Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00464
- Subject:
- NM_001285807.1
- Aligned Length:
- 2238
- Identities:
- 1028
- Gaps:
- 1125
Alignment
Query 1 ATGATTGAAGATAGTGGGAAAAGAGGAAATACCATGGCAGAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCA 74
|||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATTGAAGATAGTGGAAAAAGAGGAAACACCATGGCAGAAAGAAGACAGCTGTTTGCAGAGATGAGGGCTCA 74
Query 75 AGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTTAGGTTTGTTCAGAAGAAATGCAATT 148
||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||.||||||||||||||||
Sbjct 75 AGATCTGGATCGCATCCGACTCTCCACCTACAGAACAGCATGCAAGCTGAGATTTGTGCAGAAGAAATGCAATT 148
Query 149 TGCACCTGGTGGACATATGGAATGTCATAGAAGCATTGCGGGAAAATGCTCTGAACAACCTGGACCCAAACACT 222
||||||||||||||||.|||||.|||||.|||||||||||.|||||.|||.||||.||||||||||||||||..
Sbjct 149 TGCACCTGGTGGACATTTGGAACGTCATTGAAGCATTGCGCGAAAACGCTTTGAATAACCTGGACCCAAACATA 222
Query 223 GAACTCAACGTGTCCCGCTTAGAGGCTGTGCTCTCCACTATTTTTTACCAGCTCAACAAACGGATGCCAACCAC 296
||||||||||||.|||||.|.|||||.||||||||||||||||||||||||||||||||..|||||||||||||
Sbjct 223 GAACTCAACGTGGCCCGCCTGGAGGCGGTGCTCTCCACTATTTTTTACCAGCTCAACAAGAGGATGCCAACCAC 296
Query 297 TCACCAAATCCATGTGGAGCAGTCCATCAGCCTCCTCCTTAACTTCCTGCTTGCAGCGTTTGATCCGGAAGGCC 370
||||||||||||.|||||||||||||||||.|||||.||.|||||||||||.|||||.|||||.||||||||||
Sbjct 297 TCACCAAATCCACGTGGAGCAGTCCATCAGTCTCCTGCTGAACTTCCTGCTCGCAGCCTTTGACCCGGAAGGCC 370
Query 371 ATGGTAAAATTTCAGTATTTGCTGTCAAAATGGCTTTAGCCACATTGTGTGGAGGGAAGATCATGGACAAATTA 444
||||.|||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||.|||
Sbjct 371 ATGGAAAAATCTCAGTATTTGCTGTCAAAATGGCTTTGGCTACATTGTGTGGAGGAAAGATCATGGACAAGTTA 444
Query 445 AGATATATTTTCTCAATGATTTCTGACTCCAGTGGGGTGATGGTTTATGGACGATATGACCAATTCCTTCGGGA 518
||||||||||||||||||||.||||||||||||||.||||||||.||||||.||||||||||||||||||||||
Sbjct 445 AGATATATTTTCTCAATGATCTCTGACTCCAGTGGAGTGATGGTATATGGAAGATATGACCAATTCCTTCGGGA 518
Query 519 AGTTCTCAAACTACCCACGGCAGTTTTTGAAGGTCCTTCATTTGGTTACACAGAACAGTCAGCCAGATCCTGTT 592
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGTTCTCAAACTACCCACAGCAGTTTTTGAAGGTCCTTCATTTGGTTACACAGAACAGTCAGCCAGATCCTGTT 592
Query 593 TCTCCCAACAGAAAAAAGTCACGTTAAATGGTTTCTTGGACACGCTTATGTCAGATCCTCCCCCGCAGTGTCTG 666
||||||||||||||||.|||||.||||||||.||||||||||||||.||||||||.|||||.||.|||||.|||
Sbjct 593 TCTCCCAACAGAAAAAGGTCACCTTAAATGGCTTCTTGGACACGCTCATGTCAGACCCTCCTCCACAGTGCCTG 666
Query 667 GTCTGGTTGCCTCTTCTGCATCGACTAGCAAATGTGGAAAATGTCTTCCATCCGGTTGAGTGTTCCTACTGCCA 740
||.|||.|||||||||||||.|||||.||||||||.|||||||||||||||||.|||||||||||||||||.||
Sbjct 667 GTATGGCTGCCTCTTCTGCACCGACTGGCAAATGTAGAAAATGTCTTCCATCCAGTTGAGTGTTCCTACTGTCA 740
Query 741 CAGTGAGAGTATGATGGGATTTCGCTACCGATGCCAACAGTGTCACAATTACCAGCTCTGTCAGGACTGCTTCT 814
|||||||||.||||||||||||||.||||||||.||||||||||||||.||||||||.||.|||||||||||||
Sbjct 741 CAGTGAGAGCATGATGGGATTTCGATACCGATGTCAACAGTGTCACAACTACCAGCTTTGCCAGGACTGCTTCT 814
Query 815 GGAGGGGACATGCCGGTGGTTCTCATAGCAACCAGCACCAAATGAAAGAGTACACGTCATGGAAATCACCTGCT 888
|||||||.|||||.||.|||||||||||||||||||||||||||||.|||||.|||||.|||||||||||||||
