Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15923
- Subject:
- NR_110734.1
- Aligned Length:
- 3400
- Identities:
- 1005
- Gaps:
- 2395
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCATTCCAGTTTGGCAACTTCACTTGTAGGGCTGTTTTAATCAAGCTGCCCAAAGTCCCCCAATCACTCCTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AATACACAGAGAGAGGCAGCAGCTTGCTCAGCGGACAAGGATGCTGGGCGTGAGGGACCAAGGCCTGCCCTGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCGGGCCTCCTCCAGCCAGTGCTGACCAGGGACTTCTGACCTGCTGGCCAGCCAGGACCTGTGTGGGGAGGCC 222
Query 1 ---------------------------------------------------------------------ATGGA 5
|||||
Sbjct 223 CTCCTGCTGCCTTGGGGTGACAATCTCAGCTCCAGGCTACAGGGAGACCGGGAGGATCACAGAGCCAGCATGGA 296
Query 6 TCCTGACAGTGATCAACCTCTGAACAGCCTCGATGTCAAACCCCTGCGCAAACCCCGTATCCCCATGGAGACCT 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCCTGACAGTGATCAACCTCTGAACAGCCTCGATGTCAAACCCCTGCGCAAACCCCGTATCCCCATGGAGACCT 370
Query 80 TCAGAAAGGTGGGGATCCCCATCATCATAGCACTACTGAGCCTGGCGAGTATCATCATTGTGGTTGTCCTCATC 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCAGAAAGGTGGGGATCCCCATCATCATAGCACTACTGAGCCTGGCGAGTATCATCATTGTGGTTGTCCTCATC 444
Query 154 AAGGTGATTCTGGATAAATACTACTTCCTCTGCGGGCAGCCTCTCCACTTCATCCCGAGGAAGCAGCTGTGTGA 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGGTGATTCTGGATAAATACTACTTCCTCTGCGGGCAGCCTCTCCACTTCATCCCGAGGAAGCAGCTGTGTGA 518
Query 228 CGGAGAGCTGGACTGTCCCTTGGGGGAGGACGAGGAGCACTGTGTCAAGAGCTTCCCCGAAGGGCCTGCAGTGG 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGGAGAGCTGGACTGTCCCTTGGGGGAGGACGAGGAGCACTGTGTCAAGAGCTTCCCCGAAGGGCCTGCAGTGG 592
Query 302 CAGTCCGCCTCTCCAAGGACCGATCCACACTGCAGGTGCTGGACTCGGCCACAGGGAACTGGTTCTCTGCCTGT 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGTCCGCCTCTCCAAGGACCGATCCACACTGCAGGTGCTGGACTCGGCCACAGGGAACTGGTTCTCTGCCTGT 666
Query 376 TTCGACAACTTCACAGAAGCTCTCGCTGAGACAGCCTGTAGGCAGATGGGCTACAGCAGCAAACCCACTTTCAG 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCGACAACTTCACAGAAGCTCTCGCTGAGACAGCCTGTAGGCAGATGGGCTACAGCAGCAAACCCACTTTCAG 740
Query 450 AGCTGTGGAGATTGGCCCAGACCAGGATCTGGATGTTGTTGAAATCACAGAAAACAGCCAGGAGCTTCGCATGC 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCTGTGGAGATTGGCCCAGACCAGGATCTGGATGTTGTTGAAATCACAGAAAACAGCCAGGAGCTTCGCATGC 814
Query 524 GGAACTCAAGTGGGCCCTGTCTCTCAGGCTCCCTGGTCTCCCTGCACTGTCTTGCCTGTGGGAAGAGCCTGAAG 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGAACTCAAGTGGGCCCTGTCTCTCAGGCTCCCTGGTCTCCCTGCACTGTCTTGCCTGTGGGAAGAGCCTGAAG 888
Query 598 ACCCCCCGTGTGGTGGGTGGGGAGGAGGCCTCTGTGGATTCTTGGCCTTGGCAGGTCAGCATCCAGTACGACAA 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACCCCCCGTGTGGTGGGTGGGGAGGAGGCCTCTGTGGATTCTTGGCCTTGGCAGGTCAGCATCCAGTACGACAA 962
Query 672 ACAGCACGTCTGTGGAGGGAGCATCCTGGACCCCCACTGGGTCCTCACGGCAGCCCACTGCTTCAGGAAACATA 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACAGCACGTCTGTGGAGGGAGCATCCTGGACCCCCACTGGGTCCTCACGGCAGCCCACTGCTTCAGGAAACATA 1036
Query 746 CCGATGTGTTCAACTGGAAGGTGCGGGCAGGCTCAGACAAACTGGGCAGCTTCCCATCCCTGGCTGTGGCCAAG 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCGATGTGTTCAACTGGAAGGTGCGGGCAGGCTCAGACAAACTGGGCAGCTTCCCATCCCTGGCTGTGGCCAAG 1110
Query 820 ATCATCATCATTGAATTCAACCCCATGTACCCCAAAGACAATGACATCGCCCTCATGAAGCTGCAGTTCCCACT 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATCATCATCATTGAATTCAACCCCATGTACCCCAAAGACAATGACATCGCCCTCATGAAGCTGCAGTTCCCACT 1184
Query 894 CACTTTCTCAGGCACAGTCAGGCCCATCTGTCTGCCCTTCTTTGATGAGGAGCTCACTCCAGCCACCCCACTCT 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CACTTTCTCAGGCACAGTCAGGCCCATCTGTCTGCCCTTCTTTGATGAGGAGCTCACTCCAGCCACCCCACTCT 1258
Query 968 GGATCATTGGATGGGGCTTTACGAAGCAGAATGGAGGG------------------------------------ 1005
||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGATCATTGGATGGGGCTTTACGAAGCAGAATGGAGGGTGACAGTGGTGGGCCCCTGATGTACCAATCTGACCA 1332
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1333 GTGGCATGTGGTGGGCATCGTTAGTTGGGGCTATGGCTGCGGGGGCCCGAGCACCCCAGGAGTATACACCAAGG 1406
