Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15896
- Subject:
- XM_011248642.2
- Aligned Length:
- 2551
- Identities:
- 525
- Gaps:
- 1949
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTTTGGAAATTTGATCTTCACTCATCATCCCACATAGACACGCTTCTAGAGAGAGAAGATGTGACACTGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGCTAATGGATGAGGAGGATGTTCTACAGGAGTGTAAAGCACAGAACCGCAAGCTCATAGAATTTCTGTTAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCAGAATGTCTGGAAGATTTAGTCTCATTCATTATAGAAGAACCACCTCAAGATATGGATGAGAAGATCCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TACAAGTATCCAAATATATCTTGTGAGTTGCTCACATCTGATGTCTCCCAGATGAATGATAGACTGGGGGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAGTCCTTGCTAATGAAATTGTATAGCTTCCTCCTAAATGAGTCCCCCTTGAACCCACTACTCGCCAGTTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGGATTTCTTGAAAAAGAAGCGTGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTGTGGATCTCATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTATTGCTCAGGCTCTTGACATGTAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAGCCTCCACAACCCAGGCAAGATGTTCTGAATTGGCTAAATGAGGAGAGGATTATCCAGAGGCTTGTGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGTTCACCCATCGCAAGAAGAAGATCGGCATTCAAATGCCTCACAATCACTTTGTGAAATTGTTCGCCTGAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGACCAGATGTTACAAGTTCAGAACAGTACAGAGCCAGACCCCCTGCTTGCCACTCTAGAAAAGCAAGAAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATTGAGCAGCTTCTGTCAAATATTTTTCACAAGGAGAAGAATGAATCGGCCATAGTCAGTGCAATTCAGATTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCTGACTTTGCTTGAGACTCGACGGCCAACGTTTGAAGGCCATATAGAAATCTGCCCCCCGGGCATGAGTCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGCTTGTTCAGTTAACAAGAGTGTTCTTGAAGCCATCCGAGGAAGACTTGGATCTTTCCATGAACTCCTACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGAGCCACCCAAGAAAAGTGTGATGAAGACTACATGGGGTATATTGGACCCACCTGTGGGGAATACTCGATTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGTCATTAGGTTGATATCCAGCCTGCTCCAAACCAATACCAGCAGCATAAATGGAGACCTGATGGAACTGAAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCATTGGCGTCATATTGGATATGTTCTTCAAGTACACATGGAATAACTTTCTACACACGCAAGTGGAAATTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATTGCTCTCATTCTGGCCAGTCCTTTTGAGAATGCAGAGAATGGCACAATTACTGATCAAGACTCCACTGGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAATTTGTTATTGAAGCATCTTTTTCAAAAGTGTCAGTTAATAGAGCGAATACTTGAAGCCTGGGACACAAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGAAGAAACAGGCTGAAGGAGGACGACGGCATGGTTACATGGGACACCTTACGAGGATAGCTAACTGTATTGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCACAGCACTGACAAGGGTCCGAACAGTGCGTTAGTACAGCAGCTCATCAAAGATCTTCCCGATGAAGTCAGGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCGGTGGGAGACGTTCTGCACGAACTCCTTAGGAGAGACGAACAAGAGGAACACGGTAGATCTAGCCTTTTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GATTATCAGATGCAACAAATGACGTCCAATTTTATTGACCAGTTTGGCTTCAACGATGAGAAGTTTGCAGACCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGACGACATTGGCAATGTTTCTTTTGATCGGGTGTCAGATATCAACTTTACTCTCAATACAAATGAAAGTGGAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATATTGCCCTGTTTGAAGCATGTTGTAAAGAACGGATACAACAATTTGATGATGGCGGCTCTGATGAAGAGGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATCTGGGAGGAGAAGCACATTGCATTTACTCCCGAATCCCAGAGGAGGTCCAGCTCTGGCAGTACGGACAGTGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGAAAGTACAGACTCTGAAGAAGAAGATGGGGCCAAACAAGACCTGTTTGAGTCCAGCAGTGCAAACACAGAGG 1924
Query 1 -----ATGGAGGTGGACCTGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCAATGGAAACAACCCAC 69
|||||||||||.||||.|||.|||||||.|||||||||.||||||||.||||||||||||||.|||||.
Sbjct 1925 ACAAAATGGAGGTGGATCTGAATGAGCCACCCACCTGGTCAGCCAACTTTGACGTCCCAATGGAAACCACCCAT 1998
Query 70 GGTGCTCCATTGGATTCTGTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTG 143
||||||||.||.||.||.||||||||.|||||||||||||||||||||||.|||||||||||||||||.|||||
Sbjct 1999 GGTGCTCCCTTAGACTCCGTGGGATCCGATGTCTGGAGCACAGAGGAGCCAATGCCAACTAAAGAGACAGGCTG 2072
Query 144 GGCTTCTTTTTCAGAGTTCACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGG 217
||||||.||||||||||||||.||.||||||||||||||.||.|||||||||||||||||.||.||||||||||
Sbjct 2073 GGCTTCCTTTTCAGAGTTCACATCCTCCCTGAGCACAAAGGAGTCTTTAAGGAGTAATTCGCCTGTGGAAATGG 2146
Query 218 AAACCAGCACTGAACCCATGGACCCTCTGACTCCCAGTGCGGCTGCCCTGG-CAGTGCAGCCAGAAGCGGCAGG 290
||||||||||||||.||.|||||||..||||.||..||||.||||||.||| ||.| ||||||||.||..||||
Sbjct 2147 AAACCAGCACTGAATCCGTGGACCCCTTGACACCTGGTGCAGCTGCCTTGGCCACT-CAGCCAGAGGCACCAGG 2219
Query 291 CAGTGTGGCCATGGAAGCCAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGA 364
||||.|||||||||||||||||||.||.||.||.||||||||.||.|||||||||||||||||||||||.||||
Sbjct 2220 CAGTATGGCCATGGAAGCCAGCTCAGATGGGGAAGAGGATGCTGAGAGTACAGACAAGGTAACTGAGACCGTGA 2293
Query 365 TGAATGGCGGCATGAAGGAAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGGTCTTCAAAA----- 433
||||||||||||||||||||||.|||||||||||||||||.|||||||||||||||||.||||||||||
Sbjct 2294 TGAATGGCGGCATGAAGGAAACACTCAGCCTCACTGTAGACGCCAAGACAGAGACTGCAGTCTTCAAAAGAGTG 2367
Query 434 -------------GTGAGGAAGGGAAACTGTCTACCTCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCC 494
|||||||||..|||||||||||||||||||||||||||||.|||||.|||||.|||...||
Sbjct 2368 TTGAAGTCCTACCGTGAGGAAGAAAAACTGTCTACCTCTCAAGATGCTGCTTGCAAAGATGCAGAAGAGACCCC 2441
Query 495 CGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCCCGAGCAGAGGACTGGCCAACCAA 568
.|||.|.||||||||.||||||.|.||.|||..|.||||||||||.|||||||||||.|||||.|.|||.||||
Sbjct 2442 AGAGCCAGCAGAGGCCAAGTGCACAGCTCCCCTGACTCCCAGCAGTAGTCCCGAGCAAAGGACCGACCAGCCAA 2515
Query 569 GCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 603
||...|||.|.|||.|.|||||.||||||||||||
Sbjct 2516 GCATGCCAAGCGACCCATCAGTTAATGGCCCTGTA 2550
