Nucleotide Global Alignment

Description

Query:
ccsbBroad304_16137
Subject:
XM_017014588.1
Aligned Length:
1691
Identities:
586
Gaps:
1075

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCTGCAAACTCGCACTGCCAAGAGGGAAACCAAAGGGCAGTTTCTCATTGACCACATCTGCAACTACTACAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTGCTGGAGAAGGACTACTTTGGCATTCGCTATGTGGACCCAGAGAAGCAAAGGCACTGGCTTGAACCTAACA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGTCCATCTTCAAGCAAATGAAAACTCATCCACCATACACCATGTGCTTTAGAGTGAAATTCTACCCACATGAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCTTGAAGATTAAAGAAGAGCTCACAAGATACCTTTTATACCTTCAGATTAAAAGGGACATTTTTCATGGCCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCTGCTGTGCTCCTTTTCTGATGCTGCCTACCTGGGTGCCTGTATTGTTCAAGCTGAGCTTGGTGATTACGATC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTGATGAGCATCCTGAGAATTACATCAGTGAGTTTGAGATTTTCCCCAAGCAGTCACAGAAGCTGGAAAGAAAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATAGTGGAAATTCATAAAAATGAACTCAGGGGGCAGAGCCCACCAGTTGCTGAATTTAACTTGCTCCTGAAAGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCACACTTTGGAAACCTACGGGGTGGATCCTCACCCATGCAAGGATTCAACAGGCACAACAACATTTTTAGGAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCACAGCTGCAGGCTTTGTGGTCTTTCAGGGAAATAAGAGAATCCATTTGATAAAATGGCCAGATGTCTGCAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTGAAGTTTGAAGGGAAGACATTTTATGTGATTGGCACCCAGAAGGAGAAAAAAGCCATGTTGGCATTCCATAC  740

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    ||
Sbjct  741  TTCAACACCAGCTGCCTGCAAACATCTTTGGAAGTGTGGAGTGGAAAACCAGGCCTTTTATAAGTATGCAAAAT  814

Query    3  GCAGGCCGA-GGAGAC-----CAAG-------------------GG-----GATT-----------GGAATAAC  35
            .|||.|.|| ..||||     ||||                   ||     ||||           ||||    
Sbjct  815  CCAGTCAGATCAAGACTGTATCAAGCAGCAAGATATTTTTTAAAGGAAGTAGATTTCGATATAGTGGGAA----  884

Query   36  CAGTATGGCAAA-ATGCTTGGT------------CAAGATCCAGACTCGACGAAGCCTCC--AATTGCACATGG  94
             ||| ||.|||| |.|  ||||            |||||||||     ||.|.|||||||  |..||||||..|
Sbjct  885  -AGT-TGCCAAAGAGG--TGGTGGAGGCCAGTTCCAAGATCCA-----GAGGGAGCCTCCTGAGGTGCACAGAG  949

Query   95  TGAA---------------------CCACTGC-------AACAG--------TAATGTGTTTGTTCGTCTGCTG  132
            ..||                     |||||.|       |||||        |||..||   |..|..||||  
Sbjct  950  CCAACATTACTCAGAGCCGCAGTTCCCACTCCTTGAACAAACAGCTCATCATTAACATG---GAACCCCTGC--  1018

Query  133  AGACTCGGC-----TCCAAGGTCACAGCTCGTAA-------CACT-------------GGTGTTCCATTGCCTA  181
            ||.|.|.||     |||     |.||||..|.||       .|||             ||||||||||||||||
Sbjct 1019  AGCCCCTGCTTCCTTCC-----CCCAGCGAGCAAGAAGAAGAACTTCCTCTGGGTGAGGGTGTTCCATTGCCTA  1087

Query  182  AAGAGGAGAACATTTCTGCTCCCTTGATCTCCAGCTCCCCAGTGAAGGCAGCCCGGGAGTATGAAGATCCCCCT  255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088  AAGAGGAGAACATTTCTGCTCCCTTGATCTCCAGCTCCCCAGTGAAGGCAGCCCGGGAGTATGAAGATCCCCCT  1161

Query  256  AGTGAAGAGGAAGATAAAATAAAAGAAGAACCTTTAACCATCTCTGAACTAGTGTACAACCCAAGTGCCAGCCT  329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162  AGTGAAGAGGAAGATAAAATAAAAGAAGAACCTTTAACCATCTCTGAACTAGTGTACAACCCAAGTGCCAGCCT  1235

Query  330  GCTCCCCACCCCTGTGGATGACGATGAGATTGACATGCTCTTTGACTGTCCTTCTAGGCTTGAGTTGGAAAGAG  403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1236  GCTCCCCACCCCTGTGGATGACGATGAGATTGACATGCTCTTTGACTGTCCTTCTAGGCTTGAGTTGGAAAGAG  1309

Query  404  AAGACACAGATTCATTTGAGGATCTGGAAGCAGATGAAAACGCCTTTTTGATTGCTGAAGAAGAGGAGCTGAAG  477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1310  AAGACACAGATTCATTTGAGGATCTGGAAGCAGATGAAAACGCCTTTTTGATTGCTGAAGAAGAGGAGCTGAAG  1383

Query  478  GAGGCTCGCCGTGCTTTGTCGTGGAGCTATGACATTCTGACTGGCCATATTCGGGTGAACCCACTGGTCAAGAG  551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1384  GAGGCTCGCCGTGCTTTGTCGTGGAGCTATGACATTCTGACTGGCCATATTCGGGTGAACCCACTGGTCAAGAG  1457

Query  552  TTTTTCCAGGCTCCTTGTGGTGGGCCTGGGACTGCTGCTCTTTGTATTTCCCCTGCTCCTCCTCCTTTTGGAGT  625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1458  TTTTTCCAGGCTCCTTGTGGTGGGCCTGGGACTGCTGCTCTTTGTATTTCCCCTGCTCCTCCTCCTTTTGGAGT  1531

Query  626  CAG---------TCTCC-----ATG----------CAG------------------------------------  639
            |||         |||||     |||          |||                                    
Sbjct 1532  CAGGTATTGATCTCTCCTTCTTATGCGAAATCCGCCAGACACCAGAGTTTGAGCAGTTTCACTATGAATACTAC  1605

Query  640  ---------------------------------------------------------------  639
                                                                           
Sbjct 1606  TGTCCCCTCAAGGAGTGGGTGGCTGGGAAAGTCCACCTCATCCTCTACATGCTGGGTTGCTCA  1668

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