAG----------------TGTGG  904
            |||||||||||||||||||||||||||||||||||||||||||||||||||||                |||  
Sbjct  889  AAAGTACTTTGTGCAGTAGGAGGGAAATCTGGACTCTTTGCCTGTTTGGATAGGCTTGCTAGCTATCCATGT--  960

Query  905  AGATGTACTTTCCT--CA-GA-ATGACTCTTGGATTGGTTTGGCACCCCTAAACATTCCTCGCTATGAATTTGG  974
             ||||| |||  ||  || || |||||.|||              |||    |.||.|                
Sbjct  961  -GATGT-CTT--CTACCATGAGATGACCCTT--------------CCC----AGATGC----------------  996

Query  975  AATATGCGTTTTAGACCAAAAAGTATATGTTATAGGTGGTATTGCAACTAATGTGCGTCCTGGCGTCACTATCA  1048
                                                                                      
Sbjct  997  --------------------------------------------------------------------------  996

Query 1049  GAAAACATGAAAATTCAGTGGAATGCTGGAATCCTGATACAAATACTTGGACTTCTCTAGAGAGAATGAATGAA  1122
                                                                                      
Sbjct  997  --------------------------------------------------------------------------  996

Query 1123  AGCCGAAGTACTCTTGGAGTAGTAGTACTTGCAGGAGAACTTTATGCCTTAGGTGGTTATGATGGACAATCTTA  1196
                                                                                      
Sbjct  997  --------------------------------------------------------------------------  996

Query 1197  TTTACAATCTGTAGAGAAGTACATTCCCAAAATAAGAAAATGGCAACCTGTGGCACCAATGACGACAACAAGAA  1270
                                                                                      
Sbjct  997  --------------------------------------------------------------------------  996

Query 1271  GTTGTTTTGCTGCAGCGGTATTGGATGGAATGATATATGCCATTGGTGGGTATGGTCCTGCCCACATGAACAGT  1344
                                                                                      
Sbjct  997  --------------------------------------------------------------------------  996

Query 1345  GTGGAGCGTTATGATCCAAGTAAGGACTCCTGGGAGATGGTTGCATCCATGGCAGATAAAAGGATTCACTTTGG  1418
                                                                                      
Sbjct  997  --------------------------------------------------------------------------  996

Query 1419  CGTGGGTGTCATGCTAGGCTTTATTTTTGTGGTGGGTGGACATAATGGAGTCTCACATTTGTCCAGCATTGAAA  1492
                                                                                      
Sbjct  997  --------------------------------------------------------------------------  996

Query 1493  GATACGATCCTCATCAATCAGTGGACTGTGTG  1524
                                            
Sbjct  997  --------------------------------  996