Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15966
- Subject:
- XR_001740231.1
- Aligned Length:
- 2513
- Identities:
- 1251
- Gaps:
- 1262
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGAAGTGGAAGTAGAAGGCGGTGGCTGAGGCGGTTCCGGAGGTTCTAGTGTCGGAGTTGGGTGCAGGCAGGTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATGGGCCCGCTTGAGGCACACTGAGGGGACGCGGGGCTGGGCCATGGCCGGCGCTCGGGCCGCCGCCGCCGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCTCGGCGGGGTCCTCGGCCTCTTCAGGCAACCAGCCGCCTCAGGAGCTGGGGCTTGGGGAGCTGCTGGAGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTCTCCCGGACTCAGTACCGGGCCAAGGATGGCAGCGGGACCGGCGGCTCTAAGTCGTCTTATCGCCAGACCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGGGCTTCCTGTCAGCTCAGGCCATCCCCACCCTAAGCACTGGCTGGCAGTGCGGTGGGAATCTTGCCGACC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGCCATCTCATTCCCCCACGTGGTTTTGGCAGCTTTAGCACCAAGTTTTCCAGTGGAATTCTGTTCCATCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACCACAGAACTCTGATTTGACCTCAGAGATTACCGTTGAGCGCATTGAGAAGAGATGTCTGGAGCTGTTTGGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGAGACTACTGTTTCAGCGTGATTCCAAACACGAATGGGGATATCTGTGGCCACTATCCCCGGCACATCGTGTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTGGAGTATGAGAGTTCTGAGAAGGAGAAAGACACGTTTGAGAGTACCGTACAGGTGAGCAAGTTGCAAGACC 666
Query 1 -----------------ATGGCCCGGTGCAGAGGACGGTTTGTCTGCCCAGTAATCCTGTTCAAGGGCAAGCAC 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCATCCACCGCAGCAAGATGGCCCGGTGCAGAGGACGGTTTGTCTGCCCAGTAATCCTGTTCAAGGGCAAGCAC 740
Query 58 ATTTGCAGGTCGGCCACACTGGCTGGATGGGGAGAGCTGTATGGACGCTCAGGCTACAACTATTTTTTCTCAGG 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATTTGCAGGTCGGCCACACTGGCTGGATGGGGAGAGCTGTATGGACGCTCAGGCTACAACTATTTTTTCTCAGG 814
Query 132 GGGTGCAGATGATGCCTGGGCAGATGTGGAGGACGTCACGGAGGAGGACTGTGCTCTTCGAAGTGGTGACACGC 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGGTGCAGATGATGCCTGGGCAGATGTGGAGGACGTCACGGAGGAGGACTGTGCTCTTCGAAGTGGTGACACGC 888
Query 206 ATCTTTTTGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACCTGTCAGTCAAATACATCTGTGACCTG 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCTTTTTGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACCTGTCAGTCAAATACATCTGTGACCTG 962
Query 280 ATGGTGGAGAACAAGAAGGTGAAGTTTGGCATGAATGTAACCTCCTCTGAGAAGGTGGACAAAGCCCAGCGCTA 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATGGTGGAGAACAAGAAGGTGAAGTTTGGCATGAATGTAACCTCCTCTGAGAAGGTGGACAAAGCCCAGCGCTA 1036
Query 354 TGCCGACTTCACTCTCCTCTCCATCCCGTATCCAGGCTGTGAATTTTTCAAGGAATATAAAGATCGGGATTACA 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGCCGACTTCACTCTCCTCTCCATCCCGTATCCAGGCTGTGAATTTTTCAAGGAATATAAAGATCGGGATTACA 1110
Query 428 TGGCAGAAGGGCTCATATTTAACTGGAAGCAGGACTACGTTGATGCCCCATTGAGCATCCCCGACTTCCTGACT 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGGCAGAAGGGCTCATATTTAACTGGAAGCAGGACTACGTTGATGCCCCATTGAGCATCCCCGACTTCCTGACT 1184
Query 502 CACTCTCTGAACATTGACTGGAGCCAGTATCAGTGTTGGGATCTGGTGCAACAAACACAAAACTACCTGAAGCT 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CACTCTCTGAACATTGACTGGAGCCAGTATCAGTGTTGGGATCTGGTGCAACAAACACAAAACTACCTGAAGCT 1258
Query 576 GCTGCTTTCCTTAGTTAACAGTGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGATCGGACCC 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCTGCTTTCCTTAGTTAACAGTGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGATCGGACCC 1332
