Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_00411
• Subject: XM_017012544.1
• Aligned Length: 1517
• Identities: 917
• Gaps: 445

Alignment

Query    1  ATGGCTCTCATCCCAGACTTGGCCATGGAAACCTGGCTTCTCCTGGCTGTCAGCCTGGTGCTCCTCTATCTATA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGGAACCCATTCACATGGACTTTTTAAGAAGCTTGGAATTCCAGGGCCCACACCTCTGCCTTTTTTGGGAAATA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTTTGTCCTACCATAAGGGCTTTTGTATGTTTGACATGGAATGTCATAAAAAGTATGGAAAAGTGTGGGGCTTT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TATGATGGTCAACAGCCTGTGCTGGCTATCACAGATCCTGACATGATCAAAACAGTGCTAGTGAAAGAATGTTA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TTCTGTCTTCACAAACCGGAGGCCTTTTGGTCCAGTGGGATTTATGAAAAGTGCCATCTCTATAGCTGAGGATG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AAGAATGGAAGAGATTACGATCATTGCTGTCTCCAACCTTCACCAGTGGAAAACTCAAGGAGATGGTCCCTATC  444
                                                                          ||||||||.|||
Sbjct    1  --------------------------------------------------------------ATGGTCCCCATC  12

Query  445  ATTGCCCAGTATGGAGATGTGTTGGTGAGAAATCTGAGGCGGGAAGCAGAG-ACAGGCAAGCCTGTCACCTTGA  517
            |||.||||.|.|||||||.||||||||||||..|||||||.|||||||||| ||| |||||.|..|||.|||||
Sbjct   13  ATTTCCCAATGTGGAGATATGTTGGTGAGAAGCCTGAGGCAGGAAGCAGAGAACA-GCAAGTCCATCAACTTGA  85

Query  518  AAGACGTCTTTGGGGCCTACAGCATGGATGTGATCACTAGCACATCATTTGGAGTGAACATCGACTCTCTCAAC  591
            ||||..|||||||||||||||.|||||||||.||||||.||||||.|||||||||||||.|.||.|||||||||
Sbjct   86  AAGATTTCTTTGGGGCCTACACCATGGATGTAATCACTGGCACATTATTTGGAGTGAACTTGGATTCTCTCAAC  159

Query  592  AATCCACAAGACCCCTTTGTGGAAAACACCAAGAAGCTTTTAAGATTTGATTTTTTGGATCCATTCTTTCTCTC  665
            |||||||||||.||||||.||.||||.|..|||||||||||||.|||.||||||||||||||.||.||.||||.
Sbjct  160  AATCCACAAGATCCCTTTCTGAAAAATATGAAGAAGCTTTTAAAATTGGATTTTTTGGATCCCTTTTTACTCTT  233

Query  666  AATAACAGTCTTTCCATTCCTCATCCCAATTCTTGAAGTATTAAATATCTGTGTGTTTCCAAGAGAAGTTACAA  739
            ||||.||.||||||||||.||.|.||||.||.||||||...||||||||.||.|||||||||.|||.|||||..
Sbjct  234  AATATCACTCTTTCCATTTCTTACCCCAGTTTTTGAAGCCCTAAATATCGGTTTGTTTCCAAAAGATGTTACCC  307

Query  740  ATTTTTTAAGAAAATCTGTAAAAAGGATGAAAGAAAGTCGCCTCGAAGATACACAAAAGCACCGAGTGGATTTC  813
            |||||||||.|||.||..|..|||||||||||||||||||||||.||||||.|||||||||.|||||.||||||
Sbjct  308  ATTTTTTAAAAAATTCCATTGAAAGGATGAAAGAAAGTCGCCTCAAAGATAAACAAAAGCATCGAGTAGATTTC  381

Query  814  CTTCAGCTGATGATTGACTCTCAGAATTCAAAAGAAACTGAGTCCCACAAAGCTCTGTCCGATCTGGAGCTCGT  887
            .||||.|.||||||.|||||.||||||||.||||||||..|||||||.|||||||||||.|||||||||||.||
Sbjct  382  TTTCAACAGATGATCGACTCCCAGAATTCCAAAGAAACAAAGTCCCATAAAGCTCTGTCTGATCTGGAGCTTGT  455

