Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00464
- Subject:
- NM_001198943.1
- Aligned Length:
- 2052
- Identities:
- 356
- Gaps:
- 1692
Alignment
Query 1 ATGATTGAAGATAGTGGGAAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTTGTTCAGAAGAAATGCAATT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTCCACTATTTTTTACCAGCTCAACAAACGGATGCCAACCAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TCACCAAATCCATGTGGAGCAGTCCATCAGCCTCCTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAAGGCC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ATGGTAAAATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCACATTGTGTGGAGGGAAGATCATGGACAAATTA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AGATATATTTTCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTTATGGACGATATGACCAATTCCTTCGGGA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AGTTCTCAAACTACCCACGGCAGTTTTTGAAGGTCCTTCATTTGGTTACACAGAACAGTCAGCCAGATCCTGTT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TCTCCCAACAGAAAAAAGTCACGTTAAATGGTTTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAGTGTCTG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTCCTACTGCCA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CAGTGAGAGTATGATGGGATTTCGCTACCGATGCCAACAGTGTCACAATTACCAGCTCTGTCAGGACTGCTTCT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ----------ATGATGGGATTTCGCTACCGATGCCAACAGTGTCACAATTACCAGCTCTGTCAGGACTGCTTCT 64
Query 815 GGAGGGGACATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGAAAGAGTACACGTCATGGAAATCACCTGCT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 65 GGAGGGGACATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGAAAGAGTACACGTCATGGAAATCACCTGCT 138
Query 889 AAGAAGCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 139 AAGAAGCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCC 212
Query 963 AGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 213 AGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCC 286
Query 1037 TGTTCTCCCACTCTGTTCCCTCCTCAGGAAGTCCTTTTATTACCAGGAGC------------TCGGACGGTGCT 1098
|||||||||||||||||||||||||||||||||||||||||||||||||| ||..||.| |||
Sbjct 287 TGTTCTCCCACTCTGTTCCCTCCTCAGGAAGTCCTTTTATTACCAGGAGCATGCTTGAGAGTTCAAACCG-GCT 359
Query 1099 T-------------------TT----GGTGGATGCGTC------------------------------------ 1113
| || ||| |||||.|
Sbjct 360 TGATGAAGAACACAGGCTAATTGCCAGGT--ATGCGGCAAGGCTGGCAGCAGAGTCCTCTTCGTCTCAGCCACC 431
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 432 TCAGCAGAGAAGTGCTCCTGACATCTCTTTCACCATCGATGCGAATAAGCAGCAAAGGCAGCTGATTGCTGAGC 505
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 506 TAGAAAACAAGAACAGAGAAATCTTACAGGAGATCCAGAGACTTCGGCTAGAGCATGAACAAGCTTCTCAGCCC 579
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 580 ACGCCAGAGAAGGCACAGCAAAACCCCACCCTGCTGGCAGAACTCCGGCTCCTCAGACAGCGCAAAGATGAGCT 653
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 654 GGAACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGAGCTAATGGTCCAGTTGGAGGGTCTCATGAAGCTAC 727
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 728 TAAAGACTCAGGGGGCAGGCTCTCCCCGCTCCTCCCCCAGCCACACCATCAGCAGGCCAATTCCCATGCCCATC 801
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 802 CGGTCAGCGTCAGCCTGCTCCACCCCGACGCACACGCCGCAGGACTCCCTCACAGGAGTAGGGGGAGATGTACA 875
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 876 AGAGGCATTTGCACAAAGTTCAAGAAGAAACTTAAGGAATGACTTGCTAGTGGCTGCAGATTCCATCACTAACA 949
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 950 CTATGTCCTCTCTTGTGAAAGAGCTGAATTCTGAGGTTGGGAGTGAAACAGAGAGTAATGTGGATTCTGAATTT 1023
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1024 GCACGGACTCAGTTTGAGGATCTTGTTCCCTCACCAACCTCTGAAAAGGCTTTTCTAGCGCAAATCCATGCCCG 1097
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1098 AAAACCTGGGTACATTCACAGTGGAGCTACCACAAGTACCATGCGTGGCGACATGGTTACGGAGGATGCAGATC 1171
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1172 CCTATGTGCAGCCTGAAGATGAAAACTATGAAAATGACTCTGTCCGGCAGCTGGAGAATGAGCTCCAGATGGAG 1245
Query 1114 ------------------------------------------------------ 1113
Sbjct 1246 GAATACCTGAAACAGAAGCTGCAAGATGAAGCTTATCAGGTCAGCTTGCAAGGT 1299
