Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16095
- Subject:
- NR_157408.2
- Aligned Length:
- 3838
- Identities:
- 104
- Gaps:
- 3733
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGACAGAAGCGTCAATTCCTGGGAGTAGTTCGTTGGTTTTCTTTCCCCTCATCCTTTTGCCTGCTCCCGGCG 74
Query 1 ----------------------ATGAGCTCCCAGAAAGGCAACGTGGCTCGTTCCAGACCTCAGAAGCACCAGA 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGGGGTGGCTTTGATTTCGGCGATGAGCTCCCAGAAAGGCAACGTGGCTCGTTCCAGACCTCAGAAGCACCAGA 148
Query 53 ATACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGCAGACCAAGTGT--------------------- 105
|||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 149 ATACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGCAGACCAAGTCTTTATCTGCAAACTCTAGTCAT 222
Query 106 -------------------------------------------------------------------------- 105
Sbjct 223 GATGTTTGAGTTTGTCTCCCTGTGGAGCAGGGGTCCCCAGCCCCCGACCCCCGCATCGGTCCATGGCCTGTCAG 296
Query 106 -------------------------------------------------------------------------- 105
Sbjct 297 GAACTGGGCCACACAGCAGGAGTTGAACTGCAGAAAATTAATGCAAAACTTCATGATGGAGTATGTCAGCGCTG 370
Query 106 -------------------------------------------------------------------------- 105
Sbjct 371 TAAAGAAGTTCTTGAGTGGCGTGTAAAATACAGCAAATACAAACCATTATCAAAACCTAAAAAGTGATGGAGTC 444
Query 106 -------------------------------------------------------------------------- 105
Sbjct 445 TCCCTCTGTTGCCCAGGCTGGAGTGCAGTGGCAGGATCTTGGCTCACCACAACCTCCGCCTCCCTTGTTCAAGT 518
Query 106 -------------------------------------------------------------------------- 105
Sbjct 519 GATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCGCACACCACCATGCCCAGCTAATCTTTGTATT 592
Query 106 -------------------------------------------------------------------------- 105
Sbjct 593 TTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCCGGTCTCGAACTCCTGACCTCATGATCTGCCTGCCTCA 666
Query 106 -------------------------------------------------------------------------- 105
Sbjct 667 ACCTCCCAAAGTGCTGGAATTACAGGTGTGAGCCATCATGCCTGGCCTAATTTGTATATTTCTAATGACTCATG 740
Query 106 -------------------------------------------------------------------------- 105
Sbjct 741 ATGTTGACTGAGCATCTTTTCTTTTCTTTTCTTTTTTTTTTTCCTTGTTTTTTGAGATGGAGTCTTGCTCTATA 814
Query 106 -------------------------------------------------------------------------- 105
Sbjct 815 GCCCGGGCTGGAGTGCAGTGGCACCATTTCAGCTCAATGCAACCTCTGCCTCCTAGGTTCAAGTGATTCTCCTG 888
Query 106 -------------------------------------------------------------------------- 105
Sbjct 889 CCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACACACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAA 962
Query 106 -------------------------------------------------------------------------- 105
Sbjct 963 ACAGGTTTTCACAATGTTGGCCAGGATGGTCTCCATCTACTGACCTTGTGATCCGCCCCCCTAGGCCTCCCAAA 1036
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1037 GTGCTGGGCTTACAGGCATGAGCCACTGCACCCAGCCGACTGAACATCTTTTCATGTGTTTATTAGCCAATCCT 1110
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1111 ATATCTTCACTGGTGAAATGTCTATTCAGATGTGTTGCCCATTTTAAAAATTGGGTTGTTTTCTTACCATTGAG 1184
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1185 TTATGAGTCTTTTATATATATTCTAGATACAAGTCCTTTATCAGATATAATTTGGAAATATTTTCTCGCTGTCT 1258
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1259 GTAATGTGTTATACATCAATTTTGAGATATCCTTCACATTAAGAAACTAACGGTGTGGATAATAATCCTGGTAT 1332
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1333 TGACAGAGGTTTGGACTCCTGAAGCCTGAAAGTCTATCTGCTGCCACGCCTGGGCACATACTGCATCATTTACA 1406
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1407 AAACTGTAGAGCACCTGTTGTGTGTGCAGTTGTGATTTCTTATAGATTTTTAGAATTGGAAGGCATGTAAAGAA 1480
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1481 CACGTAATCTGGTACATTGCTTCAGTAGGTAAGTCAGTATGAACTTCTAAGAATTTTTGTTTTCTTCTGTATTG 1554
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1555 GGTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGTAAGGGAAGTGGCATCCCCTGAGATAGTGACTGAAATG 1628
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1629 GCTTTCATCATCTTTAAGTCAAAGTGAGATGCCAGTAATAGGATATATGTATGTATGTACTTGTGTCTCTGTAT 1702
