Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00215
- Subject:
- NM_001109761.2
- Aligned Length:
- 2259
- Identities:
- 722
- Gaps:
- 1464
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCCTACCTGCTGCCGGGATTCTTCTGTGACAGGGTGATCCGAGAAAGGGACAGGAGAAATGGAGAGGGCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTCTCACAACCTCTCAAGTTTGAGGGGCAGGATTTTGTCGTTCTCAAACAACAGTGTCTGGCTCAGAAGTGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTTTGAAGACCGTGTCTTCCCAGCAGGTGTGCAGGCCCTTGGCTCCCATGAGCTGAGCCAGAAAGCCAAGATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGGCCATCACTTGGAAGAGGCCAAAGGAAATTTGTGAGAATCCCCGGTTTATCATTGGTGGAGCCAACAGGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGACATCTGCCAAGGAGATCTAGGGGACTGCTGGTTTCTTGCAGCCATCGCCTGCCTGACCCTGAATGAGCGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCTTTTCCGAGTTATACCCCATGATCAAAGTTTCACTGAAAACTACGCAGGGATCTTCCACTTCCAGTTCTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCTATGGAGACTGGGTAGATGTGGTCATTGACGACTGTCTGCCAACATACAACAATCAGCTGGTTTTCACCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCCAACCACCGCAATGAGTTCTGGAGTGCTCTCCTTGAGAAGGCTTATGCCAAGCTCCATGGCTCCTATGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTCTGAAAGGTGGGAATACCACAGAAGCCATGGAGGACTTCACAGGAGGGGTGACAGAGTTTTTTGAGATCAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATGCTCCGAGTGACATGTACAAGATTATGAGGAAAGCTATCGAGAGAGGCTCCCTCATGGGCTGCTCCATTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CACAATTGTTCCAGTGCAGTATGAAACAAGAATGGCCTGTGGGTTGGTGAAAGGGCATGCCTATTCAGTCACTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCTGGAGGAGGCCCTGTTCAAAGGTGAGAAGGTGAAGTTGGTGCGGCTGCGGAACCCCTGGGGCCAGGTGGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGAACGGCTCTTGGAGTGATGGTTGGAAGGACTGGAGCTTTGTAGACAAAGATGAGAAGGCCCGTCTACAGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCAGGTTACTGAGGATGGAGAGTTCTGGATGTCATATGATGACTTCGTCTACCATTTCACGAAGCTGGAGATCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCAACCTCACAGCTGACGCCCTGGAGTCCGATAAGCTTCAGACCTGGACGGTGTCTGTAAACGAGGGCCGCTGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTGAGGGGCTGTTCTGCTGGAGGCTGCCGAAACTTCCCAGACACTTTCTGGACCAACCCGCAGTACCGTCTCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCTTCTGGAGGAAGACGATGACCCTGAGGACTCTGAGGTAATCTGCAGCTTCCTCGTGGCTCTGATGCAGAAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACCGGCGCAAGGACCGGAAGCTGGGGGCCAACCTCTTCACTATTGGCTTCGCCATCTACGAGGTTCCCAAAGAG 1332
Query 1 ATGCACGGGAACAAGCAGCACCTGCAGAAGGACTTCTTCCTGTACAACGCCTCCAAGGCCAGGAGCAAAACCTA 74
|||||||||||.|||||.|||||||||||||||||||||.||||||||||||||||||||||.|||||||||||
Sbjct 1333 ATGCACGGGAATAAGCAACACCTGCAGAAGGACTTCTTCTTGTACAACGCCTCCAAGGCCAGAAGCAAAACCTA 1406
Query 75 CATCAACATGCGGGAGGTGTCCCAGCGCTTCCGCCTGCCTCCCAGCGAGTACGTCATCGTGCCCTCCACCTACG 148
