Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15896
- Subject:
- XM_017318249.1
- Aligned Length:
- 2515
- Identities:
- 525
- Gaps:
- 1913
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTTTGGAAATTTGATCTTCACTCATCATCCCACATAGACACGCTTCTAGAGAGAGAAGATGTGACACTGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGCTAATGGATGAGGAGGATGTTCTACAGGAGTGTAAAGCACAGAACCGCAAGCTCATAGAATTTCTGTTAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCAGAATGTCTGGAAGATTTAGTCTCATTCATTATAGAAGAACCACCTCAAGATATGGATGAGAAGATCCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TACAAGTATCCAAATATATCTTGTGAGTTGCTCACATCTGATGTCTCCCAGATGAATGATAGACTGGGGGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAGTCCTTGCTAATGAAATTGTATAGCTTCCTCCTAAATGAGTCCCCCTTGAACCCACTACTCGCCAGTTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGATTGTGGATTTCTTGAAAAAGAAGCGTGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTGTGGATCTCATTATAAAGCACATAGGAACTTCTGCTATCATGGATTTATTGCTCAGGCTCTTGACATGTAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAGCCTCCACAACCCAGGCAAGATGTTCTGAATTGGCTAAATGAGGAGAGGATTATCCAGAGGCTTGTGGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGTTCACCCATCGCAAGAAGAAGATCGGCATTCAAATGCCTCACAATCACTTTGTGAAATTGTTCGCCTGAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGACCAGATGTTACAAGTTCAGAACAGTACAGAGCCAGACCCCCTGCTTGCCACTCTAGAAAAGCAAGAAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATTGAGCAGCTTCTGTCAAATATTTTTCACAAGGAGAAGAATGAATCGGCCATAGTCAGTGCAATTCAGATTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCTGACTTTGCTTGAGACTCGACGGCCAACGTTTGAAGGCCATATAGAAATCTGCCCCCCGGGCATGAGTCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGCTTGTTCAGTTAACAAGAGTGTTCTTGAAGCCATCCGAGGAAGACTTGGATCTTTCCATGAACTCCTACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGAGCCACCCAAGAAAAGTGTGATGAAGACTACATGGGGTATATTGGACCCACCTGTGGGGAATACTCGATTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGTCATTAGGTTGATATCCAGCCTGCTCCAAACCAATACCAGCAGCATAAATGGAGACCTGATGGAACTGAAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCATTGGCGTCATATTGGATATGTTCTTCAAGTACACATGGAATAACTTTCTACACACGCAAGTGGAAATTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATTGCTCTCATTCTGGCCAGTCCTTTTGAGAATGCAGAGAATGGCACAATTACTGATCAAGACTCCACTGGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAATTTGTTATTGAAGCATCTTTTTCAAAAGTGTCAGTTAATAGAGCGAATACTTGAAGCCTGGGACACAAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGAAGAAACAGGCTGAAGGAGGACGACGGCATGGTTACATGGGACACCTTACGAGGATAGCTAACTGTATTGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCACAGCACTGACAAGGGTCCGAACAGTGCGTTAGTACAGCAGCTCATCAAAGATCTTCCCGATGAAGTCAGGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCGGTGGGAGACGTTCTGCACGAACTCCTTAGGAGAGACGAACAAGAGGAACACGGTAGATCTAATGCAACAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATGACGTCCAATTTTATTGACCAGTTTGGCTTCAACGATGAGAAGTTTGCAGACCAAGACGACATTGGCAATGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTCTTTTGATCGGGTGTCAGATATCAACTTTACTCTCAATACAAATGAAAGTGGAAATATTGCCCTGTTTGAAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CATGTTGTAAAGAACGGATACAACAATTTGATGATGGCGGCTCTGATGAAGAGGATATCTGGGAGGAGAAGCAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATTGCATTTACTCCCGAATCCCAGAGGAGGTCCAGCTCTGGCAGTACGGACAGTGAAGAAAGTACAGACTCTGA 1850
Query 1 -------------------------------------------------------------ATGGAGGTGGACC 13
|||||||||||.|
Sbjct 1851 AGAAGAAGATGGGGCCAAACAAGACCTGTTTGAGTCCAGCAGTGCAAACACAGAGGACAAAATGGAGGTGGATC 1924
Query 14 TGAGTGAACCACCCAACTGGTCAGCTAACTTTGATGTCCCAATGGAAACAACCCACGGTGCTCCATTGGATTCT 87
|||.|||.|||||||.|||||||||.||||||||.||||||||||||||.|||||.||||||||.||.||.||.
