Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_00303
• Subject: XM_006498560.3
• Aligned Length: 1405
• Identities: 746
• Gaps: 575

Alignment

Query    1  ATGGCCCTGACCCTGTTTGATACAGATGAATATAGACCTCCTGTTTGGAAATCTTACTTATATCAGCTACAACA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGAAGCCCCTCATCCTCGAAGAATTACCTGTACTTGCGAGGTGGAAAACAGACCAAAGTATTATGGAAGAGAGT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTCATGGCATGATCTCCAGAGAAGCAGCCGACCAGCTCTTGATTGTGGCTGAGGGGAGCTACCTCATCCGGGAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGCCAGCGGCAGCCAGGGACCTACACTTTGGCTTTAAGATTTGGAAGTCAAACCAGAAACTTCAGGCTCTACTA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CGATGGCAAGCACTTTGTTGGGGAGAAACGCTTTGAGTCCATCCACGATCTGGTGACTGATGGCTTGATTACTC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TCTATATTGAAACCAAGGCAGCAGAATACATTGCCAAGATGACGATAAACCCAATTTATGAGCACGTAGGATAC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  ACAACCTTAAACAGAGAGCCAGCATACAAAAAACATATGCCAGTCCTGAAAGAGACACATGATGAGAGAGA---  515
                                                                         ||||.|| ||   
Sbjct    1  -------------------------------------------------------------ATGAAAG-GAGTT  12

Query  516  -TTC------TACAGGCCAGGATGGGGTGTCAGAGAA-AAGGTTGACATCACTTGTT------------AGAAG  569
             |||      ||||.||||.|||            || ||.|.||.|    |||.||            |.|||
Sbjct   13  GTTCAAATCGTACATGCCATGAT------------AATAACGCTGTC----CTTTTTTTCCCCAGGTGCAAAAG  70

Query  570  AGCAA----CTCTGAAAGAAAAC-GAGCAAATTCCAAAATATGAAAAGATTCACAATTTCAAGGTGCATACATT  638
            ||.||    || |.||||..||| ||.|            |||          ||||||  .|||||||||.||
Sbjct   71  AGAAAAGGGCT-TTAAAGCTAACGGACC------------ATG----------CAATTT--GGGTGCATACGTT  119

Query  639  CAGAGGGCCACACTGGTGTGAATACTGTGCCAACTTTATGTGGGGTCTCATTGCTCAGGGAGTGAAATGTGCAG  712
            |.||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||||||||||
Sbjct  120  CCGAGGGCCACACTGGTGTGAATACTGTGCCAACTTCATGTGGGGCCTCATTGCTCAGGGAGTGAAATGTGCAG  193

Query  713  ATTGTGGTTTGAATGTTCATAAGCAGTGTTCCAAGATGGTCCCAAATGACTGTAAGCCAGACTTGAAGCATGTC  786
            |||||||.|||||||||||.|||||||||||||||||||||||.|||||||||||||||||..|||||||.||.
Sbjct  194  ATTGTGGGTTGAATGTTCACAAGCAGTGTTCCAAGATGGTCCCCAATGACTGTAAGCCAGATCTGAAGCACGTG  267

Query  787  AAAAAGGTGTACAGCTGTGACCTTACGACGCTCGTGAAAGCACATACCACTAAGCGGCCAATGGTGGTAGACAT  860
            ||.||||||||||||||||||||.||.||||||||||||||.||.|.|||.|||||||||||||||||||||||
Sbjct  268  AAGAAGGTGTACAGCTGTGACCTGACAACGCTCGTGAAAGCTCACATCACCAAGCGGCCAATGGTGGTAGACAT  341

Query  861  GTGCATCAGGGAGATTGAGTCTAGAGGTCTTAATTCTGAAGGACTATACCGAGTATCAGGATTTAGTGACCTAA  934
            |||||||||||||||.|||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||.|
Sbjct  342  GTGCATCAGGGAGATCGAGTCCAGAGGTCTTAATTCTGAAGGACTCTACCGAGTGTCAGGATTTAGTGACCTGA  415

Query  935  TTGAAGATGTCAAGATGGCTTTCGACAGAGATGGTGAGAAGGCAGATATTTCTGTGAACATGTATGAAGATATC  1008
            ||||||||||||||||||||||.||.|||||||||||||||||.|||||||||||||||||||||||.||.|||
Sbjct  416  TTGAAGATGTCAAGATGGCTTTTGATAGAGATGGTGAGAAGGCGGATATTTCTGTGAACATGTATGAGGACATC  489

Query 1009  AACATTATCACTGGTGCACTTAAACTGTACTTCAGGGATTTGCCAATTCCACTCATTACATATGATGCCTACCC  1082
            |||||||||||||||||||||||||||||||||||||||.||||||||||.|||||.|||||.|||||||||||
Sbjct  490  AACATTATCACTGGTGCACTTAAACTGTACTTCAGGGATCTGCCAATTCCTCTCATCACATACGATGCCTACCC  563

Query 1083  TAAGTTTATAGAATCTGCCAAAATTATGGATCCGGATGAGCAATTGGAAACCCTTCATGAAGCACTGAAACTAC  1156
            .|||||.||.||.|||||||||||||||||.||.||.|||||||||||.||||||||.||||||||||.|...|
Sbjct  564  CAAGTTCATTGAGTCTGCCAAAATTATGGACCCTGACGAGCAATTGGAGACCCTTCACGAAGCACTGAGATCGC  637

Query 1157  TGCCACCTGCTCACTGCGAAACCCTCCGGTACCTCATGGCACATCTAAAGAGAGTGACCCTCCACGAAAAGGAG  1230
            ||||.|||||.||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||.||.||||||
Sbjct  638  TGCCGCCTGCCCACTGCGAGACGCTCCGGTACCTCATGGCGCATCTCAAGAGAGTGACCCTTCATGAGAAGGAG  711

Query 1231  AATCTTATGAATGCAGAGAACCTTGGAATCGTCTTTGGACCCACCCTTATGAGATCTCCAGAACTAGACGCCAT  1304
            |||||.||||.|||||||||||||||.|||||.||||||||.|||||.||||||||.|||||.||.|||.||||
Sbjct  712  AATCTGATGAGTGCAGAGAACCTTGGGATCGTGTTTGGACCAACCCTCATGAGATCCCCAGAGCTCGACCCCAT  785

Query 1305  GGCTGCATTGAATGATATACGGTATCAGAGACTGGTGGTGGAGCTGCTTATCAAAAACGAAGACATTTTATTT  1377
            |||.||..||||.||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  786  GGCCGCCCTGAACGACATACGCTATCAGAGACTGGTGGTGGAGCTGCTTATCAAAAACGAAGACATTTTATTT  858