Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15997
Subject:
XM_011513187.3
Aligned Length:
2895
Identities:
388
Gaps:
2499

Alignment

Query    1  ------------------------------------ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC  38
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGGAAGCGGAATTTAAGGACCATAGTACAGCTATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC  74

Query   39  AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG  112
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG  148

Query  113  TCTACAGTGGTTCAGACCGACATGCTGT------------ACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT  174
            ||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||
Sbjct  149  TCTACAGTGGTTCAGACCGACATGCTGTACAGGTAATTCAACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT  222

Query  175  CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA  248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA  296

Query  249  TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC  322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC  370

Query  323  CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTGT-AAGTTC---------CCTAAATTTTTT  386
            ||||||||||||||||||||||||||||||||||||||||||||.| ||..||         ||||.|      
Sbjct  371  CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTATCAACCTCTCCACTTCTCCTACA------  438

Query  387  TTTCCTG--GATTTAAAA----TTT-------------------------------------------------  405
               ||||  .|.||||.|    .||                                                 
Sbjct  439  ---CCTGCACAGTTAATAAGCCGTTCCCAGGCTTCCAGTTCTACCAGCGGCAGTATTACCCAACAGACTATGTT  509

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  510  ACTAGGGAGTACTTCCCCTACCCTAACGGCAAGCCAAGCTCAAATGTATCTCCGAGCTCAAATGGTTCAGAATT  583

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  584  TAACATTACGCAGCCAGAAGTTGGGTGTATTATCTAGCTCACAGAATGGTCCACCAAAAAGCACTAGTCAAACT  657

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  658  CAGTCATTGACAATTTGTCATAACAAAACAACAGTGACCAGTTCTAAAATCAGCCAACGAGATCCTTCTCCAGA  731

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  732  AAGTAATAAGAAAGGAGAGAGCCCAAGCCTGGAATCACGAAGCACAGCTGTCACCCGGACATCAAGTATTCACC  805

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  806  AGTTAATAGCACCAGCTTCATATTCTCCAATTCAGCCTCATTCTCTAATAAAACATCAGCAGATTCCTCTTCAT  879

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  880  TCACCACCTTCCAAAGTTTCCCATCATCAGCTGATATTACAACAGCAGCAACAGCAAATTCAGCCAATCACACT  953

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  954  TCAGAATTCAACTCAAGACCCACCCCCATCCCAGCACTGTATACCACTCCAGAACCATGGCCTTCCTCCAGCTC  1027

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1028  CCAGTAATGCCCAGTCACAGCATTGTTCACCGATTCAGAGTCATCCCTCTCCTTTAACAGTGTCTCCTAATCAG  1101

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1102  TCACAGTCAGCACAGCAGTCTGTAGTGGTGTCTCCTCCACCACCTCATTCACCAAGTCAGTCTCCTACTATAAT  1175

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1176  TATTCATCCACAAGCACTTATTCAGCCACACCCTCTTGTGTCATCAGCTCTCCAGCCAGGGCCAAATTTGCAGC  1249

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1250  AGTCCACTGCTAATCAGGTGCAAGCTACAGCACAGTTGAATCTTCCATCCCATCTTCCACTTCCAGCTTCCCCT  1323

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1324  GTTGTACACATTGGCCCAGTTCAGCAGTCTGCCTTGGTATCCCCAGGCCAGCAGATTGTCTCTCCATCACACCA  1397

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1398  GCAATATTCATCCCTGCAGTCCTCTCCAATCCCAATTGCAAGTCCTCCACAGATGTCGACATCTCCTCCAGCTC  1471

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1472  AGATTCCACCACTGCCCTTGCAGTCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTGTCCCAGGGCCAGGTT  1545

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1546  TTGGTGCAGAATGCTTTGGTGTCAGAAGAGGAACTTCCAGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGAC  1619

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1620  TCTTCCTCCTCCACAGACTGTTGCGGTAAACCTACAAGTGCAACCACCAGCACCTGTTGATCCACCAGTGGTTT  1693

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1694  ATCAGGTAGAAGATGTGTGTGAAGAAGAAATGCCAGAAGAGTCAGATGAATGTGTCCGGATGGATAGAACCCCA  1767

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1768  CCACCACCCACTTTGTCTCCAGCAGCTATAACAGTGGGGAGAGGAGAAGATTTGACTTCTGAACATCCTTTGTT  1841

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1842  AGAGCAAGTGGAATTACCTGCTGTGGCATCAGTCAGTGCTTCAGTAATTAAATCTCCATCAGATCCCTCACATG  1915

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1916  TTTCTGTTCCACCACCTCCATTGTTACTTCCAGCTGCCACCACAAGGAGTAACAGTACATCTATGCACAGTAGC  1989

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1990  ATTCCCAGTATAGAGAACAAACCTCCACAGGCTATTGTTAAACCACAGATCCTAACCCATGTTATTGAAGGCTT  2063

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2064  TGTGATTCAGGAGGGATTGGAGCCATTTCCTGTGAGTCGTTCCTCTTTGCTAATAGAACAGCCTGTGAAAAAAC  2137

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2138  GGCCTCTTTTGGATAATCAGGTGATAAATTCAGTGTGTGTTCAGCCAGAGCTACAGAATAATACAAAACATGCG  2211

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2212  GATAATTCATCTGACACAGAGATGGAAGACATGATTGCTGAAGAGACATTAGAAGAAATGGACAGTGAGTTGCT  2285

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2286  CAAGTGTGAATTCTGTGGGAAAATGGGATATGCTAATGAATTTTTGCGGTCAAAACGATTCTGCACTATGTCAT  2359

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2360  GTGCCAAAAGGTACAATGTTAGCTGTTCTAAAAAATTTGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAA  2433

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2434  AGTCTTGGGCATCGTGGCCGTCGTCCAAGTGGCCCTGATGGGGCAGCGAGAGAACATATCCTTAGGCAGCTTCC  2507

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2508  AATTACTTATCCATCTGCAGAAGAAGACTTGGCTTCTCATGAAGATTCTGTGCCATCTGCTATGACAACTCGTC  2581

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2582  TGCGCAGGCAGAGCGAGCGGGAAAGAGAACGTGAGCTTCGGGATGTGAGAATTCGGAAAATGCCTGAGAACAGT  2655

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2656  GACTTGCTACCAGTTGCACAAACAGAGCCATCTATATGGACAGTTGATGATGTCTGGGCCTTCATCCATTCTTT  2729

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2730  GCCTGGCTGCCAGGATATCGCAGATGAATTCAGAGCACAGGAGATTGATGGACAGGCCCTTCTCTTGCTGAAAG  2803

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2804  AAGACCATCTCATGAGTGCAATGAATATCAAGCTAGGCCCAGCCCTGAAGATCTGTGCACGCATCAACTCTCTG  2877

Query  406  ---------  405
                     
Sbjct 2878  AAGGAATCT  2886

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