Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16077
- Subject:
- NR_104421.1
- Aligned Length:
- 2864
- Identities:
- 417
- Gaps:
- 2447
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGTCTGAACCCGCCCCGGGGGTGCCAAGGTGCGTCTCCAGTCTGACGCGACCGCCTGGGGCGGAGTCAGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACGTGCCACCTGCAGTGCTGGCTAGGGCTTTTTATTTACTAGGGAGCAGTTTCCCCGCGCGACAGTTCGGGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCGCAGGCAGTCGCGCGCACACACGCACGCAGGCACACACACACACACACACACACACACACACACACTTTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACACACAAACACGCTAGGACGCTCGTCTTCGCTACTGCATCCCCGAACCAGCAGAGCGAAGCTACTGCGGGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGTTAACCTCAGCATCGTGGGGCGAAGCAGAGCCATTGTGCATCAAGGAGAGGCCGGTGCCTGCGCTGCCGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTGGCACCTAACCCAGCAGACCGCTCACCCCATCGGCTGGAATGCTTGCTGATTCCTCTGCACACTTCTAAGG 444
Query 1 ----------------------------ATGCCGTCTGAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGCC 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGAGAACCTGAGGAACCCAGCTGGAAAATGCCGTCTGAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGCC 518
Query 47 AGAGGCTCTGCCACTCCGAATCTCACAATGACAGTGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGGCATC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGAGGCTCTGCCACTCCGAATCTCACAATGACAGTGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGGCATC 592
Query 121 CTCTGCGACATCACCCTGATTGCTGAGGAACAGAAATTCCATGCTCACAAGGCAGTCCTAGCAGCATGCAGTGA 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTCTGCGACATCACCCTGATTGCTGAGGAACAGAAATTCCATGCTCACAAGGCAGTCCTAGCAGCATGCAGTGA 666
Query 195 CTATTTCCGGGCAATGTTCAGTCTTTGTATGGTGGAAAGTGGAGCTGATGAGGTTAATTTGCACGGTGTGACCA 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTATTTCCGGGCAATGTTCAGTCTTTGTATGGTGGAAAGTGGAGCTGATGAGGTTAATTTGCACGGTGTGACCA 740
Query 269 GCCTTGGCTTAAAGCAGGCTCTGGAGTTTGCATACACAGGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGAT 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCCTTGGCTTAAAGCAGGCTCTGGAGTTTGCATACACAGGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGAT 814
Query 343 GTGCTAGCAGCGGGCAGTCACCTACAGCTGTTGGAGCTTCTCAATTTATGCTCCCACTATCTCATCCAGGTGGA 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTGCTAGCAGCGGGCAGTCACCTACAGCTGTTGGAGCTTCTCAATTTATGCTCCCACTATCTCATCCAGGTGGA 888
Query 417 G------------------------------------------------------------------------- 417
|
Sbjct 889 GTAACTAATACGGCACAATATCAGAACAGGCTAATGGTGTATGAACCTAACCAGAATAAGTGGATAAGCCGTAG 962
Query 418 -------------------------------------------------------------------------- 417
Sbjct 963 CCCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAAGGAAGCTTTATGTTCTTGGAGGCAATG 1036
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1037 ACCTAGACTACAATAATGACCGGATCCTTGTGCGCCATATAGATTCTTACAACATAGACACTGACCAGTGGACA 1110
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1111 CGTTGTAATTTCAACCTGCTGACTGGCCAAAATGAATCTGGAGTTGCTGTCCATAATGGGAGAATATATTTAGT 1184
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1185 TGGTGGATATTCAATTTGGACAAATGAGCCTCTGGCTTGTATCCAGGTACTGGATGTAAGCAGAGAAGGCAAAG 1258
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1259 AAGAAGTATTCTATGGGCCTACACTCCCTTTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCTCCATAT 1332
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1333 TTTACATGCCCTAACCTTCAAACTCTTCAAGTGCCTCATCACAGGATTGGCACCATCTGAAAAGCCAAGCCATC 1406
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1407 ATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGACTCAGTGCTCCATGCTTCCTTG 1480
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1481 TCTTGCTTTATAGGTCTTATATTCGGATAAATTTAAGCAAAAAATGAACAATTTTCTAAAATACGTTATTGAAA 1554
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1555 ACTCGTCACCCTTCTCAGTGTATGTCAACATTCAATATGTATGACTTTTATTGTGGTATAGCTTAGTGCCAATT 1628
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1629 TAAGGTATATTGTGTTCCATGGGTCTTTAGAGCATTCTTTGTACACTTTTTCTAATCAGCACTGTCTTAAGACA 1702
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1703 ACATAACACTGTTAGTAAGGCAATTTATTGGACACAATGGCATCGATGATCTTAAAAATATATATATTCTGTAC 1776
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1777 TTAATCCCTTTATTATTTAAAGCCGGGCTTGTAATTTTTCTTTTTAAAATTTAACATTATGCAGCCCTGCTCAG 1850
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1851 TAGAGACTCACTCAGCATTATGACATCATAAATTTTTAAATGCCATATTTTATTCAAGGTGATACGAATAATAA 1924
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1925 TAGACATACACTGGAACAGCAGTTGTTGAAATACCCAGATTTTTCACCTTGGTTACTCTGACCTTGGGTCAGAA 1998
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1999 CCTAACTTTACAGTGCTTCAGTTTTCCCACCTTTTAAGGAGGATAATTACTGATTTCCACGTTAATTTAAAAGA 2072
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2073 ACATTATGAGGATTAGGCGAACACTTTGTAATACTTTGCCCAAGAAAAAGAAAAATGTTGTTACTGAAATTATA 2146
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2147 AGGTATTTTATTGTCTTTAGAACCTTGTAATTGAACAGGGAGATTATTTTTGAAGTTTAAAAATTACTAGATAG 2220
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2221 AATTTGGAAACATGTTGTGGAATAAATGATTCTAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAG 2294
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2295 TTTCTCAAAATCTAAACTTGTACAGGTATCTAAACTTGCCTCAAGTAACTCTCAGATGTCTTATTTAAAATCAT 2368
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2369 TTAGTGAAAAATGACATTTAAAGCTAAAAAATAATTTAGTTGTACTAATTATGGTACCATAAAGTGCTTTGACA 2442
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2443 TAAATTTGAACCTAGAATTGGCAGTTCTAATAAAAGTTTTTCCACTTTGTTAAAGGTTATGTCAATCTTGAGTG 2516
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2517 CTTGTGGAATTCTTCACCACCAATACATATTTTATTACTATCTCTTTTAATAATGCATAGGAATTCTTTTTTAG 2590
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2591 ACTAGTTTTTGGGTTTGCTTTGTCTATAACAAAAAATAAATACAACAACTTAATAATCACATTTGAAAACAAAT 2664
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2665 TTAACAAGTATAATGTGAGTTTTTCTTTTTTCCTAACTTCCTCAGGACCTAGGTCACCTTTATTAAAAGGAAGA 2738
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2739 ATTCACTCTTTTTTCCTTGGCAGTTTAATCATTCAGGAATCCCTCTCTTAAAGGAAATTGTTATTTTATTCATG 2812
Query 418 ---------------------------------------------------- 417
Sbjct 2813 TAACCTTTTTTTGTAATCAAAAGTGAATAAAAACGATCTTTTTGTCTTACAG 2864