Sbjct 1925 TGAATGAGCCACCCACCTGGTCAGCCAACTTTGACGTCCCAATGGAAACCACCCATGGTGCTCCCTTAGACTCC 1998
Query 88 GTGGGATCTGATGTCTGGAGCACAGAGGAGCCGATGCCAACTAAAGAGACGGGCTGGGCTTCTTTTTCAGAGTT 161
||||||||.|||||||||||||||||||||||.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct 1999 GTGGGATCCGATGTCTGGAGCACAGAGGAGCCAATGCCAACTAAAGAGACAGGCTGGGCTTCCTTTTCAGAGTT 2072
Query 162 CACGTCTTCCCTGAGCACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAACCAGCACTGAACCCA 235
|||.||.||||||||||||||.||.|||||||||||||||||.||.||||||||||||||||||||||||.||.
Sbjct 2073 CACATCCTCCCTGAGCACAAAGGAGTCTTTAAGGAGTAATTCGCCTGTGGAAATGGAAACCAGCACTGAATCCG 2146
Query 236 TGGACCCTCTGACTCCCAGTGCGGCTGCCCTGG-CAGTGCAGCCAGAAGCGGCAGGCAGTGTGGCCATGGAAGC 308
|||||||..||||.||..||||.||||||.||| ||.| ||||||||.||..||||||||.|||||||||||||
Sbjct 2147 TGGACCCCTTGACACCTGGTGCAGCTGCCTTGGCCACT-CAGCCAGAGGCACCAGGCAGTATGGCCATGGAAGC 2219
Query 309 CAGCTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAACTGAGACAGTGATGAATGGCGGCATGAAGG 382
||||||.||.||.||.||||||||.||.|||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 2220 CAGCTCAGATGGGGAAGAGGATGCTGAGAGTACAGACAAGGTAACTGAGACCGTGATGAATGGCGGCATGAAGG 2293
Query 383 AAACGCTCAGCCTCACTGTAGATGCCAAGACAGAGACTGCGGTCTTCAAAAGTGAGGAAGGGAAACTGTCTACC 456
||||.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||||..||||||||||||
Sbjct 2294 AAACACTCAGCCTCACTGTAGACGCCAAGACAGAGACTGCAGTCTTCAAAAGTGAGGAAGAAAAACTGTCTACC 2367
Query 457 TCTCAAGATGCTGCTTGTAAAGACGCAGAGGAGTGTCCCGAGACTGCAGAGGCGAAGTGCGCGGCGCCCAGGCC 530
|||||||||||||||||.|||||.|||||.|||...||.|||.|.||||||||.||||||.|.||.|||..|.|
Sbjct 2368 TCTCAAGATGCTGCTTGCAAAGATGCAGAAGAGACCCCAGAGCCAGCAGAGGCCAAGTGCACAGCTCCCCTGAC 2441
Query 531 TCCCAGCAGCAGTCCCGAGCAGAGGACTGGCCAACCAAGCGCACCAGGTGACACTTCAGTGAATGGCCCTGTA 603
|||||||||.|||||||||||.|||||.|.|||.||||||...|||.|.|||.|.|||||.||||||||||||
Sbjct 2442 TCCCAGCAGTAGTCCCGAGCAAAGGACCGACCAGCCAAGCATGCCAAGCGACCCATCAGTTAATGGCCCTGTA 2514
