Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16175
- Subject:
- XR_001744857.1
- Aligned Length:
- 4775
- Identities:
- 2297
- Gaps:
- 2477
Alignment
Query 1 --------ATGGCGGCGCTGAGCGGTGGCGGTGGTGGCGGCGCGGAGCCGGGCCAGGCTCTGTTCAACGGGGAC 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTTATAAGATGGCGGCGCTGAGCGGTGGCGGTGGTGGCGGCGCGGAGCCGGGCCAGGCTCTGTTCAACGGGGAC 74
Query 67 ATGGAGCCCGAGGCCGGCGCCGGCGCCGGCGCCGCGGCCTCTTCGGCTGCGGACCCTGCCATTCCGGAGGAGGT 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ATGGAGCCCGAGGCCGGCGCCGGCGCCGGCGCCGCGGCCTCTTCGGCTGCGGACCCTGCCATTCCGGAGGAGGT 148
Query 141 GTGGAATATCAAACAAATGATTAAGTTGACACAGGAACATATAGAGGCCCTATTGGACAAATTTGGTGGGGAGC 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTGGAATATCAAACAAATGATTAAGTTGACACAGGAACATATAGAGGCCCTATTGGACAAATTTGGTGGGGAGC 222
Query 215 ATAATCCACCATCAATATATCTGGAGGCCTATGAAGAATACACCAGCAAGCTAGATGCACTCCAACAAAGAGAA 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATAATCCACCATCAATATATCTGGAGGCCTATGAAGAATACACCAGCAAGCTAGATGCACTCCAACAAAGAGAA 296
Query 289 CAACAGTTATTGGAATCTCTGGGGAACGGAACTGATTTTTCTGTTTCTAGCTCTGCATCAATGGATACCGTTAC 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAACAGTTATTGGAATCTCTGGGGAACGGAACTGATTTTTCTGTTTCTAGCTCTGCATCAATGGATACCGTTAC 370
Query 363 ATCTTCTTCCTCTTCTAGCCTTTCAGTGCTACCTTCATCTCTTTCAGTTTTTCAAAATCCCACAGATGTGGCAC 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATCTTCTTCCTCTTCTAGCCTTTCAGTGCTACCTTCATCTCTTTCAGTTTTTCAAAATCCCACAGATGTGGCAC 444
Query 437 GGAGCAACCCCAAGTCACCACAAAAACCTATCGTTAGAGTCTTCCTGCCCAACAAACAGAGGACAGTGGTACCT 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGAGCAACCCCAAGTCACCACAAAAACCTATCGTTAGAGTCTTCCTGCCCAACAAACAGAGGACAGTGGTACCT 518
Query 511 GCAAGGTGTGGAGTTACAGTCCGAGACAGTCTAAAGAAAGCACTGATGATGAGAGGTCTAATCCCAGAGTGCTG 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCAAGGTGTGGAGTTACAGTCCGAGACAGTCTAAAGAAAGCACTGATGATGAGAGGTCTAATCCCAGAGTGCTG 592
Query 585 TGCTGTTTACAGAATTCAGGATGGAGAGAAGAAACCAATTGGTTGGGACACTGATATTTCCTGGCTTACTGGAG 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGCTGTTTACAGAATTCAGGATGGAGAGAAGAAACCAATTGGTTGGGACACTGATATTTCCTGGCTTACTGGAG 666
Query 659 AAGAATTGCATGTGGAAGTGTTGGAGAATGTTCCACTTACAACACACAACTTTGTACGAAAAACGTTTTTCACC 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGAATTGCATGTGGAAGTGTTGGAGAATGTTCCACTTACAACACACAACTTTGTACGAAAAACGTTTTTCACC 740
Query 733 TTAGCATTTTGTGACTTTTGTCGAAAGCTGCTTTTCCAGGGTTTCCGCTGTCAAACATGTGGTTATAAATTTCA 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTAGCATTTTGTGACTTTTGTCGAAAGCTGCTTTTCCAGGGTTTCCGCTGTCAAACATGTGGTTATAAATTTCA 814
Query 807 CCAGCGTTGTAGTACAGAAGTTCCACTGATGTGTGTTAATTATGACCAACTTGATTTGCTGTTTGTCTCCAAGT 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCAGCGTTGTAGTACAGAAGTTCCACTGATGTGTGTTAATTATGACCAACTTGATTTGCTGTTTGTCTCCAAGT 888
Query 881 TCTTTGAACACCACCCAATACCACAGGAAGAGGCGTCCTTAGCAGAGACTGCCCTAACATCTGGATCATCCCCT 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCTTTGAACACCACCCAATACCACAGGAAGAGGCGTCCTTAGCAGAGACTGCCCTAACATCTGGATCATCCCCT 962