Query 650 CCCTCTTCATCTCCCTCCTGCGCCTTTCCTTGTGGGCTGATGGGCTCATCCACACGTCCCTGAAGCCCACTGAG 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCTCTTCATCTCCCTCCTGCGCCTTTCCTTGTGGGCTGATGGGCTCATCCACACGTCCCTGAAGCCCACTGAG 1406
Query 724 ATCCTCTACCTCACTGTGGCCTATGACTGGTTCCTCTTCGGGCACATGTTGGTAGATCGGCTCAGCAAAGGGGA 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ATCCTCTACCTCACTGTGGCCTATGACTGGTTCCTCTTCGGGCACATGTTGGTAGATCGGCTCAGCAAAGGGGA 1480
Query 798 GGAGATTTTCTTCTTCTGCTTCAATTTTTTGAAGCATATTACCTCCGAGGAGTTCTCTGCTCTGAAGACCCAGA 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GGAGATTTTCTTCTTCTGCTTCAATTTTTTGAAGCATATTACCTCCGAGGAGTTCTCTGCTCTGAAGACCCAGA 1554
Query 872 GGAGGAAGAGTTTGCCAGCCCGGGATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAGACGAAAGGACCGT 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGAGGAAGAGTTTGCCAGCCCGGGATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAGACGAAAGGACCGT 1628
Query 946 GGCAGCACCACCAGCCTTGGCAGCGACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCACTGGGAGCTTCAC 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGCAGCACCACCAGCCTTGGCAGCGACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCACTGGGAGCTTCAC 1702
Query 1020 CTATGAGGCCGTGGAGCTGGTCCCAGCAGGAGCGCCAACTCAGGCAGCTTG----------------------- 1070
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CTATGAGGCCGTGGAGCTGGTCCCAGCAGGAGCGCCAACTCAGGCAGCTTGATCAGTGGACCATCCCCTGCCCG 1776
Query 1071 -------------------------------------------------------------------------- 1070
Sbjct 1777 GATCCTCTCTCTCCACAGACTATGGCAGCTGGCAGATGGTAACGGGCTGTGGCAGTATTCAGGAGCGGGCTGTC 1850
Query 1071 -----------------------------------------------------------GCTTGCAGCCCTGAG 1085
|||||||||||||||
Sbjct 1851 CTGCACACAGACTCCTCTCTCCCTTTCAGCTTCCCGGATGAGCTCCCTAACAGTTGTCTGCTTGCAGCCCTGAG 1924
Query 1086 TGATCGAGAGACTCGGCTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTACAGCAGCACAGTGGGGCTTCGGG 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TGATCGAGAGACTCGGCTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTACAGCAGCACAGTGGGGCTTCGGG 1998
Query 1160 CAGTAGCCCCCAGTCCTTCCGGTGCCATCGGGGGCCTGCTGGAGCAATTTGCCCGTGGTGTTGGACTCCGGAGC 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CAGTAGCCCCCAGTCCTTCCGGTGCCATCGGGGGCCTGCTGGAGCAATTTGCCCGTGGTGTTGGACTCCGGAGC 2072
Query 1234 ATCAGCAGCAATGCCTTG-------------------------------------------------------- 1251
||||||||||||||||||
Sbjct 2073 ATCAGCAGCAATGCCTTGTGAAGAAGCCAGCCCATGACATTTTCCTGCTCCTCTCTCAGCTGAGCCCTTAGCAG 2146
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 2147 AGAATCAAAGCCATGCCTGGCCGAAGGGGTACTTCCAGGTCAGGGGAAATTTCAGTCCCCCATCTCCATCATGA 2220
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 2221 ACATGGCAGCCCCAAAGCTGAGCAAGGCCAAAGACAGGGTTTTCCAACCCCCAGCCTCTTGACTGGTGACCACC 2294
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 2295 ACCCCTTCTTGTCACTGTCTCCCACCCACCCCATCTTTGCTGGGATTCCCATCAACTCTCAGAACTGTGTGGGG 2368
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 2369 TTTCCCTGGGGCCTTGTGGAAGCCATGACTTCACAAAGACCCTACCTGTCAGTTCTTGTTTCTGGGGAGGAGGG 2442
Query 1252 ----------------------------------------------------------------------- 1251
Sbjct 2443 ATCACCTGCACTGAGAATGAGGCAGTTTGACACAGATCACAAAATAAAATCAAAGTCTTTTTGAATAGCCA 2513
