Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00507
- Subject:
- XR_002956610.1
- Aligned Length:
- 2706
- Identities:
- 1170
- Gaps:
- 1536
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGATGCGCCGAGGGATGGAGGTGTATGTCACCGAGGAGGCTGCTGCGCTCCTGCCCCACGCCCTGGGCCCTTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTGGAGAGTCACCGCCGAGGGATGAGGACGCGCCAGCCCGGGGGAACGCGCCAGCTGCTTTCGCGGCCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCGCGCAGCGCCCAGCAGCCGCGCCGAGCCTGACACGCTGTCCTCTCCCCTCGCGCACAGGGCTCTGCGAGTG 222
Query 1 -------------------------ATGGAACGGCTGCAGAAGCAACCACTTACCTCCCCCGGGAGCGTGAGCC 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACCCGGCGGGCGAGCTCCGTGCTGCATGGAACGGCTGCAGAAGCAACCACTTACCTCCCCCGGGAGCGTGAGCC 296
Query 50 CCTCCCGAGATTCCAGTGTGCCTGGCTCTCCCTCCAGCATCGTGGCCAAGATGGACAATCAGGTGCTGGGCTAC 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCTCCCGAGATTCCAGTGTGCCTGGCTCTCCCTCCAGCATCGTGGCCAAGATGGACAATCAGGTGCTGGGCTAC 370
Query 124 AAGGACCTGGCTGCCATCCCCAAGGACAAGGCCATCCTGGACATCGAGCGGCCCGACCTCATGATCTACGAGCC 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGGACCTGGCTGCCATCCCCAAGGACAAGGCCATCCTGGACATCGAGCGGCCCGACCTCATGATCTACGAGCC 444
Query 198 TCACTTCACTTATTCCCTCCTGGAACACGTGGAGCTGCCTCGCAGCCGCGAGCGCTCGCTGTCACCCAAATCCA 271
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCACTTCACTTATTCCCTCCTGGAACACGTGGAGCTGCCTCGCAGCCGC------------------------- 493
Query 272 CATCCCCCCCACCATCCCCAGAGGTGTGGGCGGACAGCCGGTCGCCTGGAATCATCTCTCAGGCCTCGGCCCCC 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 494 --------------------GAGGTGTGGGCGGACAGCCGGTCGCCTGGAATCATCTCTCAGGCCTCGGCCCCC 547
Query 346 AGAACCACTGGAACCCCCCGGACCAGCCTGCCCCATTTCCACCACCCTGAGACCTCCCGCCCAGATTCCAACAT 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 548 AGAACCACTGGAACCCCCCGGACCAGCCTGCCCCATTTCCACCACCCTGAGACCTCCCGCCCAGATTCCAACAT 621
Query 420 CTACAAGAAGCCTCCCATCTATAAGCAGAGAGAGTCCGTGGGAGGCAGCCCTCAGACCAAGCACCTCATCGAGG 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 622 CTACAAGAAGCCTCCCATCTATAAGCAGAGAGAGTCCGTGGGAGGCAGCCCTCAGACCAAGCACCTCATCGAGG 695
Query 494 ATCTCATCATCGAGTCATCCAAGTTTCCTGCAGCCCAGCCCCCAGACCCCAACCAGCCAGCCAAAATCGAAACC 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 696 ATCTCATCATCGAGTCATCCAAGTTTCCTGCAGCCCAGCCCCCAGACCCCAACCAGCCAGCCAAAATCGAAACC 769
Query 568 GACTACTGGCCATGCCCCCCGTCTCTGGCTGTTGTGGAGACAGAATGGAGGAAGCGGAAGGCGTCTCGGAGGGG 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 770 GACTACTGGCCATGCCCCCCGTCTCTGGCTGTTGTGGAGACAGAATGGAGGAAGCGGAAGGCGTCTCGGAGGGG 843
Query 642 AGCAGAGGAAGAGGAGGAGGAGGAAGATGACGACTCTGGAGAGGAGATGAAGGCTCTCAGGGAGCGTCAGAGAG 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 844 AGCAGAGGAAGAGGAGGAGGAGGAAGATGACGACTCTGGAGAGGAGATGAAGGCTCTCAGGGAGCGTCAGAGAG 917
Query 716 AGGAACTCAGTAAGGTTACTTCCAACTTGGGAAAGATGATCTTGAAAGAAGAGATGGAAAAGTCATTGCCGATC 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 918 AGGAACTCAGTAAGGTTACTTCCAACTTGGGAAAGATGATCTTGAAAGAAGAGATGGAAAAGTCATTGCCGATC 991
Query 790 CGAAGGAAAACCCGCTCTCTGCCTGACCGGACACCCTTCCATACCTCCTTGCACCAGGGAACGTCTAAATCTTC 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 992 CGAAGGAAAACCCGCTCTCTGCCTGACCGGACACCCTTCCATACCTCCTTGCACCAGGGAACGTCTAAATCTTC 1065
Query 864 CTCTCTCCCCGCCTATGGCAGGACCACCCTGAGCCGGCTACAGTCCACAGAGTTCAGCCCATCAGGGAGTGAGA 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1066 CTCTCTCCCCGCCTATGGCAGGACCACCCTGAGCCGGCTACAGTCCACAGAGTTCAGCCCATCAGGGAGTGAGA 1139
