Nucleotide Global Alignment

Description

• Query: ccsbBroad304_16160
• Subject: XM_011522585.1
• Aligned Length: 946
• Identities: 524
• Gaps: 398

Alignment

Query   1  ATGTTTTGTTGCTTAGGATATGAATGGCTGAGCGGAGGCTGTAAAAC----------------CTGGCACTCTG  58
                                  |||...|.||||.||||     ||                .||||.| |||
Sbjct   1  -----------------------ATGCGGGTGCGGTGGCT-----ACTCTTTTGGCTCCTCTTTTGGCTC-CTG  45

Query  59  CT-------------------------TGGGTTATCAATACTCTGGCTGACCATCGTCATCGTGGGACTGACTT  107
           ||                         ||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct  46  CTGGGATTTATCAGCCATCAGTCCACCTGTGTTATCAATACTCTGGCTGACCATCGTCATCGTGGGACTGACTT  119

Query 108  TGGTGGAAGTCCTTGGTTACTTATCATTACTGTGTTTCTGAGAAGTTATAAATTTGCCATCTCCCTCTGCACAA  181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120  TGGTGGAAGTCCTTGGTTACTTATCATTACTGTGTTTCTGAGAAGTTATAAATTTGCCATCTCCCTCTGCACAA  193

Query 182  GTTACCTTTGTGTGTCTTTCCTGAAGACTATCTTCCCGTCTCAAAATGGACATGATGGATCCACGGATGTACAG  255
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194  GTTACCTTTGTGTGTCTTTCCTGAAGACTATCTTCCCGTCTCAAAATGGACATGATGGATCCACGGATGTACAG  267

Query 256  CAGAGAGCCAGGAGGTCCAACTGCCGTAGACAGGAAGGAATTAAAATTGTCCTGGAAGACATCTTTACTTTATG  329
           |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 268  CAGAGAGCCAGGAGGTCCAACCGCCGTAGACAGGAAGGAATTAAAATTGTCCTGGAAGACATCTTTACTTTATG  341

Query 330  GAGACAGGTGGAAACCAAAGTTCGAGCTAAAATCCGTAAGATGAAGGTGACAACAAAAGTCAACCGTCATGACA  403
           ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 342  GAGACAGGTGGAAACCAAAGTTCGAGCTAAAATCTGTAAGATGAAGGTGACAACAAAAGTCAACCGTCATGACA  415

Query 404  AAATCAATGGAAAGAGGAAGACCGCCAAAGAACATCTGAGGAAACTAAGCATGAAAGAACGTGAGCACGGAGAA  477
           ||||||||||||||||||||||||||||||||||                                        
Sbjct 416  AAATCAATGGAAAGAGGAAGACCGCCAAAGAACA----------------------------------------  449

Query 478  AAGGAGAGGCAGGTGTCAGAGGCAGAGGAAAATGGGAAATTGGATATGAAAGAAATACACACCTACATGGAAAT  551
                                                                               ||||||
Sbjct 450  --------------------------------------------------------------------GGAAAT  455

Query 552  GTTTCAACGTGCGCAAGCGTTGCGGCGGCGGGCAGAGGACTACTACAGATGCAAAATCACCCCTTCTGCAAGAA  625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 456  GTTTCAACGTGCGCAAGCGTTGCGGCGGCGGGCAGAGGACTACTACAGATGCAAAATCACCCCTTCTGCAAGAA  529

Query 626  AGCCTCTTTGCAACCGGTGCACTTACAATTTG---GTATTACCTGGGAGTGAAAAGAAATATTACAGCCATGCC  696
           ||||||||||||||||| |.|     |.||||   ||.||.|.||....||    ||.|||.| |.||||.|.|
Sbjct 530  AGCCTCTTTGCAACCGG-GTA-----AGTTTGCTTGTTTTCCTTGCTTTTG----GACATAGT-CTGCCAGGTC  592

Query 697  --------------------------------------------------------------------------  696
                                                                                     
Sbjct 593  AGGACATGGATACATTTTTCTCCCTACGGCTCTGTGCTCAAGCCCTGCAGAGGGAGATGGCAGAGAGGAAGGCT  666

Query 697  --------------------------------------------------------------------------  696
                                                                                     
Sbjct 667  GCCTACAAGCATCACAGTCCCATCCCTGTTGGTAACCGTGTTGCGCAAAAACACCTTCATCCCCACCCAGTGGG  740

Query 697  ----------------------------------------------------------  696
                                                                     
Sbjct 741  GCCCCCATCTAATATTCTAAGTGTCAGAGGTTCCGTATTTGTAATAGCAAATGGGCCC  798