Construct: ORF ccsbBroad304_15896

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014450.1_s304c1, BRDN0000399687
Derived from:
ccsbBroadEn_15896
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PPP6R3 (55291)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15896
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352357.2 32.4% 32.4% 1_1254del
2 human 55291 PPP6R3 protein phosphatase 6 regul... XM_024448603.1 31.9% 31.9% 1_1287del
3 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352369.2 30.7% 30.5% 1_1341del;1775_1792del
4 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352347.2 30.2% 30.1% 1_1341del;1775_1792del;1912_1941del
5 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352353.2 28% 27.8% 1_1530del;1964_1981del
6 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352355.2 26.6% 26.6% 1_1656del
7 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352374.2 26.4% 26.3% 1_1656del;2090_2107del
8 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352378.2 26.4% 26.3% 1_1656del;2090_2107del
9 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352351.2 26.2% 26.2% 1_1692del
10 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352361.2 25.7% 25.7% 1_1743del
11 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352359.2 25.5% 25.5% 1_1725del;2278_2307del
12 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352370.2 25.5% 25.3% 1_1743del;2177_2194del
13 human 55291 PPP6R3 protein phosphatase 6 regul... XM_017017977.2 25.5% 25.3% 1_1743del;2177_2194del
14 human 55291 PPP6R3 protein phosphatase 6 regul... NM_018312.5 25.3% 25.3% 1_1776del
15 human 55291 PPP6R3 protein phosphatase 6 regul... XM_006718624.2 25.3% 25.3% 1_1776del
16 human 55291 PPP6R3 protein phosphatase 6 regul... XM_024448602.1 25.1% 25% 1_1743del;2177_2194del;2314_2343del
17 human 55291 PPP6R3 protein phosphatase 6 regul... XM_006718622.3 25% 25% 1_1776del;2329_2358del
18 human 55291 PPP6R3 protein phosphatase 6 regul... XM_006718623.3 25% 25% 1_1776del;2329_2358del
19 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352358.2 24.9% 24.9% 1_1812del
20 human 55291 PPP6R3 protein phosphatase 6 regul... XM_024448601.1 24.9% 24.9% 1_1812del
21 human 55291 PPP6R3 protein phosphatase 6 regul... XM_006718621.2 24.3% 24.3% 1_1878del
22 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001164164.2 24.1% 23.6% (many diffs)
23 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001164163.2 23.8% 23.8% 1_1929del
24 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352363.2 23.8% 23.8% 1_1929del
25 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352366.2 23.8% 23.6% 1_1911del;2345_2362del
26 human 55291 PPP6R3 protein phosphatase 6 regul... XM_017017974.1 23.8% 23.6% 1_1911del;2345_2362del
27 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352350.2 23.6% 23.5% 1_1929del;2363_2380del
28 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352376.2 23.6% 23.5% 1_1929del;2363_2380del
29 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352380.2 23.6% 23.5% 1_1929del;2363_2380del
30 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352362.2 23.4% 23.4% 1_1965del
31 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352365.2 23.4% 23.4% 1_1965del
32 human 55291 PPP6R3 protein phosphatase 6 regul... XM_017017969.1 23.4% 23.4% 1_1965del
33 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352360.2 23.3% 23.2% 1_1929del;2363_2380del;2500_2529del
34 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352373.2 23.3% 23.2% 1_1929del;2363_2380del;2500_2529del
35 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352352.2 23.3% 23.2% 1_1965del;2399_2416del
36 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352371.2 23.3% 23.2% 1_1965del;2399_2416del
37 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001164162.2 23.1% 23.1% 1_1998del
38 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352348.2 23.1% 23.1% 1_1998del
39 human 55291 PPP6R3 protein phosphatase 6 regul... XM_006718614.2 23.1% 23.1% 1_1998del
40 human 55291 PPP6R3 protein phosphatase 6 regul... XM_011545141.1 23% 22.9% 1_1965del;2399_2416del;2536_2565del
41 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001164161.2 23% 23% 1_2016del
42 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352368.2 23% 23% 1_2016del
43 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352375.2 23% 23% 1_2016del
44 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352372.2 23% 22.9% 1_1998del;2432_2449del