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1703 GTATGTAAATAAACAAACATGCTGGAAGGAGGAGGTGATTCAATCAGGGACTTTGTGAAAGAAAAAAAGAATAA 1776
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1777 CTGGACCTTCCTTTAATGATGAAAACTGTTTATACAGCAAACCATCAAAGCCAAAATGTGAATTTTGGTATTAG 1850
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1851 CCCGATTTTTCCTAAGAAACTGTTGATGTAACCACTGTAGTTGCAGAGATCGTTTTGGTATATTCTAGACCCTC 1924
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1925 TTTGTTTTGTTCTGTTTGGGGTTTCTTCCCCCTCAAGTTGCTCTTGTCCACCACTAGACTGGCTGCCTTTTATT 1998
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1999 CCATAGCAGACAGTCCTTAAGTCTTTGCATATGTCCTTATTCAAAAATTAATCTTCATCAGTTTTTTTCTGCAG 2072
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2073 AAAACAGTTTTTTAAATATCTTACATGAGAATGCTCTGCACCTGCAATCTCTGGTTGATGCAGTTTCCTTTCTC 2146
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2147 TCTTCTCTGTTCCCATTGGTAGAATAAATCTGCTCCTTCTTAAATCCTGAGCTGAAAATGTCCACACTTCCCAG 2220
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2221 AAGTGTACTTTAGAATCACCTGTAACATGTATTTAAAATACAGATTCCCCAGCTCCACGGGCAAAGCTCTCCTG 2294
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2295 CCATGTGACACCCTGATACAGTTCAGGGAGCCACTAAGGCAGGCCAAAATGGCTCAGCAGGCAAAGGTCCAAGC 2368
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2369 TGCCAGGGTAGTGTGTCATTACAGCATGCTTAGCATAGCTAGGAGGACAGGCTCACACCCAGCCCCACAGCTGT 2442
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2443 TGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGGCCACAACTGTTGGAGACAAGCCAGCCAT 2516
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2517 ATTTGGGAAAATCTTATTGTAAGGGGCAAGTGTGAGTGAGATTTAGGAGTCATGGGAAAATACACCAACACAGT 2590
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2591 AAATCTTGTGTTATAGGAGAGATGTGGAAGAAAGAGATAAACTACTGGCCAGGGTGTCTCCTGACTGGGTGACT 2664
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2665 TGCCACCACATGGGCCAGGCAGGTTGCGGCAGCTCTGCCTTTGGGAGGTGGCTGGAGGAGGGGAGGAGAGAGAG 2738
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2739 GCATGATGAAGACAGATGCACCCTTTCCTGAGCAGGGGTTAACATTCAGGGTGCCGAAAGGAATTCCACAGCCT 2812
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2813 GTTTCCCATCTCTCTTGTCCTCATCAAGTACTGGTCCTCGTGTATGTGTTCTGCTTCCGCTTTCTCAGGATGTT 2886
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2887 TACGTTTTTGCAAATACGTTTATGGAAAAGAGTTACCTCACCCACCTCTCCAAACATCTATTTGTTTTACATTT 2960
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2961 TTATTGCGGGGGAGTGATCTCTTTACATAGCTTCAAATGGCATAACATTCAGCAGTATCCAAGCTTAGATATAT 3034
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3035 CTGATGAGAGGAAAGTAATTGTGAGGCCTTTGTTCTAGTTACAACTTTGTCACTATCTGACTCCATGACTCCAG 3108
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3109 CAAATTGCTTCAACTGTCTGGCCTGCAGTTTTTTTCTTGCGTTAAATAACAGACTTAGTCTAGATCGGTGGTTC 3182
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3183 TTATCATGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAACTTGTTAGAAATGCAAATTCTTGGGCTC 3256
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3257 TGCCCTAGACCTACTGAAACATACTCTGTGGGCGGGGCCCAGCAATCTGTGTTTGAAACGCGATTCTGATTATT 3330
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3331 TGACAAAAGTTTGCAAACCACTGGTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAAAATCATCTGGGCA 3404
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3405 ACTTTTATAACCTACCAATCCTGGCCTCTTCCTCCAAAGATTCTGACTTAAATGGTTTCAGATGGGGACCATTG 3478
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3479 TTATGCGGTTATAGCCGACGCCTAGGTGCTACCTGAGGTCTTCAAAGCTAAAGGTCAGTGTTTCCCAGCCGTAA 3552
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3553 ATGCATACCTCTAGACCTGGCCTTCTCAAGCCACTAGGTGTTGCTATAATAGAGAAGAAAAGGCATTTTCAGAA 3626
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3627 CCGTCTTTGGATATGGATGAGGAGGAGGAAAATGTATTTCTTAGCTTCTGATAAGAGATTATTTTGTTATTTTA 3700
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3701 ATCTGAGTGCAATTTGCTAAATATTCATTTGCAACTTGTTAAATTTATTCAAAGAAATTAAATGCCCATAAGTG 3774
Query 106 ---------------------------------------------------------------- 105
Sbjct 3775 ACAGAAAGAATAAAGAATTGTGATATATATTTACAATAAAATACTCTTTAGCAATAAAAAGAAA 3838
