Nucleotide Global Alignment

Description

Query:
ccsbBroad304_16027
Subject:
NR_132428.1
Aligned Length:
3375
Identities:
1104
Gaps:
2224

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTCTGAACGGGACCCTGCAGGTCTTCCGCCTGCTGTTGCATTAAATTTGGGGGTGGAAGAGGCTTCTGCGTTGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCCTTACCCGCAACGATGACCATGGCTTTGCCTTCTTTAAAATTGAGGCCTCCAACTCTGACGCTGACTGGAGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATTGAAACCCGAACACACATTGGGCTCTTTTGGCACTTGACTAGAGCTAAAACCTCGGGATTCAGCGGGCAAGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTTGCTCAGCAACGGCGCGTAGGCTGTGTGCGGTTGGCTGGAGCCAGACCCCACCCCGGCCTCGGCCCATGCTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TAGAGGGGACGTTGCCCCAATCCTGAAGGACTTCGGCACTCGAGACCTGTGGATGCCGCGTTGCTGTGGCCTGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGGGGTGATCATGAAGCCAGGTGCTACTGGCGAGTCCGATTTGGCCGAAGTGCTGCCCCAGCACAAGTTCGACA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCAAGTCCCTGGAGGCCTACCTAAACCAGCACTTGTCTGGCTTTGGGGCCGAACGTGAGGCTACGCTGACCATT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCCCAGTACAGAGCAGGAAAGTCCAATCCAACCTTTTATCTCCAGAAGGGCTTTCAAACATATGTGCTCAGGAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAAACCACCAGGTTCACTTCTTCCTAAAGCACATCAGATTGATAGAGAATTTAAAGTCCAGAAAGCCTTGTTTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CAATTGGATTCCCCGTTCCCAAGCCTATACTGTACTGCAGTGATACTTCTGTCATTGGAACAGAATTTTACGTA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATGGAACATGTGCAGGGTCGAATCTTCCGTGATTTAACAATTCCTGGACTTAGCCCAGCAGAACGTTCAGCCAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATATGTGGCCACGGTAGAAACATTGGCTCAGTTACATTCCTTGAATATACAGTCACTGCAGCTGGAAGGATATG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTATAGGTGCTGGGTACTGCAAAAGACAGGTATCAACCTGGACAAAGCAATATCAAGCTGCAGCTCATCAGGAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ATCCCTGCCATGCAACAGCTATCGGAGTGGCTAATGAAGAACTTGCCCGATAATGACAATGAAGAGAATTTGAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TCATGGAGATTTCAGACTAGATAACATAGTTTTCCACCCTAAAGAGTGTCGAGTTATAGCAGTGCTGGATTGGG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGCTGTCAACCATTGGTCATCCTTTGTCAGACTTAGCTCATTTTTCCCTGTTCTACTTTTGGCCAAGGACAGTT  1184

Query    1  ---ATGAAACAACACA--TTCTTCCAGCTGAAAA------------------GGAGGTAACTGAGTTC--TATG  49
               ||||.|.|.|| |  |||||..|| ||||||                  |||.| ||||||.|||  |||.
Sbjct 1185  CCAATGATAAATCA-AGGTTCTTATAG-TGAAAACTCAGGGATACCATCAATGGAAG-AACTGATTTCAATATA  1255

Query   50  TT-------CA----AAATGAAAATTC-----------AGTGGA-------------------------CAAG-  75
            ||       ||    ||.|   |||||           |.||||                         .||| 
Sbjct 1256  TTGCCGCTGCAGGGGAATT---AATTCTATTCTTCCTAACTGGAATTTCTTTCTTGCCCTTTCATATTTTAAGA  1326

Query   76  TGG--GGAAAACCTTTAGTGATT--------GATAAACTCAAGGAAATGGCCAAAGTC----GAGGGTCTCTGG  135
            |||  ||||.|.| ..||.||.|        ||||...||..||||||     ||.||    ||||.|      
Sbjct 1327  TGGCTGGAATAGC-ACAGGGAGTATATAGCAGATATCTTCTGGGAAAT-----AATTCATCTGAGGAT------  1388