Query 955 TCCGCACCCGCCTCGGACTCTATTGGGCCCCAAATTCTCACCAGTCCGTCTCCTTCAAAATCCATTCCAATTCC 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCCGCACCCGCCTCGGACTCTATTGGGCCCCAAATTCTCACCAGTCCGTCTCCTTCAAAATCCATTCCAATTCC 1036
Query 1029 ACAGCCCTTCCGACCAGCAGATGAAGATCATCGAAATCAATTTGGGCAACGAGACCGATCCTCATCAGCTCCCA 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACAGCCCTTCCGACCAGCAGATGAAGATCATCGAAATCAATTTGGGCAACGAGACCGATCCTCATCAGCTCCCA 1110
Query 1103 ATGTGCATATAAACACAATAGAACCTGTCAATATTGATGACTTGATTAGAGACCAAGGATTTCGTGGTGATG-- 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATGTGCATATAAACACAATAGAACCTGTCAATATTGATGACTTGATTAGAGACCAAGGATTTCGTGGTGATGGA 1184
Query 1175 -------------------------------------------------------------------------- 1174
Sbjct 1185 GCCCCTTTGAACCAGCTGATGCGCTGTCTTCGGAAATACCAATCCCGGACTCCCAGTCCCCTCCTACATTCTGT 1258
Query 1175 --------------------------------------------GAGGATCAACCACAGGTTTGTCTGCTACCC 1204
||||||||||||||||||||||||||||||
Sbjct 1259 CCCCAGTGAAATAGTGTTTGATTTTGAGCCTGGCCCAGTGTTCAGAGGATCAACCACAGGTTTGTCTGCTACCC 1332
Query 1205 CCCCTGCCTCATTACCTGGCTCACTAACTAACGTGAAAGCCTTACAGAAATCTCCAGGACCTCAGCGAGAAAGG 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCCTGCCTCATTACCTGGCTCACTAACTAACGTGAAAGCCTTACAGAAATCTCCAGGACCTCAGCGAGAAAGG 1406
Query 1279 AAGTCATCTTCATCCTCAGAAGACAGGAATCGAATGAAAACACTTGGTAGACGGGACTCGAGTGATGATTGGGA 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AAGTCATCTTCATCCTCAGAAGACAGGAATCGAATGAAAACACTTGGTAGACGGGACTCGAGTGATGATTGGGA 1480
Query 1353 GATTCCTGATGGGCAGATTACAGTGGGACAAAGAATTGGATCTGGATCATTTGGAACAGTCTACAAGGGAAAGT 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GATTCCTGATGGGCAGATTACAGTGGGACAAAGAATTGGATCTGGATCATTTGGAACAGTCTACAAGGGAAAGT 1554
Query 1427 GGCATGGTGATGTGGCAGTGAAAATGTTGAATGTGACAGCACCTACACCTCAGCAGTTACAAGCCTTCAAAAAT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGCATGGTGATGTGGCAGTGAAAATGTTGAATGTGACAGCACCTACACCTCAGCAGTTACAAGCCTTCAAAAAT 1628
Query 1501 GAAGTAGGAGTACTCAGGAAAACACGACATGTGAATATCCTACTCTTCATGGGCTATTCCACAAAGCCACAACT 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GAAGTAGGAGTACTCAGGAAAACACGACATGTGAATATCCTACTCTTCATGGGCTATTCCACAAAGCCACAACT 1702
Query 1575 GGCTATTGTTACCCAGTGGTGTGAGGGCTCCAGCTTGTATCACCATCTCCATATCATTGAGACCAAATTTGAGA 1648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GGCTATTGTTACCCAGTGGTGTGAGGGCTCCAGCTTGTATCACCATCTCCATATCATTGAGACCAAATTTGAGA 1776
Query 1649 TGATCAAACTTATAGATATTGCACGACAGACTGCACAGGGCATGGATTACTTACACGCCAAGTCAATCATCCAC 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TGATCAAACTTATAGATATTGCACGACAGACTGCACAGGGCATGGATTACTTACACGCCAAGTCAATCATCCAC 1850
Query 1723 AGAGACCTCAAGAGTAATAATATATTTCTTCATGAAGACCTCACAGTAAAAATAGGTGATTTTGGTCTAGCTAC 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AGAGACCTCAAGAGTAATAATATATTTCTTCATGAAGACCTCACAGTAAAAATAGGTGATTTTGGTCTAGCTAC 1924
Query 1797 AGAGAAATCTCGATGGAGTGGGTCCCATCAGTTTGAACAGTTGTCTGGATCCATTTTGTGGATGGCACCAGAAG 1870