Sbjct 815 GGAGGGGCCATGCAGGAGGTTCTCATAGCAACCAGCACCAAATGAAGGAGTATACGTCGTGGAAATCACCTGCT 888
Query 889 AAGAAGCTGACTAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCC 962
||||||||.||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 889 AAGAAGCTAACGAATGCATTAAGCAAGTCCCTGAGCTGTGCTTCAAGCCGTGAACCTTTGCACCCCATGTTCCC 962
Query 963 AGATCAGCCTGAGAAGCCACTCAACTTGGCTCACATCGTGCCTCCCAGACCTGTAACCAGCATGAACGACACCC 1036
|||.||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|
Sbjct 963 AGACCAGCCTGAAAAGCCACTCAACTTGGCTCACATCGTGCCTCCGAGACCTGTAACCAGCATGAACGACACAC 1036
Query 1037 TGTTCTCCCACTCTGTTCCCTCCTCAGGAAGTCCTTTTATTACCAGGAGCTC---------GGACGGTGCTTT- 1100
|.||.||||||||||||||||||||||||||||||||.||.||||||||||| ||||.|||...|
Sbjct 1037 TCTTTTCCCACTCTGTTCCCTCCTCAGGAAGTCCTTTCATCACCAGGAGCTCTCCTCCCAAGGACAGTGAAGTA 1110
Query 1101 -------------TGGTGGATGCGTC------------------------------------------------ 1113
||.|||.|..|.|
Sbjct 1111 GAACAGAACAAAATGCTGGCTAGGGCTGCTCCCGCCTTTCTGAAGGGCAGAGGGATACAGTACAGCCTGAATGT 1184
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1185 GGCAGACAGGCTAGCTGATGAACATGTTCTCATTGGGTTGTATGTCAACATGCTCCGGAACAACCCACCATGTA 1258
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1259 TGCTTGAGAGTTCAAACCGGCTTGATGAAGAACACAGGCTGATCGCCAGGTACGCCGCACGACTGGCAGCAGAA 1332
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1333 TCCTCCTCATCACAGCCCACACAGCAGAGGAGTGCCCCTGACATCTCCTTCACCATCGATGCAAATAAACAGCA 1406
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1407 AAGGCAGCTGATTGCAGAGCTAGAGAACAAGAACAGAGAAATCTTACAAGAGATTCAGAGACTTCGGGTAGAAC 1480
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1481 ATGAGCAAGCTTCCCAGCCCACGCCAGAGAAAGCTCAGCAGAACCCAACCTTGCTGGCAGAACTCCGGCTCCTC 1554
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1555 AGACAGCGAAAGGATGAGCTAGAACAGAGAATGTCTGCTCTCCAGGAGAGCCGGAGAGAGCTGATGGTCCAGTT 1628
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1629 GGAAGGTCTCATGAAGCTCCTGAAGGAAGAAGAACTGAAGCAGGGAACCCAGGGGGCAAGCTCCCCACGCTCTT 1702
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1703 CCCCCAGCCACACCATCAGCAGGCCGATCCCCATGCCCATCCGTTCAGCATCTGCCTGTCCCACACCAACGCAC 1776
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1777 ACCCCGCAGGACTCCCTCACTGGGGTAGGCGGAGATGTGCAAGAGGCGTTTGCACAAAGTTCGAGAAGGAATCT 1850
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1851 AAGGAGTGACCTGCTGGTGGCTGCAGACTCCATCACCAATACCATGTCCTCTCTGGTGAAGGAGCTGAATTCAG 1924
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1925 AGGTGGCGAGTGAAACAGAAAGTACTGTGGATTCCGAGTTCTCGAGACCTCAGTTTGAGGATCTGGCTCCATCA 1998
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 1999 CCGACCTCTGAGAAGGCTTTTCTAGCCCAAATCCACTCCCGGAAACCTGGGTACATTCACGGTGGAGCTGCAAG 2072
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 2073 TACCACGCATGGTGACATGGTCCCGGAAGATGGGGATCCTTACACGCAACCCGAGGATGGCAATTATGAGAACG 2146
Query 1114 -------------------------------------------------------------------------- 1113
Sbjct 2147 AGTCTGTGCGGCAGCTGGAGAATGAGCTGCAGCTGGAGGAGTACCTGAAGCAGAAGCTGCAGGACGAGGCCTAC 2220
Query 1114 ------------------ 1113
Sbjct 2221 CAGGTCAGCTTGCAAGGT 2238