Query  136  AACTTGTT-TTTGCCA-------------GCTGTCAG----CGGACT-CAGC------CACG------------  172
            |.|||.|| |||||||             .|||.|||    .||||| ||.|      .|||            
Sbjct 1389  AGCTTTTTATTTGCCAATATTGTGCAACCTCTGGCAGAAACTGGACTACAACTCTCCAAACGAACTTTCAGTAC  1462

Query  173  TGGACTATGCC-----TTGAT--TGCTGAA--------------------GAAA---CAGGAAAATGCTT-TTT  215
            ||.||||  ||     |||||  |.|||.|                    ||||   |||| ||.|.||| ||.
Sbjct 1463  TGTACTA--CCACAGATTGATACTACTGGACAGTTGTTTGTACAGACTCGGAAAGGTCAGG-AAGTTCTTATTA  1533

Query  216  TGCTCCAG-ATGTCTTTAA----------CTGCCAAGC--ACCAGACACAGGGAATATGGAGGTTCTGCACCTG  276
            .|.|..|| ||.||.|.||          ||.|| |||  |..|||||||||||||||||||||||||||||||
Sbjct 1534  AGGTGAAGCATTTCATGAAACAACACATTCTTCC-AGCTGAAAAGACACAGGGAATATGGAGGTTCTGCACCTG  1606

Query  277  TATGGAAGTGAGGAACAGAAGAAACAGTGGCTTGAGCCTCTTCTTCAAGGGAACATTACCTCTTGCTTCTGTAT  350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1607  TATGGAAGTGAGGAACAGAAGAAACAGTGGCTTGAGCCTCTTCTTCAAGGGAACATTACCTCTTGCTTCTGTAT  1680

Query  351  GACAGAACCTGATGTAGCTTCAAGTGATGCCACGAATATTGAATGCAGCATCCAACGAGATGAAGATAGCTATG  424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1681  GACAGAACCTGATGTAGCTTCAAGTGATGCCACGAATATTGAATGCAGCATCCAACGAGATGAAGATAGCTATG  1754

Query  425  TAATTAACGGCAAAAAATGGTGGAGCAGTGGAGCTGGGAATCCCAAGTGCAAAATTGCAATTGTTTTGGGAAGA  498
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1755  TAATTAACGGCAAAAAATGGTGGAGCAGTGGAGCTGGGAATCCCAAGTGCAAAATTGCAATTGTTTTGGGAAGA  1828

Query  499  ACTCAAAATACTTCTCTCTCCAGACACAAACAGCACAGCATGATTCTTGTTCCCATGAACACACCTGGAGTAAA  572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1829  ACTCAAAATACTTCTCTCTCCAGACACAAACAGCACAGCATGATTCTTGTTCCCATGAACACACCTGGAGTAAA  1902

Query  573  AATAATAAGGCCTTTGTCAGTTTTTGGCTACACAGATAATTTTCATGGAGGACATTTTGAGATCCATTTTAATC  646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1903  AATAATAAGGCCTTTGTCAGTTTTTGGCTACACAGATAATTTTCATGGAGGACATTTTGAGATCCATTTTAATC  1976

Query  647  AAGTGCGAGTTCCTGCCACAAATCTAATACTAGGTGAAGGTAGGGGATTTGAAATTTCCCAAGGCCGCCTTGGA  720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1977  AAGTGCGAGTTCCTGCCACAAATCTAATACTAGGTGAAGGTAGGGGATTTGAAATTTCCCAAGGCCGCCTTGGA  2050

Query  721  CCTGGCAGAATCCACCACTGTATGAGAACAGTAGGTTTGGCGGAACGCGCTTTGCAGATCATGTGTGAGCGGGC  794
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2051  CCTGGCAGAATCCACCACTGTATGAGAACAGTAGGTTTGGCGGAACGCGCTTTGCAGATCATGTGTGAGCGGGC  2124