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGTGAAATCTCGATGGAGTGGGTCCCATCAGTTTGAACAGTTGTCTGGATCCATTTTGTGGATGGCACCAGAAG 1998
Query 1871 TCATCAGAATGCAAGATAAAAATCCATACAGCTTTCAGTCAGATGTATATGCATTTGGAATTGTTCTGTATGAA 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TCATCAGAATGCAAGATAAAAATCCATACAGCTTTCAGTCAGATGTATATGCATTTGGAATTGTTCTGTATGAA 2072
Query 1945 TTGATGACTGGACAGTTACCTTATTCAAACATCAACAACAGGGACCA--------------------------- 1991
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TTGATGACTGGACAGTTACCTTATTCAAACATCAACAACAGGGACCAGGTGCTTTGTCCTCCATGGGAGTATAA 2146
Query 1992 -------------------------------------------------------GATAATTTTTATGGTGGGA 2010
|||||||||||||||||||
Sbjct 2147 TAAATGATGTGGCAAGGGCTTACTCTCCATGAGAGGAATGTGTGACCAACAGAAGGATAATTTTTATGGTGGGA 2220
Query 2011 CGAGGATACCTGTCTCCAGATCTCAGTAAGGTACGGAGTAACTGTCCAAAAGCCATGAAGAGATTAATGGCAGA 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CGAGGATACCTGTCTCCAGATCTCAGTAAGGTACGGAGTAACTGTCCAAAAGCCATGAAGAGATTAATGGCAGA 2294
Query 2085 GTGCCTCAAAAAGAAAAGAGATGAGAGACCACTCTTTCCCCAAATTCTCGCCTCTATTGAGCTGCTGGCCCGCT 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GTGCCTCAAAAAGAAAAGAGATGAGAGACCACTCTTTCCCCAAATTCTCGCCTCTATTGAGCTGCTGGCCCGCT 2368
Query 2159 CATTGCCAAAAATTCACCGCAGTGCATCAGAACCCTCCTTGAATCGGGCTGGTTTCCAAACAGAGGATTTTAGT 2232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CATTGCCAAAAATTCACCGCAGTGCATCAGAACCCTCCTTGAATCGGGCTGGTTTCCAAACAGAGGATTTTAGT 2442
Query 2233 CTATATGCTTGTGCTTCTCCAAAAACACCCATCCAGGCAGGGGGATATGGTGCGTTTCCTGTCCAC-------- 2298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CTATATGCTTGTGCTTCTCCAAAAACACCCATCCAGGCAGGGGGATATGGTGCGTTTCCTGTCCACTGAAACAA 2516
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 2517 ATGAGTGAGAGAGTTCAGGAGAGTAGCAACAAAAGGAAAATAAATGAACATATGTTTGCTTATATGTTAAATTG 2590
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 2591 AATAAAATACTCTCTTTTTTTTTAAGGTGAACCAAAGAACACTTGTGTGGTTAAAGACTAGATATAATTTTTCC 2664
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 2665 CCAAACTAAAATTTATACTTAACATTGGATTTTTAACATCCAAGGGTTAAAATACATAGACATTGCTAAAAATT 2738
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 2739 GGCAGAGCCTCTTCTAGAGGCTTTACTTTCTGTTCCGGGTTTGTATCATTCACTTGGTTATTTTAAGTAGTAAA 2812
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 2813 CTTCAGTTTCTCATGCAACTTTTGTTGCCAGCTATCACATGTCCACTAGGGACTCCAGAAGAAGACCCTACCTA 2886
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 2887 TGCCTGTGTTTGCAGGTGAGAAGTTGGCAGTCGGTTAGCCTGGGTTAGATAAGGCAAACTGAACAGATCTAATT 2960
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 2961 TAGGAAGTCAGTAGAATTTAATAATTCTATTATTATTCTTAATAATTTTTCTATAACTATTTCTTTTTATAACA 3034
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3035 ATTTGGAAAATGTGGATGTCTTTTATTTCCTTGAAGCAATAAACTAAGTTTCTTTTTATAAATTTTGAGTGCAG 3108
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3109 GTGACCAAAAATATTGCTGAGGAGTGGCACGTTTGACATGAGTAAAATGTCTTAACTTCGGATTTTTAGCGGGA 3182
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3183 AAATGTTATAAATTGGAGTTTCTTTTAAATAGCTTTTTTTAAAATACATTAAGGATGTCTCGCTCATGTAGAAG 3256
