Nucleotide Global Alignment

Description

Query:
ccsbBroad304_16077
Subject:
NM_001323263.1
Aligned Length:
1863
Identities:
220
Gaps:
1641

Alignment

Query    1  ATGCCGTCTGAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGCCAGAGGCTCTGCCACTCCGAATCTCACAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGACAGTGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGGCATCCTCTGCGACATCACCCTGATTGCTGAGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AACAGAAATTCCATGCTCACAAGGCAGTCCTAGCAGCATGCAGT---GACTATTTCCGGGCAATGTTCAGTCTT  219
                                                 ||| .||   ||         ||||||||||||||||
Sbjct    1  -------------------------------------ATG-GGTATAGA---------GGCAATGTTCAGTCTT  27

Query  220  TGTATGGTGGAAAGTGGAGCTGATGAGGTTAATTTGCACGGTGTGACCAGCCTTGGCTTAAAGCAGGCTCTGGA  293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   28  TGTATGGTGGAAAGTGGAGCTGATGAGGTTAATTTGCACGGTGTGACCAGCCTTGGCTTAAAGCAGGCTCTGGA  101

Query  294  GTTTGCATACACAGGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGATGTGCTAGCAGCGGGCAGTCACCTAC  367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  102  GTTTGCATACACAGGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGATGTGCTAGCAGCGGGCAGTCACCTAC  175

Query  368  AGCTGTTGGAGCTTCTCAATTTATGCTCCCACTATCTCATCCAGG---------------------TGGAG---  417
            |||||||||||||||||||||||||||||||||||||||||||||                     ||||.   
Sbjct  176  AGCTGTTGGAGCTTCTCAATTTATGCTCCCACTATCTCATCCAGGAATTAAATAGCTTTAATTACTTGGATCTG  249

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  250  TACAGACTTGCTGACCTCTTTAACCTCACTTTGTTGGAGAAGGCAGTGATCGATTTCTTAGTGAAACATCTCTC  323

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  324  TGAACTCCTGAAGAGCCGCCCAGAAGAAGTTCTAACGCTTCCCTATTGCCTGCTTCAGGAGGTGCTGAAGAGCG  397

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  398  ACCGCCTGACCTCCCTGAGTGAAGAGCAGATCTGGCAGCTAGCTGTGAGGTGGTTGGAACACAACTGCCACTAC  471

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  472  CAGTACATGGACGAGCTCCTGCAATACATCCGCTTTGGCCTAATGGATGTGGATACTCTCCATACAGTTGCCCT  545

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  546  GTCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCA  619

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  620  TCTATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTCTGTATATCATTGGT  693

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  694  GGGAAAAAGCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAGAATGCTCTCAT  767

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  768  AGCTGCCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGG  841

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  842  GGGACTTCCTGTTTGTGGCAGGAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTGCTGTGAGGACTGCCTGT  915

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  916  CGCTATGACCCCCGCAGTAATTCCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGGAGCATTTTGTGCTGGG  989

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  990  TGCCATGGAGGAATACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCCAGGTTCTGCCTACAGTTGAGCGAT  1063

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1064  ATTGCCCCAAGAAGAACAAATGGACTTTTGTTCAGTCCTTTGACAGATCCCTTTCATGCCATGCTGGATATGTG  1137

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1138  GCTGATGGTCTTCTTTGGATATCAGGTGGAGTAACTAATACGGCACAATATCAGAACAGGCTAATGGTGTATGA  1211

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1212  ACCTAACCAGAATAAGTGGATAAGCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTGTAC  1285

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1286  AAAGGAAGCTTTATGTTCTTGGAGGCAATGACCTAGACTACAATAATGACCGGATCCTTGTGCGCCATATAGAT  1359

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1360  TCTTACAACATAGACACTGACCAGTGGACACGTTGTAATTTCAACCTGCTGACTGGCCAAAATGAATCTGGAGT  1433

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1434  TGCTGTCCATAATGGGAGAATATATTTAGTTGGTGGATATTCAATTTGGACAAATGAGCCTCTGGCTTGTATCC  1507

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1508  AGGTACTGGATGTAAGCAGAGAAGGCAAAGAAGAAGTATTCTATGGGCCTACACTCCCTTTTGCTTCCAATGGA  1581

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1582  ATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACATGCCCTAACCTTCAAACTCTTCAAGTGCCTCATCACAG  1655

Query  418  -------------  417
                         
Sbjct 1656  GATTGGCACCATC  1668

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