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1407 TCTCAGCCTATCTCAACTGGATCTACAATGTCTGGAAGGCTGAGCTGTAATGCTGCTGCCCCTTTGCAGTGCTG 1480
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1481 GGAGCCGCTTCCTTCCTGCCCTGCCCACCTGGGGATCCCCCAAAGTCAGACACAGAGCAAGAGTCCCCTTGGGT 1554
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1555 ACACCCCTCTGCCCACAGCCTCAGCATTTCTTGGAGCAGCAAAGGGCCTCAATTCCTATAAGAGACCCTCGCAG 1628
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1629 CCCAGAGGCGCCCAGAGGAAGTCAGCAGCCCTAGCTCGGCCACACTTGGTGCTCCCAGCATCCCAGGGAGAGAC 1702
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1703 ACAGCCCACTGAACAAGGTCTCAGGGGTATTGCTAAGCCAAGAAGGAACTTTCCCACACTACTGAATGGAAGCA 1776
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1777 GGCTGTCTTGTAAAAGCCCAGATCACTGTGGGCTGGAGAGGAGAAGGAAAGGGTCTGCGCCAGCCCTGTCCGTC 1850
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1851 TTCACCCATCCCCAAGCCTACTAGAGCAAGAAACCAGTTGTAATATAAAATGCACTGCCCTACTGTTGGTATGA 1924
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1925 CTACCGTTACCTACTGTTGTCATTGTTATTACAGCTATGGCCACTATTATTAAAGAGCTGTGTAACATCTCTGG 1998
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 1999 CATAGGCTAGCTGGAATGCTTGATAAGAACTGAGCTGGGATGATTGAACTTTCATTCTTTGGCTTGGGGAGAAA 2072
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2073 AGAAGTCCTGGGGAAGCAATTGAGTCTCAAAGTAGAGGCAGGGGAAAAAAGAGTTAGGGAGACCAGATCTGCTG 2146
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2147 AGTGGCAGCAAGAGTGAGCTGCAGATTACAGAAACCAGGGTGAGCAAGTTTGAGTCCCACACAGGGCCTTCTCC 2220
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2221 CTTTGCCTCTTTCCCTCCCTCCCTGCCTGTGATAATCAGCCAGGAGCCAGGGATAACCTATGACTTGGGAAAGA 2294
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2295 GATGAGTTAGGCAGTCAAGGGTGACATTCAATCAGGGATCCACAAGTGGCTGGAAAGAAATGCTGGTCCTGTGT 2368
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2369 CCTAACTTTTTCCGCCTGGAGAGCCCTCAGTGTGGCTTCTTACATTTAAAAAACAAAAAGGATCAGCTGCCAGG 2442
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2443 TGTGAGGCAGTCCCCAAGCTGAGTTGTGAGGATGTAAGCATGAATAAGTCCCTGCACTCAAAATGGTCAAAGAA 2516
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2517 TTAAACCCCATGGACTTTTTTGGCATCTGTATGAAAGCTTGGGTTTTCTGAGGACTGTCTTGCTATAGTTAAGT 2590
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2591 CAGATCCTAGATGAAATATACTTGTTCATACTGTACTAGGTTCTTAGGAAACAACAGAATTCCTCAAATGCCAA 2664
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2665 AAACAAAGAAAATAGAAACCCAGAAAACAAAACAAAATAAAACAAAACCATCAGAACTGTGAGTGGAAACTAAG 2738
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2739 GTGATGATCTGGGAGCAATACACTAAAATCTTGGGTCGAGACCTATATGAAGGCTGGCAGTGGAGCTAAACCTG 2812
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2813 GACACACTGAAGACAAGGGAGCTGAACCAGGGCTCCTACATGAAGCAGGGATAACTGATGGCAGTAAATGTGGT 2886
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2887 CTCAAATTGCAGATGGTCTGGAGGAAAATTTCCCAAATTTAGAGCCTCAGGATTCCCAAAGATCCTCCAAATAT 2960
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 2961 GAGCTCACAATCAAAGATCAGAGACGTTGAAAAATAAAAAACACCTTAAGTGGGCAGCATAAAAAACAGCTAAT 3034
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3035 TTAGAACCCCAAAGGCTTCAGATGTCAGAATATTAGAGACTTATGATAATAAGCAATATTTGCAGAGTATTTGT 3108
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3109 ATGTGCCAGACACTATTGTAAGTGCTTCATCATGTACTGATTCATTTAATACTCACAGAAATCTGTGAGATGGG 3182
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3183 TATTATTCTTATCCTCACTCTATGGATTAAAAAAACTAAGGCACAAAGTGGTTAAGCTCCTTGCCTGAGATTAT 3256
Query 1006 -------------------------------------------------------------------------- 1005
Sbjct 3257 AGACTGTAAGTTGAACGTGAGCACTTGGAATACAGAGTTCATGCTGTAAACTACCACACTATAGGGCCTCCAAT 3330
Query 1006 ---------------------------------------------------------------------- 1005
Sbjct 3331 ATGATAATTTATAAAATATTTGAATAAAAAATGAATACTAGTTCCACATTTTAAAAAAAAAAAAAAAAAA 3400