Query  888  GGCCCAATCAATTATCTTTATTTTTGCTGGCTATGAAACCACGAGCAGTGTTCTCTCCTTCATTATGTATGAAC  961
            ||||||.|||||||||.|.||||||||||.||||||.||.||.||||....||||.||||||||||||||||||
Sbjct  456  GGCCCAGTCAATTATCATCATTTTTGCTGCCTATGACACAACTAGCACCACTCTCCCCTTCATTATGTATGAAC  529

Query  962  TGGCCACTCACCCTGATGTCCAGCAGAAACTGCAGGAGGAAATTGATGCAGTTTTACCCAATAAGGCACCACCC  1035
            ||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||...|
Sbjct  530  TGGCCACTCACCCTGATGTCCAGCAGAAACTGCAGGAGGAGATTGACGCAGTTTTACCCAATAAGGCACCTGTC  603

Query 1036  ACCTATGATACTGTGCTACAGATGGAGTATCTTGACATGGTGGTGAATGAAACGCTCAGATTATTCCCAATTGC  1109
            |||||.|||.|..||.|||||||||||||.|||||||||||||||||||||||||||||||||||||||.|||.
Sbjct  604  ACCTACGATGCCCTGGTACAGATGGAGTACCTTGACATGGTGGTGAATGAAACGCTCAGATTATTCCCAGTTGT  677

Query 1110  TATGAGACTTGAGAGGGTCTGCAAAAAAGATGTTGAGATCAATGGGATGTTCATTCCCAAAGGGGTGGTGGTGA  1183
            ||..|||.||..|||.||||||||.||||||.||||.||||||||..|||||||||||||||||.|.|..||||
Sbjct  678  TAGTAGAGTTACGAGAGTCTGCAAGAAAGATATTGAAATCAATGGAGTGTTCATTCCCAAAGGGTTAGCAGTGA  751

Query 1184  TGATTCCAAGCTATGCTCTTCACCGTGACCCAAAGTACTGGACAGAGCCTGAGAAGTTCCTCCCTGAA---AGA  1254
            ||.||||||.||||||||||||||.||||||||||||||||||||||||||||||||||..|||||||   ||.
Sbjct  752  TGGTTCCAATCTATGCTCTTCACCATGACCCAAAGTACTGGACAGAGCCTGAGAAGTTCTGCCCTGAAAGTAGG  825

Query 1255  TTCAGCAAGAAGAACAAGGACAACATAGATCCTTACATATACACACCCTTTGGAAGTGGACCCAGAAACTGCAT  1328
            |||||.||||||||||||||||.||||||||.|||||.|||||.|||.||||||..|||||||.||||||||||
Sbjct  826  TTCAGTAAGAAGAACAAGGACAGCATAGATCTTTACAGATACATACCTTTTGGAGCTGGACCCCGAAACTGCAT  899

Query 1329  TGGCATGAGGTTTGCTCTCATGAACATGAAACTTGCTCTAATCAGAGTCCTTCAGAACTTCTCCTTCAAACCTT  1402
            ||||||||||||||||||||..|||||.|||||||||.|.||.||||..||.||||||||||||||||||||||
Sbjct  900  TGGCATGAGGTTTGCTCTCACAAACATAAAACTTGCTGTCATTAGAGCACTGCAGAACTTCTCCTTCAAACCTT  973

Query 1403  GTAAAGAAACACAGATCCCCCTGAAATT----AAGCTTAGGAGGACTTCTTCAACCAGAAAAACCCGTTGTTCT  1472
            |||||||.||.||||||||.||||||||    ||.||    |..|.|||||||||||||||||||..|||||||
Sbjct  974  GTAAAGAGACTCAGATCCCACTGAAATTAGACAATCT----ACCAATTCTTCAACCAGAAAAACCTATTGTTCT  1043

Query 1473  AAAGGTTGAGTCAAGGGATGGCACCGTAAGTGGAGCC  1509
            |||.||..|.|.|||.|||||.|....|||||||.||
Sbjct 1044  AAAAGTGCACTTAAGAGATGGGATTACAAGTGGACCC  1080