Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16095
- Subject:
- NR_157409.2
- Aligned Length:
- 3925
- Identities:
- 104
- Gaps:
- 3820
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGACAGAAGCGTCAATTCCTGGGAGTAGTTCGTTGGTTTTCTTTCCCCTCATCCTTTTGCCTGCTCCCGGCG 74
Query 1 ----------------------ATGAGCTCCCAGAAAGGCAACGTGGCTCGTTCCAGACCTCAGAAGCACCAGA 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGGGGTGGCTTTGATTTCGGCGATGAGCTCCCAGAAAGGCAACGTGGCTCGTTCCAGACCTCAGAAGCACCAGA 148
Query 53 ATACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGCAGACCAAG--------TGT------------- 105
|||||||||||||||||||||||||||||||||||||||||||||||||| ||.
Sbjct 149 ATACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGCAGACCAAGAAAATTAATGCAAAACTTCATGAT 222
Query 106 -------------------------------------------------------------------------- 105
Sbjct 223 GGAGTATGTCAGCGCTGTAAAGAAGTTCTTGAGTGGCGTGTAAAATACAGCAAATACAAACCATTATCAAAACC 296
Query 106 -------------------------------------------------------------------------- 105
Sbjct 297 TAAAAAGTGTGTTAAATGTTTACAAAAGACAGTGAAGGATTCTTATCACATAATGTGCAGGCCATGTGCCTGTG 370
Query 106 -------------------------------------------------------------------------- 105
Sbjct 371 AACTTGAAGTTTGCGCAAAATGTGGAAAGAAAGAAGACATTGTTATTCCGAGTTGGAAGCTTTAGAAGGAGTTT 444
Query 106 -------------------------------------------------------------------------- 105
Sbjct 445 CAACTCAGGAGTCACTGTCCCTTGAGTGAGACCCCACCTGTATGGAGGAGCTGGTGATTCTATATCTGCACTTA 518
Query 106 -------------------------------------------------------------------------- 105
Sbjct 519 ACATTATGGAGTCTCCCTCTGTTGCCCAGGCTGGAGTGCAGTGGCAGGATCTTGGCTCACCACAACCTCCGCCT 592
Query 106 -------------------------------------------------------------------------- 105
Sbjct 593 CCCTTGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCGCACACCACCATGCCCAGC 666
Query 106 -------------------------------------------------------------------------- 105
Sbjct 667 TAATCTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCCGGTCTCGAACTCCTGACCTCATGA 740
Query 106 -------------------------------------------------------------------------- 105
Sbjct 741 TCTGCCTGCCTCAACCTCCCAAAGTGCTGGAATTACAGGTGTGAGCCATCATGCCTGGCCTAATTTGTATATTT 814
Query 106 -------------------------------------------------------------------------- 105
Sbjct 815 CTAATGACTCATGATGTTGACTGAGCATCTTTTCTTTTCTTTTCTTTTTTTTTTTCCTTGTTTTTTGAGATGGA 888
Query 106 -------------------------------------------------------------------------- 105
Sbjct 889 GTCTTGCTCTATAGCCCGGGCTGGAGTGCAGTGGCACCATTTCAGCTCAATGCAACCTCTGCCTCCTAGGTTCA 962
Query 106 -------------------------------------------------------------------------- 105
Sbjct 963 AGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACACACCACCATGCCCAGCTAATTTTTGT 1036
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1037 ATTTTTAGTAGAAACAGGTTTTCACAATGTTGGCCAGGATGGTCTCCATCTACTGACCTTGTGATCCGCCCCCC 1110
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1111 TAGGCCTCCCAAAGTGCTGGGCTTACAGGCATGAGCCACTGCACCCAGCCGACTGAACATCTTTTCATGTGTTT 1184
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1185 ATTAGCCAATCCTATATCTTCACTGGTGAAATGTCTATTCAGATGTGTTGCCCATTTTAAAAATTGGGTTGTTT 1258
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1259 TCTTACCATTGAGTTATGAGTCTTTTATATATATTCTAGATACAAGTCCTTTATCAGATATAATTTGGAAATAT 1332
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1333 TTTCTCGCTGTCTGTAATGTGTTATACATCAATTTTGAGATATCCTTCACATTAAGAAACTAACGGTGTGGATA 1406
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1407 ATAATCCTGGTATTGACAGAGGTTTGGACTCCTGAAGCCTGAAAGTCTATCTGCTGCCACGCCTGGGCACATAC 1480
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1481 TGCATCATTTACAAAACTGTAGAGCACCTGTTGTGTGTGCAGTTGTGATTTCTTATAGATTTTTAGAATTGGAA 1554
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1555 GGCATGTAAAGAACACGTAATCTGGTACATTGCTTCAGTAGGTAAGTCAGTATGAACTTCTAAGAATTTTTGTT 1628
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1629 TTCTTCTGTATTGGGTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGTAAGGGAAGTGGCATCCCCTGAGAT 1702
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1703 AGTGACTGAAATGGCTTTCATCATCTTTAAGTCAAAGTGAGATGCCAGTAATAGGATATATGTATGTATGTACT 1776