45 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352377.2 23% 22.9% 1_1998del;2432_2449del
46 human 55291 PPP6R3 protein phosphatase 6 regul... XM_006718612.3 22.9% 22.9% 1_1998del;2551_2580del
47 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001164160.2 22.8% 22.7% 1_2016del;2450_2467del
48 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352364.2 22.8% 22.7% 1_2016del;2450_2467del
49 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352379.2 22.8% 22.7% 1_2016del;2450_2467del
50 human 55291 PPP6R3 protein phosphatase 6 regul... XM_006718608.3 22.7% 22.7% 1_2016del;2569_2598del
51 human 55291 PPP6R3 protein phosphatase 6 regul... XM_011545139.1 22.7% 22.6% 1_1998del;2432_2449del;2569_2598del
52 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352354.2 22.6% 22.4% 1_2016del;2450_2467del;2587_2616del
53 human 55291 PPP6R3 protein phosphatase 6 regul... NM_001352356.2 22.6% 22.4% 1_2016del;2450_2467del;2587_2616del
54 human 55291 PPP6R3 protein phosphatase 6 regul... XM_011545137.2 22.6% 22.4% 1_2016del;2450_2467del;2587_2616del
55 human 55291 PPP6R3 protein phosphatase 6 regul... XM_011545138.2 22.6% 22.4% 1_2016del;2450_2467del;2587_2616del
56 human 55291 PPP6R3 protein phosphatase 6 regul... NR_147965.2 12.2% 1_1929del;2363_2518del;2689_4908del
57 human 55291 PPP6R3 protein phosphatase 6 regul... NR_147970.2 12.1% 1_1965del;2399_2554del;2725_4944del
58 human 55291 PPP6R3 protein phosphatase 6 regul... NR_147968.2 11.8% 1_2111del;2545_2700del;2871_5090del
59 human 55291 PPP6R3 protein phosphatase 6 regul... NR_147969.2 11.5% 1_2378del;2982_5201del
60 human 55291 PPP6R3 protein phosphatase 6 regul... NR_147971.2 11.3% 1_2505del;3109_5328del
61 human 55291 PPP6R3 protein phosphatase 6 regul... NR_147966.2 11.2% 1_2517del;2951_2968del;3139_5358del
62 human 55291 PPP6R3 protein phosphatase 6 regul... NR_147967.2 11.2% 1_2388del;2822_2977del;3148_5367del
63 mouse 52036 Ppp6r3 protein phosphatase 6, regu... NM_001164159.1 21.1% 22% (many diffs)
64 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XM_006531796.1 21.1% 22% (many diffs)
65 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XM_017318250.1 21% 21.7% (many diffs)
66 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XM_017318249.1 20.8% 21.7% (many diffs)
67 mouse 52036 Ppp6r3 protein phosphatase 6, regu... NM_029456.2 20.7% 21.5% (many diffs)
68 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XM_006531794.1 20.7% 21.4% (many diffs)
69 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XM_011248642.2 20.5% 21.2% (many diffs)
70 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XM_017318248.1 20.4% 21.2% (many diffs)
71 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XM_011248641.1 20.2% 20.9% (many diffs)
72 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XM_006531792.1 20.1% 20.9% (many diffs)
73 mouse 52036 Ppp6r3 protein phosphatase 6, regu... NM_028999.1 20% 20.8% (many diffs)
74 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XM_011248640.1 20% 20.7% (many diffs)
75 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XM_006531789.1 19.9% 20.5% (many diffs)
76 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XR_001782603.1 14.6% (many diffs)
77 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XR_001782601.1 10.2% (many diffs)
78 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XR_001782602.1 9.9% (many diffs)
79 mouse 52036 Ppp6r3 protein phosphatase 6, regu... XR_001782600.1 9.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
669
ORF length:
603
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga ggtggacctg agtgaaccac ccaactggtc agctaacttt gatgtcccaa
121tggaaacaac ccacggtgct ccattggatt ctgtgggatc tgatgtctgg agcacagagg
181agccgatgcc aactaaagag acgggctggg cttctttttc agagttcacg tcttccctga
241gcacaaaaga ttctttaagg agtaattctc cagtggaaat ggaaaccagc actgaaccca
301tggaccctct gactcccagt gcggctgccc tggcagtgca gccagaagcg gcaggcagtg
361tggccatgga agccagctct gacggagagg aggatgcaga aagtacagac aaggtaactg
421agacagtgat gaatggcggc atgaaggaaa cgctcagcct cactgtagat gccaagacag
481agactgcggt cttcaaaagt gaggaaggga aactgtctac ctctcaagat gctgcttgta
541aagacgcaga ggagtgtccc gagactgcag aggcgaagtg cgcggcgccc aggcctccca
601gcagcagtcc cgagcagagg actggccaac caagcgcacc aggtgacact tcagtgaatg
661gccctgtatn nccaactttc ttgtacaaag tggttggtaa gcctatccct aaccctctcc
721tcggtctcga ttctacgtag taatgagcta gcgctaaccg gtggcgcgtt aagtcgacaa
781tcaacctctg gatta

Download FASTA (ORF) (Full)