Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16137
- Subject:
- XM_017014588.1
- Aligned Length:
- 1691
- Identities:
- 586
- Gaps:
- 1075
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGCAAACTCGCACTGCCAAGAGGGAAACCAAAGGGCAGTTTCTCATTGACCACATCTGCAACTACTACAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGCTGGAGAAGGACTACTTTGGCATTCGCTATGTGGACCCAGAGAAGCAAAGGCACTGGCTTGAACCTAACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGTCCATCTTCAAGCAAATGAAAACTCATCCACCATACACCATGTGCTTTAGAGTGAAATTCTACCCACATGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCTTGAAGATTAAAGAAGAGCTCACAAGATACCTTTTATACCTTCAGATTAAAAGGGACATTTTTCATGGCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTGCTGTGCTCCTTTTCTGATGCTGCCTACCTGGGTGCCTGTATTGTTCAAGCTGAGCTTGGTGATTACGATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGATGAGCATCCTGAGAATTACATCAGTGAGTTTGAGATTTTCCCCAAGCAGTCACAGAAGCTGGAAAGAAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATAGTGGAAATTCATAAAAATGAACTCAGGGGGCAGAGCCCACCAGTTGCTGAATTTAACTTGCTCCTGAAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCACACTTTGGAAACCTACGGGGTGGATCCTCACCCATGCAAGGATTCAACAGGCACAACAACATTTTTAGGAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCACAGCTGCAGGCTTTGTGGTCTTTCAGGGAAATAAGAGAATCCATTTGATAAAATGGCCAGATGTCTGCAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGAAGTTTGAAGGGAAGACATTTTATGTGATTGGCACCCAGAAGGAGAAAAAAGCCATGTTGGCATTCCATAC 740
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 741 TTCAACACCAGCTGCCTGCAAACATCTTTGGAAGTGTGGAGTGGAAAACCAGGCCTTTTATAAGTATGCAAAAT 814
Query 3 GCAGGCCGA-GGAGAC-----CAAG-------------------GG-----GATT-----------GGAATAAC 35
.|||.|.|| ..|||| |||| || |||| ||||
Sbjct 815 CCAGTCAGATCAAGACTGTATCAAGCAGCAAGATATTTTTTAAAGGAAGTAGATTTCGATATAGTGGGAA---- 884
Query 36 CAGTATGGCAAA-ATGCTTGGT------------CAAGATCCAGACTCGACGAAGCCTCC--AATTGCACATGG 94
||| ||.|||| |.| |||| ||||||||| ||.|.||||||| |..||||||..|
Sbjct 885 -AGT-TGCCAAAGAGG--TGGTGGAGGCCAGTTCCAAGATCCA-----GAGGGAGCCTCCTGAGGTGCACAGAG 949
Query 95 TGAA---------------------CCACTGC-------AACAG--------TAATGTGTTTGTTCGTCTGCTG 132
..|| |||||.| ||||| |||..|| |..|..||||
Sbjct 950 CCAACATTACTCAGAGCCGCAGTTCCCACTCCTTGAACAAACAGCTCATCATTAACATG---GAACCCCTGC-- 1018
Query 133 AGACTCGGC-----TCCAAGGTCACAGCTCGTAA-------CACT-------------GGTGTTCCATTGCCTA 181
||.|.|.|| ||| |.||||..|.|| .||| ||||||||||||||||
Sbjct 1019 AGCCCCTGCTTCCTTCC-----CCCAGCGAGCAAGAAGAAGAACTTCCTCTGGGTGAGGGTGTTCCATTGCCTA 1087
Query 182 AAGAGGAGAACATTTCTGCTCCCTTGATCTCCAGCTCCCCAGTGAAGGCAGCCCGGGAGTATGAAGATCCCCCT 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088 AAGAGGAGAACATTTCTGCTCCCTTGATCTCCAGCTCCCCAGTGAAGGCAGCCCGGGAGTATGAAGATCCCCCT 1161
Query 256 AGTGAAGAGGAAGATAAAATAAAAGAAGAACCTTTAACCATCTCTGAACTAGTGTACAACCCAAGTGCCAGCCT 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162 AGTGAAGAGGAAGATAAAATAAAAGAAGAACCTTTAACCATCTCTGAACTAGTGTACAACCCAAGTGCCAGCCT 1235
Query 330 GCTCCCCACCCCTGTGGATGACGATGAGATTGACATGCTCTTTGACTGTCCTTCTAGGCTTGAGTTGGAAAGAG 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1236 GCTCCCCACCCCTGTGGATGACGATGAGATTGACATGCTCTTTGACTGTCCTTCTAGGCTTGAGTTGGAAAGAG 1309
Query 404 AAGACACAGATTCATTTGAGGATCTGGAAGCAGATGAAAACGCCTTTTTGATTGCTGAAGAAGAGGAGCTGAAG 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1310 AAGACACAGATTCATTTGAGGATCTGGAAGCAGATGAAAACGCCTTTTTGATTGCTGAAGAAGAGGAGCTGAAG 1383
Query 478 GAGGCTCGCCGTGCTTTGTCGTGGAGCTATGACATTCTGACTGGCCATATTCGGGTGAACCCACTGGTCAAGAG 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1384 GAGGCTCGCCGTGCTTTGTCGTGGAGCTATGACATTCTGACTGGCCATATTCGGGTGAACCCACTGGTCAAGAG 1457
Query 552 TTTTTCCAGGCTCCTTGTGGTGGGCCTGGGACTGCTGCTCTTTGTATTTCCCCTGCTCCTCCTCCTTTTGGAGT 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1458 TTTTTCCAGGCTCCTTGTGGTGGGCCTGGGACTGCTGCTCTTTGTATTTCCCCTGCTCCTCCTCCTTTTGGAGT 1531
Query 626 CAG---------TCTCC-----ATG----------CAG------------------------------------ 639
||| ||||| ||| |||
Sbjct 1532 CAGGTATTGATCTCTCCTTCTTATGCGAAATCCGCCAGACACCAGAGTTTGAGCAGTTTCACTATGAATACTAC 1605
Query 640 --------------------------------------------------------------- 639
Sbjct 1606 TGTCCCCTCAAGGAGTGGGTGGCTGGGAAAGTCCACCTCATCCTCTACATGCTGGGTTGCTCA 1668