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1777 TGTGTCTCTGTATGTATGTAAATAAACAAACATGCTGGAAGGAGGAGGTGATTCAATCAGGGACTTTGTGAAAG 1850
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1851 AAAAAAAGAATAACTGGACCTTCCTTTAATGATGAAAACTGTTTATACAGCAAACCATCAAAGCCAAAATGTGA 1924
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1925 ATTTTGGTATTAGCCCGATTTTTCCTAAGAAACTGTTGATGTAACCACTGTAGTTGCAGAGATCGTTTTGGTAT 1998
Query 106 -------------------------------------------------------------------------- 105
Sbjct 1999 ATTCTAGACCCTCTTTGTTTTGTTCTGTTTGGGGTTTCTTCCCCCTCAAGTTGCTCTTGTCCACCACTAGACTG 2072
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2073 GCTGCCTTTTATTCCATAGCAGACAGTCCTTAAGTCTTTGCATATGTCCTTATTCAAAAATTAATCTTCATCAG 2146
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2147 TTTTTTTCTGCAGAAAACAGTTTTTTAAATATCTTACATGAGAATGCTCTGCACCTGCAATCTCTGGTTGATGC 2220
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2221 AGTTTCCTTTCTCTCTTCTCTGTTCCCATTGGTAGAATAAATCTGCTCCTTCTTAAATCCTGAGCTGAAAATGT 2294
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2295 CCACACTTCCCAGAAGTGTACTTTAGAATCACCTGTAACATGTATTTAAAATACAGATTCCCCAGCTCCACGGG 2368
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2369 CAAAGCTCTCCTGCCATGTGACACCCTGATACAGTTCAGGGAGCCACTAAGGCAGGCCAAAATGGCTCAGCAGG 2442
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2443 CAAAGGTCCAAGCTGCCAGGGTAGTGTGTCATTACAGCATGCTTAGCATAGCTAGGAGGACAGGCTCACACCCA 2516
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2517 GCCCCACAGCTGTTGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGGCCACAACTGTTGGAG 2590
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2591 ACAAGCCAGCCATATTTGGGAAAATCTTATTGTAAGGGGCAAGTGTGAGTGAGATTTAGGAGTCATGGGAAAAT 2664
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2665 ACACCAACACAGTAAATCTTGTGTTATAGGAGAGATGTGGAAGAAAGAGATAAACTACTGGCCAGGGTGTCTCC 2738
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2739 TGACTGGGTGACTTGCCACCACATGGGCCAGGCAGGTTGCGGCAGCTCTGCCTTTGGGAGGTGGCTGGAGGAGG 2812
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2813 GGAGGAGAGAGAGGCATGATGAAGACAGATGCACCCTTTCCTGAGCAGGGGTTAACATTCAGGGTGCCGAAAGG 2886
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2887 AATTCCACAGCCTGTTTCCCATCTCTCTTGTCCTCATCAAGTACTGGTCCTCGTGTATGTGTTCTGCTTCCGCT 2960
Query 106 -------------------------------------------------------------------------- 105
Sbjct 2961 TTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGTTACCTCACCCACCTCTCCAAACATCTAT 3034
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3035 TTGTTTTACATTTTTATTGCGGGGGAGTGATCTCTTTACATAGCTTCAAATGGCATAACATTCAGCAGTATCCA 3108
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3109 AGCTTAGATATATCTGATGAGAGGAAAGTAATTGTGAGGCCTTTGTTCTAGTTACAACTTTGTCACTATCTGAC 3182
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3183 TCCATGACTCCAGCAAATTGCTTCAACTGTCTGGCCTGCAGTTTTTTTCTTGCGTTAAATAACAGACTTAGTCT 3256
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3257 AGATCGGTGGTTCTTATCATGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAACTTGTTAGAAATGCA 3330
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3331 AATTCTTGGGCTCTGCCCTAGACCTACTGAAACATACTCTGTGGGCGGGGCCCAGCAATCTGTGTTTGAAACGC 3404
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3405 GATTCTGATTATTTGACAAAAGTTTGCAAACCACTGGTCTAGATAAGTAGCTCTTAGCCTTGGCTGCACATTAA 3478
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3479 AATCATCTGGGCAACTTTTATAACCTACCAATCCTGGCCTCTTCCTCCAAAGATTCTGACTTAAATGGTTTCAG 3552
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3553 ATGGGGACCATTGTTATGCGGTTATAGCCGACGCCTAGGTGCTACCTGAGGTCTTCAAAGCTAAAGGTCAGTGT 3626
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3627 TTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCACTAGGTGTTGCTATAATAGAGAAGAAAA 3700
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3701 GGCATTTTCAGAACCGTCTTTGGATATGGATGAGGAGGAGGAAAATGTATTTCTTAGCTTCTGATAAGAGATTA 3774
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3775 TTTTGTTATTTTAATCTGAGTGCAATTTGCTAAATATTCATTTGCAACTTGTTAAATTTATTCAAAGAAATTAA 3848
Query 106 -------------------------------------------------------------------------- 105
Sbjct 3849 ATGCCCATAAGTGACAGAAAGAATAAAGAATTGTGATATATATTTACAATAAAATACTCTTTAGCAATAAAAAG 3922
Query 106 --- 105
Sbjct 3923 AAA 3925