Query 938 CTGGAAGCCCAGGCCTG--------------------------------------------------------- 954
|||||||||||||||||
Sbjct 1140 CTGGAAGCCCAGGCCTGCAGGTGAGTGCCTCCTGGAGGGGAACAGGCAGAGCAGCAGAAGCTGGGTCCTGGCAC 1213
Query 955 -------------------------------------------------------------------------- 954
Sbjct 1214 CCGAAAGTGTCAGGGGAAGGGGGGTGTGGGGCCACAGAGTTGCCTGGTGAAGAAGAAGAAGCCGGGGTAAGGCT 1287
Query 955 ------------------------------------------------CAGAACGGAGAGGGCCAGAGGGGGAG 980
||||||||||||||||||||||||||
Sbjct 1288 GGGAAGGTCTCCCTGCCCCGCTCTGGCTCACTGCGGCTTTGGTCTCCCCAGAACGGAGAGGGCCAGAGGGGGAG 1361
Query 981 GATGGACCGGGGGAACTCCCTGCCCTGTGTGCTGGAGCAGAAGATCTATCCCTATGAAATGCTAGTGGTGACCA 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1362 GATGGACCGGGGGAACTCCCTGCCCTGTGTGCTGGAGCAGAAGATCTATCCCTATGAAATGCTAGTGGTGACCA 1435
Query 1055 ACAAGGGGCGAACCAAGCTGCCACCGGGGGTGGATCGGATGCGGCTTGAGAGGCATCTGTCTGCCGAGGACTTC 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1436 ACAAGGGGCGAACCAAGCTGCCACCGGGGGTGGATCGGATGCGGCTTGAGAGGCATCTGTCTGCCGAGGACTTC 1509
Query 1129 TCAAGGGTATTTGCCATGTCCCCTGAAGAGTTTGGCAAGCTGGCTCTGTGGAAGCGGAATGAGCTCAAGAAGAA 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1510 TCAAGGGTATTTGCCATGTCCCCTGAAGAGTTTGGCAAGCTGGCTCTGTGGAAGCGGAATGAGCTCAAGAAGAA 1583
Query 1203 GGCCTCTCTCTTC------------------------------------------------------------- 1215
|||||||||||||
Sbjct 1584 GGCCTCTCTCTTCTGATGGCCCCCACCTGCTCCGGGACGGCCCCCTTACCCCTGCTGCTTCAGGGTTTTTCCCC 1657
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 1658 GGCGGGTTGGGAGGGGCAGGAGGTGGGGTGGAAATAGGGTGGGCTCCTTTCCTCAGGTAGAGTGGGGGGCCAAA 1731
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 1732 ACCTCTGCAGTCCCCGGCAGTGAGCTATGGACTTTCTTCCCCCTCACAAGGCTGGGGGCCTCCTGCTCTCGTCC 1805
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 1806 CTGGCCCTCCCTGCACAGGGCAAAGCCAGTCTGGGCTCTGGCACACAGAGTTCATGTTTGCGCCCTCTCCCTGC 1879
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 1880 CCCTCACCCCAGAGGGTGAGGAGGAATGAGGGGCATTGGTGGTTAGGCCGGTTGGCTGTCTTGAACAGCTGGAG 1953
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 1954 GGAAGATGCAGGGGTGGGAAGCGGCCAGGCAGAAAGAGCTCCAGGCTCTTGTGTCGCCCACCCAGCCCTCCCAT 2027
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2028 ACTCACTCCTGACAGCTTTCCTGCACTGCAGCCTCCTGCTCCTCTGACTCTAGTGGGAACAGGCCCCAGCTCAG 2101
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2102 CCTCCGGCAGGGAGGTCACCCCTCCACTTCAGCTTGCCCTGACCTCCGCTCGCAAACCCCGAGCTTCCAAGCCT 2175
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2176 TTTGCTCCAGCCCTGCGGCTTCCCCAGAAGCCTGGGCTTAGGGTGGAGATGCCGCCTACACACGATCCTGGCCC 2249
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2250 TCCACCTGCCTCCAGGCCACGAAATGGGAATTCCAGCACTAAGCCAGGCACCGGGCAGAAGCTGGGCCTTCCGC 2323
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2324 CTCCCTTGGATGGGGTCAAGAGGCCAGGCCTGGCACATTTTGGAGTGTCCTGGCTACCAGCTCTCACCTACACC 2397
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2398 CACGCACCCCCCCACACACTATGCTCTCTCAAGAATGTAATTTATTGGGGCCCCCCCAGCTGCTTTCCTCACCT 2471
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2472 GCCCCTGCCCTACCTTACACCCCCAGCTTGACTTCTTTCCAGTCCACGTGTGTATATAATGATATCTATATTTT 2545
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2546 TGCCCAGGTCTGGGTATTGCTCCTGCCCAGACCCTGACATCCCTTTCCACTGTGTGTGTGACCATGCTGGGGGA 2619
Query 1216 ------------------------------------------ 1215
Sbjct 2620 GGGGGACTCTGCTTGGAATTAAAAGGTTGCATTGGGTCCCTA 2661
