Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15979
- Subject:
- NR_156761.1
- Aligned Length:
- 3337
- Identities:
- 163
- Gaps:
- 3174
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTACGCTCTTCCAGCTGTCGGACCTGGGAAATTCTCCTGTGCTAAATCCCGTGGCGCTCGCGGGTGTCGCCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGCATCCTGGGAGTTGTAGTTTTTTCTACTCAGAGGGAGAATAGCTCCAGACGGGAGCAGGACGCTGAGAGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTACATGCAGGAGGCGGGGTCCAGGGCGAGGGATCTACGCAGCTTGCGGTGGCGAAGGCGGCTTTAGTGGCAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGAAGCGCACCCCGACTGCCGAGGAACGAGAGCGCGAAGCTAAGAAACTGAGGCTTCTTGAAGAGCTTGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACTTGGCTCCCTTATCTGACCCCCAAAGATGATGAATTCTATCAGCAGGCCCTGAAGAGGAAAGTGAGGATGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCTCATCTCGAAGGCAGGGATCCTGATATTTGGCATGTTGGTTTTAAGATCTCATGGGACATAGAGACACCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTTTGGCGATACCCCTTCACCAAGGAGACTGCTATTTCATGCTTGACAAATGCTGTGCTTCATGAAGTTAAAAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAGGGGCTCCCCGTGGAACAAAGGAATGAAATCTTGACTGCCATCCTTGCCTCGCTCACTGCACGCCAGAACC 592
Query 1 ----------ATGGCATGCCAGGGCAGAGAGGAGTGTTGGTGCCAGTCACGAATTGCCCGAACATTACCTGCTG 64
||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 593 TGAGGAGAGAATGGCATGCCA-----------------GGTGCCAGTCACGAATTGCCCGAACATTACCTGCTG 649
Query 65 ATCAGAAGCCAGAATGTCGGCCATACTGGGAAAAGGATGATGCTTCGATGCCTCTGCCGTTTGACCTCACAGAC 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 650 ATCAGAAGCCAGAATGTCGGCCATACTGGGAAAAGGATGATGCTTCGATGCCTCTGCCGTTTGACCTCACAGAC 723
Query 139 ATCGTTTCAGAACTCAGAGGTCAGCTTCTGGAAGCAAAACCC-------------------------------- 180
||||||||||||||||||||||||||||||||||||||||||
Sbjct 724 ATCGTTTCAGAACTCAGAGGTCAGCTTCTGGAAGCAAAACCCTAGAAGGAGCACAAGTCTCAGGCGGAGGAGAA 797
Query 181 -------------------------------------------------------------------------- 180
Sbjct 798 AAAGAGATCGGCTTTTCTCCTCCAACGTTGTCATGGGCTTAAGCAAGAGCAGTGGAGACTTCTCTTGGCCCCTA 871
Query 181 -------------------------------------------------------------------------- 180
Sbjct 872 GATTGTAGCACCCGGGTCCCAATCCAAAACAGCTAGGAAATGGTGCCCATGAAGTTTTAAATGTTTTAAAATGA 945
Query 181 -------------------------------------------------------------------------- 180
Sbjct 946 CCCTGTGTTATAGTCTGATTTGGTGTTAAACAGGACCTTCTTCCCCCAAAATTGTTCAGATTATAAAATGTGAG 1019
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1020 CCATTCAGCCCCCAAGGTCCAGGGCAGGCGACAGGAACGAGCCCAGCGTGTGACAAAGCCTAACCTACTTTCCT 1093
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1094 CTTTCCCAAGCTTTTTCAGAGACTCTGGAGTGGACCCAGCCCTCTGGGGAAAGACAGAACTTAGAGACATCCCA 1167
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1168 GTTACTCACCACACCCATAGTGCTGTCCAATATGGTAGCCACTAGCTAGCTGTGGCTACTTCAATTTAAATTCA 1241
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1242 GTTTTAATTTTAATTAAAAATGCAGCTCTTCAGTCGCCCTGGCCACATTTCAAGTGCTTAACAGCCTCATGTGG 1315
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1316 CTAGTGACTGCTGTATTGGACGGTACAGATATGGAACATTTTCATCATCGAAGAAAGTCCTATTGGACAACACT 1389
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1390 TCTATAAAAAGTTTGAGAGCAGGAATTCTCATTTCCATTCGTCTGTAGCTTCTATCCCCAAAGGCAAAGAAACT 1463
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1464 AAAAGAGAAATGACTCATTGAAGATTGGCCTCTTTCCTTTCTCTAAGACAAACCTAAGTAAAAGCCTGAGCTTT 1537
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1538 GAGTCCTATGCTCAGCACACGGGAAGGAGATGTTAATAATTAAAATAAAGTTGATATCCTGTCTTTAGGGAGTT 1611