|||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||.|||||||||||||
Sbjct 1407 CATCAACATGCGGGAGGTGTCCCAGCGCTTCCGCCTGCCACCCAGCGAGTATGTCATCGTACCCTCCACCTACG 1480
Query 149 AGCCCCACCAGGAGGGGGAATTCATCCTCCGGGTCTTCTCTGAAAAGAGGAACCTCTCTGAGGAAGTTGAAAAT 222
|||||||||||||||||||||||||||||||.||||||||.|||||||||||.|||||||||||||.|||||||
Sbjct 1481 AGCCCCACCAGGAGGGGGAATTCATCCTCCGAGTCTTCTCCGAAAAGAGGAATCTCTCTGAGGAAGCTGAAAAT 1554
Query 223 ACCATCTCCGTGGATCGGCCAGTGAAAAAGAAAAAAACCAAGCCCATCATCTTCGTTTCGGACAGAGCAAACAG 296
||.|||||.||||||||||||||| |||||
Sbjct 1555 ACAATCTCTGTGGATCGGCCAGTG-------------CCAAG-------------------------------- 1583
Query 297 CAACAAGGAGCTGGGTGTGGACCAGGAGTCAGAGGAGGGCAAAGGCAAAACAAGCCCTGATAAGCAAAAGCAGT 370
Sbjct 1584 -------------------------------------------------------------------------- 1583
Query 371 CCCCACAGCCACAGCCTGGCAGCTCTGATCAGGAAAGTGAGGAACAGCAACAATTCCGGAACATTTTCAAGCAG 444
|||||||..|.|.||.||||||||||||||.|||||.||||||||||||||.||||.||||
Sbjct 1584 -------------GCCTGGCCACACAGACCAGGAAAGTGAGGAGCAGCAGCAATTCCGGAACATCTTCAGGCAG 1644
Query 445 ATAGCAGGAGATGACATGGAGATCTGTGCAGATGAGCTCAAGAAGGTCCTTAACACAGTCGTGAACAAACACAA 518
||.|||||.||.|||||||||||||||||||||||.||||||||.|||||.||||||||.||||||||||||||
Sbjct 1645 ATCGCAGGCGACGACATGGAGATCTGTGCAGATGAACTCAAGAATGTCCTCAACACAGTGGTGAACAAACACAA 1718
Query 519 GGACCTGAAGACACACGGGTTCACACTGGAGTCCTGCCGTAGCATGATTGCGCTCATGGATACAGATGGCTCTG 592
|||||||||||||||.||||||||.||||||||||||.|.||||||||.||.||||||||||||||||||||||
Sbjct 1719 GGACCTGAAGACACAAGGGTTCACGCTGGAGTCCTGCAGAAGCATGATAGCTCTCATGGATACAGATGGCTCTG 1792
Query 593 GAAAGCTCAACCTGCAGGAGTTCCACCACCTCTGGAACAAGATTAAGGCCTGGCAGAAAATTTTCAAACACTAT 666
|||..||.||.||.||.||||||||.|||||||||||.|||||.|||||||||||||||||.|||||.||||||
Sbjct 1793 GAAGACTGAATCTTCAAGAGTTCCATCACCTCTGGAAAAAGATCAAGGCCTGGCAGAAAATCTTCAAGCACTAT 1866
Query 667 GACACAGACCAGTCCGGCACCATCAACAGCTACGAGATGCGAAATGCAGTCAACGACGCAGGATTCCACCTCAA 740
|||||||||||.|||||.||||||||.|||||.||||||||||||||||||||.||.|||||.|||||.|||||
Sbjct 1867 GACACAGACCATTCCGGTACCATCAATAGCTATGAGATGCGAAATGCAGTCAATGATGCAGGCTTCCATCTCAA 1940
Query 741 CAACCAGCTCTATGACATCATTACCATGCGGTACGCAGACAAACACATGAACATCGACTTTGACAGTTTCATCT 814
||.|||.||||||||||||||.||||||||.||.||.|||||||||||||||||||||||||||||.|||||||
Sbjct 1941 CAGCCAACTCTATGACATCATCACCATGCGCTATGCGGACAAACACATGAACATCGACTTTGACAGCTTCATCT 2014
Query 815 GCTGCTTCGTTAGGCTGGAGGGCATGTTCAGAGCTTTTCATGCATTTGACAAGGATGGAGATGGTATCATCAAG 888
||||||||||.||||||||.||.|||||||||||||||.|.|||||||||||||||||.||||||||||||||.
Sbjct 2015 GCTGCTTCGTCAGGCTGGAAGGGATGTTCAGAGCTTTTAACGCATTTGACAAGGATGGCGATGGTATCATCAAA 2088
Query 889 CTCAACGTTCTGGAGTGGCTGCAGCTCACCATGTATGCC 927
||.||.||.||.||||||||||||||.||||||||||||
Sbjct 2089 CTGAATGTACTTGAGTGGCTGCAGCTTACCATGTATGCC 2127