Query  795  AACACAAAGGATAGCTTTCAAGAAGAAGTTGTATGCACATGAGGTTGTGGCTCACTGGATTGCTGAAAGCCGCA  868
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2125  AACACAAAGGATAGCTTTCAAGAAGAAGTTGTATGCACATGAGGTTGTGGCTCACTGGATTGCTGAAAGCCGCA  2198

Query  869  TTGCCATTGAGAAGATCCGCTTGTTGACTCTGAAAGCTGCTCACAGCATGGACACTCTGGGCAGTGCTGGCGCT  942
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2199  TTGCCATTGAGAAGATCCGCTTGTTGACTCTGAAAGCTGCTCACAGCATGGACACTCTGGGCAGTGCTGGCGCT  2272

Query  943  AAGAAAGAGATTGCAATGATCAAAGTGGCTGCCCCACGGGCTGTCAGCAAAATCGTTGACTGGGCCATCCAGGT  1016
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2273  AAGAAAGAGATTGCAATGATCAAAGTGGCTGCCCCACGGGCTGTCAGCAAAATCGTTGACTGGGCCATCCAGGT  2346

Query 1017  GTGCGGAGGTGCTGGTGTTTCCCAGGATTACCCTCTGGCTAACATGTATGCTATAACCCGAGTTTTGCGTTTAG  1090
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2347  GTGCGGAGGTGCTGGTGTTTCCCAGGATTACCCTCTGGCTAACATGTATGCTATAACCCGAGTTTTGCGTTTAG  2420

Query 1091  CAGATGGACCTGACGAAGTTCATCTTTCAGCAATCGCAACAATGGAGCTGCGGGACCAAGCCAAAAGACTGACA  1164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2421  CAGATGGACCTGACGAAGTTCATCTTTCAGCAATCGCAACAATGGAGCTGCGGGACCAAGCCAAAAGACTGACA  2494

Query 1165  GCCAAGATA-----------------------------------------------------------------  1173
            |||||||||                                                                 
Sbjct 2495  GCCAAGATATAAGGAGGGTGGCACTGCCACATCCCACTGGCAGAAACTCTCCTTTATACAAACTTCATTGGCTC  2568

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 2569  CAACATTTGAATCTCATATTTTTGTAGCAGTTTGAGCACAGGGTTAATTATTCATTTGTGGTAAAGATTATAGC  2642

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 2643  ATCTATTTTGATCAGTGGGTTTTATTATTTCAAGGGTCACACAGGGTTAAGTTCAGTAAGAAATGCTGTAGCTG  2716

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 2717  TTGTCATTCAATCTAGTGCCTCCTTGAGGCCAGGAGTTCAGGACCAGCCTGGGCAACATAGCGAGACCCCCATT  2790

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 2791  GCTACAAAAAATTTAAAAATGAAACAAGTGTGGTGGCACATGCTTGTAGTCCTAGCTACTTGGGAGGCTGAGGC  2864

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 2865  AGGAGGATTGCTTGAGTCTAGGAGTTTGAGGTTACAGTAAGCTGTGATCGTGACATGGCCTCCAGCCTGGGTGA  2938

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 2939  CCGAGTGAGACTGTTTCTAAAAATAAAAACAAAAAATAAATTTCTTCTTGAGGTGGGGTGGAGGTGGGGAGCAA  3012

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 3013  GAATTTGACCTGGCTCTGATCCCTGGTGTGTTGTGTGGGCCTCTTTAACGTTTGCCACTGAGCCTTAACCTCAC  3086

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 3087  TGTACTTCACTGTACTTCACACGCATTGGTGTTAACATTTTAATCTTAGAAGACCCTGACCCACTGAGGGTTTG  3160

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 3161  TTGTGAGAATTGCTGAAGCCACGTAGAAGCACCTTGAAATCTGTAAAACCACAAGAAAGTACTTTATAAAAGGT  3234

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 3235  ATCCTTATTTGAAGTGGATAAATCTTGTAACTCGAAAAGTTGTGATTTAGAAGACAGGATTGTTTTTGAACATT  3308

Query 1174  ---------------------------------------------  1173
                                                         
Sbjct 3309  AGGAATTAAAGGCTATATCTGGTCCTTACAAAAAAAAAAAAAAAA  3353

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