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1612 CCCTTGATCTCTTGAAAGAGACACAGCCCCATTTACATTATTTCGTGGATTTCACCAGCATAGTATAGTTTTTT 1685
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1686 TCTGTAAGTCCCTCATTCTTATGTAATAACAGGTGGAACTGAGGTTTGAAGAACCTCAGTGGCCCATCCTGATG 1759
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1760 ACATTGGAGACTCAAAGAGACAAGAGAGAGTAGGGTTTAAAACCTGAGCTTTAAGACTCCCACTAGCTTCGTGT 1833
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1834 CCTTTGGCATGTTAACGTGCCTCAGTTTCCTCATCTGTATAATGGGGATATATGAAAGGCACCAGTCCTAAGGT 1907
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1908 GAACATTAAGTGAGATGATTCTAGTTACAGACTTAGAACAATTTCCAGCACATAGTTAAATATCCAGGAAATTC 1981
Query 181 -------------------------------------------------------------------------- 180
Sbjct 1982 TGGTACTGTTATGTGTGGGTGAGCTGACCTGGATGTAGATGTTTTCCTCTCTCTTGCTGACCCCTCCGCCAGTT 2055
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2056 TTGTCTTGTGATGCCATTAACACATCTCTCCCTTTCTGACCTGGCTCCTGCCCATTGGTGTCCCAAGAAATCGT 2129
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2130 GAGAATAGTTAGCCCCCCGTCTCCCCAGCCTGTTGCTTTCTCGTGTAGTTGTTCACAGTAGTTGAGAAGTTGAA 2203
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2204 GAGCTTTTGCCTATTGAAGGTGCACTGAGAATAAACTCTTTCCTGCCACCAGAATTGCAGTGGTTCACGGCCTG 2277
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2278 CACTCATTCCCATGAATGCAGTTAATAGCCACAGAAATGTCACATTAAGCAAAGCAGCCAGGGTCTCATCGTGT 2351
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2352 TGAGACTCGAGTCTCTCAGACCTTGGATTCATTCCCTGGTGTCTTTGAGCCTCAGTTTCCTCATTGGTAAAAGA 2425
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2426 GAAGTGAAGCAGTGTCTCACAGGGTCATTACAGAGATTAAATGAAATAAATGAAATAACATAGACCAGGAGGGC 2499
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2500 GTGGTGTTTAAAAGTCACAGATGGGGCACCCTCGGGCCATCCAGCCCAGTGTTTTCTTTAGCCCCTATGATGTT 2573
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2574 CATTTTTTGTTATATCCCATTAGGTGCCCATATTTAAAAATTGGGAGATTTCACATAAAATTAAAAGGTCTGCA 2647
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2648 TTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTTGAGACACAGTCTCACTCTGTCACCAGGCTAGAGTGCAGTGGC 2721
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2722 ACGATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGG 2795
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2796 GACTACAGGCACGTGCCACCACGCCCAGCTAATTTTTGTATTTTTAGCAGAGATGGGGTTTCACCACATTGGCC 2869
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2870 AGGATGGTCTCGATCTCAACCTCGTGATCCACCCACCTCGGTCTCCCAAAGCGCTGGGATTACAGGCGTGAGCC 2943
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2944 ACCGCGCCAAGCCAAGGTCTGCATTTTTCTTTAGAACTCAGAACACCCAATAGTCCTAGGCCCCCATCCTCGCA 3017
Query 181 -------------------------------------------------------------------------- 180
Sbjct 3018 TGGCAGCAAGCTAAATAAGCATCTTCCCACTGCGAGTTGGGGCATGACCCAGCCTATGGTTTGCCATACTCCCT 3091
Query 181 -------------------------------------------------------------------------- 180
Sbjct 3092 CTTTTTCTCCGTTTTTTCATTAATTGTGAACCTGACCTGCATCACCCTTTCATGTCAGTGCTCTCCAAACCTGC 3165
Query 181 -------------------------------------------------------------------------- 180
Sbjct 3166 TTGCTTGCACCCCTCTAGTCGAAATATTTTGTGCTTACCCCAATATATGTGTGTGACTATTGAACTCTATTCGT 3239
Query 181 -------------------------------------------------------------------------- 180
Sbjct 3240 AGACTGCTTGTACTAATGTCATTTGCATCATAAAATATTCATATCCAATAAACATATTAAAAGGATGAGATAAG 3313
Query 181 ------- 180
Sbjct 3314 AAACCGA 3320