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3257 TCAAATTTTGTTGCAAACGCATTGCTCCCTTCACACCCAATCTCTCCCCTGCAAAAAATCTTCACAGAATTCTG 3330
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3331 TGAGAACTTTTAGGTGTGTTTTTCTTTGAGATACCTCTGGTTGCCAAACACCAGGTAATAGATTTTTTAAAGTT 3404
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3405 GTTATTAGATTATTCTTACCTCTCATGATGCATATTTTAGCAATCACCTTATCATTGTGTCTCATGTTCTGTCC 3478
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3479 TCCTTATATTCTTTGCCCAGCAAGATTCTACTTATGATGAATGAATGCTCTTCTCCTTTTTTCATTCAATGGTA 3552
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3553 TGAAGTATTTGTTAGGGTTCTTTAGTACTTACACTTTGTTGTGTAGAAAATGACTGTAATGTGGTGGTCAGTGT 3626
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3627 ATTCTTACTGTGATTCAGAGGGAATCAAAAGTAGAAAGCAACAGCACGTGGTCCTATCAAAGATTTGGCCATCT 3700
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3701 CTGCTTCACTGTCAGCCTCTTAACTATATCTTCACTTACTCAATTTGGTTTTGTCATGATTTTTAAATGTAGCC 3774
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3775 AATAGATCAAGGTTCTTCCAGTAAACACATATCTGCATAAATGCCTCCTTGAAGTCAATAAAGAAGGAAATTGA 3848
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3849 GAAGACTTTAAATTAATGATAATTTAGTTTTTAAGTACCCACAAATAAATTTTTGAAACATTTTCTTTATTTGA 3922
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3923 ATACTTAGATGTCATCCAGGAAAATCACTCAATAATAATTACGGCAAATCTTTAACCCCTCATTTGGGTAGCTT 3996
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 3997 AAGATAAGTAATGCCATTATGAATCAGAATTGATTCATGACTTTAGTTAAGAAAATGAAAAGGAACATTTCACG 4070
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 4071 TATTTTTAAAAATGATACTAAGGAATAAAGAAGTACAACTATTGGAAAATATCTAAGTATATGATTTTTAAATC 4144
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 4145 CTCCAGTGGCATTAAATATATGATTATTAGTAATTGTTAGATAGGGTTTTATTCATTCACAAATAGAAGACTAG 4218
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 4219 CAAGCATGTAACTAACAAAGTTTTTACAAAATTGACTTTGTGGAATGCTCCAAATGTTTGGCCATTTTGAGGCA 4292
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 4293 CAAGGTCAGGGGTCTCTTTATTGATAGAGCTCCTTCTATAATTTCCCAGCATACCTGCCTCACAGTTATCTTCC 4366
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 4367 TTTCATTGTTCACTCTCTTTTTCTTCTCAATGCCATCCTGCCTAGGCTCCCATCATCTGCATCTGACACCTTTC 4440
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 4441 CTTTCTTTCTTTACTAGTCTCCTTTGCGATGGGTGTGGCTAAGCTCTGTAGAGCCACTCAGAAACTCATTGTTC 4514
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 4515 CATTCTGTAGCCAGTAAAACATGCCTCCAAAGTGTCACAGAGTAATTCTACTCTCTCTTTTAAATTAGGTCCAC 4588
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 4589 CGGAAATGTTAGTGAAAGGACATTAAAAATGTGACAGGTGACATGTTTAGCTAACATGGATCTGGAGAAATAGG 4662
Query 2299 -------------------------------------------------------------------------- 2298
Sbjct 4663 AAGCAGTAGAATTAAATGTTTCCCTTTCAGGTTTAATTGTATTTGTTCTTGGGTTTTGTTTTATACTGAGTTTT 4736
Query 2299 --------------------------------------- 2298
Sbjct 4737 AAATATATTCTCCAAATAAAAACATTATTTTTTCTAACC 4775