Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16141
- Subject:
- NM_001168347.3
- Aligned Length:
- 1411
- Identities:
- 335
- Gaps:
- 1061
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGCTGTATGCTGCAGCTGCAGGCGTGTTGGCCGGCGTGGAGAGCCGCCAGGGCTCTATCAAGGGGTTGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTACTCCAGCAACTTCCAGAACGTGAAGCAGCTGTACGCGCTGGTGTGCGAAACGCAGCGCTACTCCGCCGTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGATGCTGTGATCGCCAGCGCCGGCCTCCTCCGTGCGGAGAAGAAGCTGCGGCCGCACCTGGCCAAGGTGCTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGTATGAGTTGTTGTTGGGAAAGGGCTTTCGAGGGGGTGGGGGCCGATGGAAGGCTCTGTTGGGCCGGCACCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCGAGGCTCAAGGCTGAGTTGGCTCGGCTCAAGGTTCATCGGGGTGTGAGCCGGAATGAGGACCTGTTGGAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGATCCAGGCCTGGTCCAGCCTCCCAGCTGCCTCGATTTGTGCGTGTGAACACTCTCAAGACCTGCTCCGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATGTAGTTGATTATTTCAAGAGACAAGGTTTCTCCTATCAGGGTCGGGCTTCCAGCCTCGATGACTTACGAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTCAAGGGGAAGCATTTTCTCCTGGACCCCTTGATGCCGGAGCTGCTGGTGTTTCCCGCCCAGACAGATCTGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGAACACCCACTGTACCGGGCCGGACACCTCATTCTGCAGGACAGGGCCAGCTGTCTCCCAGCCATGCTGCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACCCCCCGCCAGGCTCCCATGTCATCGATGCCTGTGCCGCCCCAGGCAATAAGACCAGTCACTTGGCTGCTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTGAAGAACCAAGGGAAGATCTTTGCCTTTGACCTGGATGCCAAGCGGCTGGCATCCATGGCCACGCTGCTGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCCGGGCTGGCGTCTCTTGCTGTGAACTGGCTGAGGAGGACTTCCTGGCGGTCTCCCCCTCGGATCCACGCTAC 888
Query 1 ------------------------------------------------ATGCCGAGCAGACAGCTGGAGGAGCC 26
||||||||||||||||||||||||||
Sbjct 889 CATGAGGTCCACTACATCCTGCTGGATCCTTCCTGCAGTGGCTCGGGTATGCCGAGCAGACAGCTGGAGGAGCC 962
Query 27 CGGGGCAGGGACACCTAGCCCGGTGCGTCTGCATGCCCTGGCAGGGTTCCAGCAGCGAGCCCTGTGCCACGCGC 100
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 963 CGGGGCAGGCACACCTAGCCCGGTGCGTCTGCATGCCCTGGCAGGGTTCCAGCAGCGAGCCCTGTGCCACGCAC 1036
Query 101 TCACTTTCCCTTCCCTGCAGCGGCTCGTCTACTCCATGTGCTCCCTCTGCCAGGAGGAGAATGAAGACATGGTA 174
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||.||||.
Sbjct 1037 TCACTTTCCCTTCCCTGCAGCGGCTCGTCTACTCCACGTGCTCCCTCTGCCAGGAGGAGAATGAAGACGTGGTG 1110
Query 175 CAAGATGCGCTGCAGCAGAACCCGGGCGCCTTCAGGCTAGCTCCCGCCCTGCCTGCCCGGCCCCACCGAGGCCT 248
|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1111 CGAGATGCGCTGCAGCAGAACCCGGGCGCCTTCAGGCTAGCTCCCGCCCTGCCTGCCTGGCCCCACCGAGGCCT 1184
Query 249 GAGCACGTTCCCGGGTGCCGAGCACTGCCTCCGGGCTTCCCCCAAGACCACGCTTAGCGGTGGCTTCTTCGTTG 322
||||||||||||||||||||||||||||||||||||.|||||..|||||||.||.|||.|||||||||||||||
Sbjct 1185 GAGCACGTTCCCGGGTGCCGAGCACTGCCTCCGGGCCTCCCCTGAGACCACACTCAGCAGTGGCTTCTTCGTTG 1258
Query 323 CTGTAATTGAACGGGTCGAGATGCCGACG--------------------------------------------- 351
||||||||||||||||||||.|||| |.|
Sbjct 1259 CTGTAATTGAACGGGTCGAGGTGCC-AAGCCTCACAGGCCAAAGCATCAGCACCAGAACGCACACCCAGCCCAG 1331
Query 352 -------------------------------------------------------------------------- 351
Sbjct 1332 CCCCAAAGAGAAAGAAGAGACAGCAAAGAGCCGCAGCCGGTGCTTGCACACCGCCTTGCACATAGCAGAGGCTC 1405
Query 352 ----- 351
Sbjct 1406 CGGGC 1410
