Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_00154
• Subject: XM_006510786.1
• Aligned Length: 1187
• Identities: 881
• Gaps: 175

Alignment

Query    1  ATGGCGGTTGTAGCGGCGGCTGC-----CGGCT-GGCTACTCAGGCTCAGGGCGGCAGGGGCTGAGGGGCACTG  68
            ||||||      ||||.||||||     |||.| ||||.||..|||||.||||.||.||.||.|||.|||   |
Sbjct    1  ATGGCG------GCGGTGGCTGCGCGCGCGGGTGGGCTGCTGTGGCTCCGGGCTGCGGGAGCAGAGCGGC---G  65

Query   69  GCG--TCGG-CTTC-CTGGCGCGGGGCTGGCGCGGGGCTTTTTGCACCCCGCCGCGACTGTCGAGGATGCGGCC  138
            |||  .||| ||.| || ||||.|.|||||.||..|||||..||||.||||      ..|.||||||..|||||
Sbjct   66  GCGGTGCGGACTGCGCT-GCGCTGCGCTGGTGCAAGGCTTCCTGCAACCCG------GGGGCGAGGACACGGCC  132

Query  139  CAGAGGCGGCAGGTGGCTCATTTTACTTTCCAGCCAGATCCGGAGCCCCGGGAGTACGGGCAAACTCAGAAAAT  212
            ||||.|||||.||||||.||.||.|||||||      |||||||.||                           
Sbjct  133  CAGAAGCGGCGGGTGGCCCACTTCACTTTCC------ATCCGGACCC---------------------------  173

Query  213  GAATCTTTTCCAGTCTGTAACAAGTGCCTTGGATAACTCATTGGCCAAAGA-TCCTACTGCAGTAATATTTGGT  285
                                                            ||| |||  ||||||           
Sbjct  174  ------------------------------------------------AGAGTCC--CTGCAG-----------  186

Query  286  GAAGATGTTGCCTTTGGTGGAGTCTTTAGATGCACTGTTGGCTTGCGAGACAAATATGGAAAAGATAGAGTTTT  359
                                                                  |||||||||||||||||.||
Sbjct  187  ------------------------------------------------------TATGGAAAAGATAGAGTGTT  206

Query  360  TAATACCCCATTGTGTGAACAAGGAATTGTTGGATTTGGAATCGGAATTGCGGTCACTGGAGCTACTGCCATTG  433
            |||.|||||.|||||||||||||||||.|||||||||||.||.|||||.||||||||.||.|||||.||.||||
Sbjct  207  TAACACCCCGTTGTGTGAACAAGGAATAGTTGGATTTGGCATTGGAATCGCGGTCACCGGTGCTACAGCTATTG  280

Query  434  CGGAAATTCAGTTTGCAGATTATATTTTCCCTGCATTTGATCAGATTGTTAATGAAGCTGCCAAGTATCGCTAT  507
            |||||||.||||||||.||.||||||||||||||.||||||||||||||.||.||||||||||||||||||||.
Sbjct  281  CGGAAATCCAGTTTGCCGACTATATTTTCCCTGCCTTTGATCAGATTGTCAACGAAGCTGCCAAGTATCGCTAC  354

Query  508  CGCTCTGGGGATCTTTTTAACTGTGGAAGCCTCACTATCCGGTCCCCTTGGGGCTGTGTTGGTCATGGGGCTCT  581
            |||||.||.||||||||.||||||||.||||||||.||||||.||||.|||||.|||||.||.|||||||||||
Sbjct  355  CGCTCAGGTGATCTTTTCAACTGTGGGAGCCTCACCATCCGGGCCCCGTGGGGTTGTGTGGGCCATGGGGCTCT  428

Query  582  CTATCATTCTCAGAGTCCTGAAGCATTTTTTGCCCATTGCCCAGGAATCAAGGTGGTTATACCCAGAAGCCCTT  655
            |||.||||||||||||||||||||.||||||||||||||||||||.|||||||||||.||||||.|||||||||
Sbjct  429  CTACCATTCTCAGAGTCCTGAAGCCTTTTTTGCCCATTGCCCAGGGATCAAGGTGGTAATACCCCGAAGCCCTT  502

Query  656  TCCAGGCCAAAGGACTTCTTTTGTCATGCATAGAGGATAAAAATCCTTGTATATTTTTTGAACCTAAAATACTT  729
            ||||||||||.||||||||.||||||||||||||.|||||||||||.|||||||||||||||||||||||||||
Sbjct  503  TCCAGGCCAAGGGACTTCTGTTGTCATGCATAGAAGATAAAAATCCATGTATATTTTTTGAACCTAAAATACTT  576

Query  730  TACAGGGCAGCAGCGGAAGAAGTCCCTATAGAACCATACAACATCCCACTGTCCCAGGCCGAAGTCATACAGGA  803
            |||.|||||||||.||||.|.|||||..|||||||.|||||.|||||..||||.|||||.||||||||.|||||
Sbjct  577  TACCGGGCAGCAGTGGAACAGGTCCCAGTAGAACCCTACAAGATCCCCTTGTCTCAGGCTGAAGTCATCCAGGA  650

Query  804  AGGGAGTGATGTTACTCTAGTTGCCTGGGGCACTCAGGTTCATGTGATCCGAGAGGTAGCTTCCATGGCAAAAG  877
            .||.||.|||||.|||||.||||||||||||||||||||||||||.|||||.|||||.|||||||||||..|||
Sbjct  651  GGGCAGCGATGTGACTCTGGTTGCCTGGGGCACTCAGGTTCATGTCATCCGGGAGGTGGCTTCCATGGCCCAAG  724

Query  878  AAAAGCTTGGAGTGTCTTGTGAAGTCATTGATCTGAGGACTATAATACCTTGGGATGTGGACACAATTTGTAAG  951
            |||||||||||||.||||||||||||||.||||||.||||.||..|.||||||||||||||.|||.||||.|||
Sbjct  725  AAAAGCTTGGAGTATCTTGTGAAGTCATCGATCTGCGGACAATTGTGCCTTGGGATGTGGATACAGTTTGCAAG  798

Query  952  TCTGTGATCAAAACAGGGCGACTGCTAATCAGTCACGAGGCTCCCTTGACAGGCGGCTTTGCATCGGAAATCAG  1025
            ||||||||||||||.|||||||||.|.|||||.||||||||||||||.||||||||||||||.||.||.|||||
Sbjct  799  TCTGTGATCAAAACCGGGCGACTGTTGATCAGCCACGAGGCTCCCTTAACAGGCGGCTTTGCCTCTGAGATCAG  872

Query 1026  CTCTACAGTTCAGGAGGAATGTTTCTTGAACCTAGAGGCTCCTATATCAAGAGTATGTGGTTATGACACACCAT  1099
            |||.||.||.|||||.||||||||||||||||||||||||||.|||||..||||.||.||.||||||||.||.|
Sbjct  873  CTCCACGGTCCAGGAAGAATGTTTCTTGAACCTAGAGGCTCCAATATCTCGAGTTTGCGGATATGACACCCCGT  946

Query 1100  TTCCTCACATTTTTGAACCATTCTACATCCCAGACAAATGGAAGTGTTATGATGCCCTTCGAAAAATGATCAAC  1173
            ||||||||||.|||||.||.||.||.||||||||||||||||||||.||.|||||||||||.||.|||||||||
Sbjct  947  TTCCTCACATCTTTGAGCCCTTTTATATCCCAGACAAATGGAAGTGCTACGATGCCCTTCGCAAGATGATCAAC  1020

Query 1174  TAT  1176
            |||
Sbjct 1021  TAT  1023