Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15997
- Subject:
- XM_011513188.3
- Aligned Length:
- 2874
- Identities:
- 394
- Gaps:
- 2469
Alignment
Query 1 ------------------------------------ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC 38
||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGAAGCGGAATTTAAGGACCATAGTACAGCTATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC 74
Query 39 AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG 148
Query 113 TCTACAGTGGTTCAGACCGACATGCTGT------------ACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT 174
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 149 TCTACAGTGGTTCAGACCGACATGCTGTACAGGTAATTCAACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT 222
Query 175 CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA 296
Query 249 TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC 370
Query 323 CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTGTAAGTT-----CCC--------------- 376
||||||||||||||||||||||||||||||||||||||||||||.|.|.|| |||
Sbjct 371 CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTCTGATTTTCACACCCGCTACCACTGTGGCT 444
Query 377 ----TAAATT-----------------------------TTTTTTTCCTG------------------GATTTA 399
||.|.| |..|.|||||| |.||.|
Sbjct 445 GCTGTACAGTCTGACATTCCTGTTGTCTCGTCGTCATCGTCATCTTCCTGTCAGTCTGCAGCTACTCAGGTTCA 518
Query 400 AAATTT-------------------------------------------------------------------- 405
.|||||
Sbjct 519 GAATTTAACATTACGCAGCCAGAAGTTGGGTGTATTATCTAGCTCACAGAATGGTCCACCAAAAAGCACTAGTC 592
Query 406 -------------------------------------------------------------------------- 405
Sbjct 593 AAACTCAGTCATTGACAATTTGTCATAACAAAACAACAGTGACCAGTTCTAAAATCAGCCAACGAGATCCTTCT 666
Query 406 -------------------------------------------------------------------------- 405
Sbjct 667 CCAGAAAGTAATAAGAAAGGAGAGAGCCCAAGCCTGGAATCACGAAGCACAGCTGTCACCCGGACATCAAGTAT 740
Query 406 -------------------------------------------------------------------------- 405
Sbjct 741 TCACCAGTTAATAGCACCAGCTTCATATTCTCCAATTCAGCCTCATTCTCTAATAAAACATCAGCAGATTCCTC 814
Query 406 -------------------------------------------------------------------------- 405
Sbjct 815 TTCATTCACCACCTTCCAAAGTTTCCCATCATCAGCTGATATTACAACAGCAGCAACAGCAAATTCAGCCAATC 888
Query 406 -------------------------------------------------------------------------- 405
Sbjct 889 ACACTTCAGAATTCAACTCAAGACCCACCCCCATCCCAGCACTGTATACCACTCCAGAACCATGGCCTTCCTCC 962
Query 406 -------------------------------------------------------------------------- 405
Sbjct 963 AGCTCCCAGTAATGCCCAGTCACAGCATTGTTCACCGATTCAGAGTCATCCCTCTCCTTTAACAGTGTCTCCTA 1036
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1037 ATCAGTCACAGTCAGCACAGCAGTCTGTAGTGGTGTCTCCTCCACCACCTCATTCACCAAGTCAGTCTCCTACT 1110
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1111 ATAATTATTCATCCACAAGCACTTATTCAGCCACACCCTCTTGTGTCATCAGCTCTCCAGCCAGGGCCAAATTT 1184
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1185 GCAGCAGTCCACTGCTAATCAGGTGCAAGCTACAGCACAGTTGAATCTTCCATCCCATCTTCCACTTCCAGCTT 1258
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1259 CCCCTGTTGTACACATTGGCCCAGTTCAGCAGTCTGCCTTGGTATCCCCAGGCCAGCAGATTGTCTCTCCATCA 1332
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1333 CACCAGCAATATTCATCCCTGCAGTCCTCTCCAATCCCAATTGCAAGTCCTCCACAGATGTCGACATCTCCTCC 1406
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1407 AGCTCAGATTCCACCACTGCCCTTGCAGTCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTGTCCCAGGGCC 1480
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1481 AGGTTTTGGTGCAGAATGCTTTGGTGTCAGAAGAGGAACTTCCAGCTGCAGAAGCTTTGGTCCAGTTGCCATTT 1554
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1555 CAGACTCTTCCTCCTCCACAGACTGTTGCGGTAAACCTACAAGTGCAACCACCAGCACCTGTTGATCCACCAGT 1628
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1629 GGGAATGCATTTGAACCAGTGTCATCTGCACAAAGTTTTTTCTCTTAAGGTTTATCAGGTAGAAGATGTGTGTG 1702
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1703 AAGAAGAAATGCCAGAAGAGTCAGATGAATGTGTCCGGATGGATAGAACCCCACCACCACCCACTTTGTCTCCA 1776
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1777 GCAGCTATAACAGTGGGGAGAGGAGAAGATTTGACTTCTGAACATCCTTTGTTAGAGCAAGTGGAATTACCTGC 1850
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1851 TGTGGCATCAGTCAGTGCTTCAGTAATTAAATCTCCATCAGATCCCTCACATGTTTCTGTTCCACCACCTCCAT 1924
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1925 TGTTACTTCCAGCTGCCACCACAAGGAGTAACAGTACATCTATGCACAGTAGCATTCCCAGTATAGAGAACAAA 1998
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1999 CCTCCACAGGCTATTGTTAAACCACAGATCCTAACCCATGTTATTGAAGGCTTTGTGATTCAGGAGGGATTGGA 2072
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2073 GCCATTTCCTGTGAGTCGTTCCTCTTTGCTAATAGAACAGCCTGTGAAAAAACGGCCTCTTTTGGATAATCAGG 2146
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2147 TGATAAATTCAGTGTGTGTTCAGCCAGAGCTACAGAATAATACAAAACATGCGGATAATTCATCTGACACAGAG 2220
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2221 ATGGAAGACATGATTGCTGAAGAGACATTAGAAGAAATGGACAGTGAGTTGCTCAAGTGTGAATTCTGTGGGAA 2294
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2295 AATGGGATATGCTAATGAATTTTTGCGGTCAAAACGATTCTGCACTATGTCATGTGCCAAAAGGTACAATGTTA 2368
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2369 GCTGTTCTAAAAAATTTGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAAAGTCTTGGGCATCGTGGCCGT 2442
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2443 CGTCCAAGTGGCCCTGATGGGGCAGCGAGAGAACATATCCTTAGGCAGCTTCCAATTACTTATCCATCTGCAGA 2516
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2517 AGAAGACTTGGCTTCTCATGAAGATTCTGTGCCATCTGCTATGACAACTCGTCTGCGCAGGCAGAGCGAGCGGG 2590
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2591 AAAGAGAACGTGAGCTTCGGGATGTGAGAATTCGGAAAATGCCTGAGAACAGTGACTTGCTACCAGTTGCACAA 2664
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2665 ACAGAGCCATCTATATGGACAGTTGATGATGTCTGGGCCTTCATCCATTCTTTGCCTGGCTGCCAGGATATCGC 2738
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2739 AGATGAATTCAGAGCACAGGAGATTGATGGACAGGCCCTTCTCTTGCTGAAAGAAGACCATCTCATGAGTGCAA 2812
Query 406 -------------------------------------------------------------- 405
Sbjct 2813 TGAATATCAAGCTAGGCCCAGCCCTGAAGATCTGTGCACGCATCAACTCTCTGAAGGAATCT 2874