Construct: ORF ccsbBroad304_15871

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011030.1_s304c1, BRDN0000407695
Derived from:
ccsbBroadEn_15871
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KLHL28 (54813)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15871
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54813 KLHL28 kelch like family member 28 NM_017658.5 88.9% 88.2% 15C>A;1508_1509delAA;1527_1713del
2 human 54813 KLHL28 kelch like family member 28 XM_005267770.4 88.9% 88.2% 15C>A;1508_1509delAA;1527_1713del
3 human 54813 KLHL28 kelch like family member 28 XM_011536847.3 88.9% 88.2% 15C>A;1508_1509delAA;1527_1713del
4 human 54813 KLHL28 kelch like family member 28 XM_024449635.1 88.6% 87.5% (many diffs)
5 human 54813 KLHL28 kelch like family member 28 NM_001308112.2 86.7% 86.1% (many diffs)
6 human 54813 KLHL28 kelch like family member 28 XM_011536849.2 86.3% 85.1% (many diffs)
7 human 54813 KLHL28 kelch like family member 28 XM_017021378.1 60.2% 59.4% (many diffs)
8 human 54813 KLHL28 kelch like family member 28 XM_006720174.3 58.6% 57.8% (many diffs)
9 mouse 66689 Klhl28 kelch-like 28 XM_006516157.3 84% 88.7% (many diffs)
10 mouse 66689 Klhl28 kelch-like 28 NM_025707.3 80.8% 85.2% (many diffs)
11 mouse 66689 Klhl28 kelch-like 28 XM_006516156.3 80.8% 85.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1590
ORF length:
1524
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga ccacacatca ccgacctaca tgcttgctaa cttaacccac ttgcattctg
121aacaacttct gcagggcttg aatcttcttc gccaacatca cgaactctgt gacatcattc
181ttcgagtagg tgatgttaaa attcatgctc acaaagtggt acttgccagc gtcagcccgt
241atttcaaagc tatgttcact ggaaaccttt ctgaaaaaga gaacagtgag gttgagtttc
301aatgcattga tgaaactgct ctccaggcca ttgtggagta tgcctataca gggactgttt
361ttatttctca ggacacagtt gaatctctcc tgccagcagc aaacctactc cagataaaac
421ttgtcctgaa agaatgttgt gcatttcttg aaagccaact tgatcctggt aattgtattg
481gaatttctcg ttttgcagaa acatatggtt gccgtgacct ttatttggca gccactaaat
541acatatgcca gaattttgaa gctgtttgcc agactgaaga gttttttgag cttacacatg
601ctgacttgga tgaaattgtt tccaatgact gtttgaatgt agctaccgaa gagactgttt
661tttatgcatt agagtcttgg atcaagtatg atgtacaaga acgccagaaa tacttagcac
721agttactaaa cagtgtacga ttaccattgt tgagtgttaa gtttctcact agactatatg
781aagcaaatca tcttattcgt gatgatcgca cttgtaaaca tcttttgaat gaagccctaa
841agtaccactt tatgcctgaa catagactct ctcatcagac agtcttgatg acacgacctc
901gctgtgctcc caaagtactt tgtgcagtag gagggaaatc tggactcttt gcctgtttgg
961atagtgtgga gatgtacttt cctcagaatg actcttggat tggtttggca cccctaaaca
1021ttcctcgcta tgaatttgga atatgcgttt tagaccaaaa agtatatgtt ataggtggta
1081ttgcaactaa tgtgcgtcct ggcgtcacta tcagaaaaca tgaaaattca gtggaatgct
1141ggaatcctga tacaaatact tggacttctc tagagagaat gaatgaaagc cgaagtactc
1201ttggagtagt agtacttgca ggagaacttt atgccttagg tggttatgat ggacaatctt
1261atttacaatc tgtagagaag tacattccca aaataagaaa atggcaacct gtggcaccaa
1321tgacgacaac aagaagttgt tttgctgcag cggtattgga tggaatgata tatgccattg
1381gtgggtatgg tcctgcccac atgaacagtg tggagcgtta tgatccaagt aaggactcct
1441gggagatggt tgcatccatg gcagataaaa ggattcactt tggcgtgggt gtcatgctag
1501gctttatttt tgtggtgggt ggacataatg gagtctcaca tttgtccagc attgaaagat
1561acgatcctca tcaatcagtg gactgtgtgt nnccaacttt cttgtacaaa gtggttggta
1621agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
1681ggtggcgcgt taagtcgaca atcaacctct ggatta

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