Construct: ORF ccsbBroadEn_00507
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF005112.1_s300c1, BRDN0000397983
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- DMTN (2039)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
---|---|---|---|---|---|---|---|---|
1 | human | 2039 | DMTN | dematin actin binding protein | NM_001114135.5 | 100% | 100% | |
2 | human | 2039 | DMTN | dematin actin binding protein | NM_001114136.3 | 100% | 100% | |
3 | human | 2039 | DMTN | dematin actin binding protein | NM_001323378.2 | 100% | 100% | |
4 | human | 2039 | DMTN | dematin actin binding protein | NM_001323379.2 | 100% | 100% | |
5 | human | 2039 | DMTN | dematin actin binding protein | NM_001323380.2 | 100% | 100% | |
6 | human | 2039 | DMTN | dematin actin binding protein | NM_001323381.2 | 100% | 100% | |
7 | human | 2039 | DMTN | dematin actin binding protein | NM_001323382.2 | 100% | 100% | |
8 | human | 2039 | DMTN | dematin actin binding protein | NM_001978.5 | 100% | 100% | |
9 | human | 2039 | DMTN | dematin actin binding protein | NM_001323389.2 | 96.2% | 96.2% | 246_247ins45 |
10 | human | 2039 | DMTN | dematin actin binding protein | NM_001323390.2 | 96.2% | 96.2% | 246_247ins45 |
11 | human | 2039 | DMTN | dematin actin binding protein | XM_011544435.1 | 96.2% | 96.2% | 246_247ins45 |
12 | human | 2039 | DMTN | dematin actin binding protein | NM_001114137.3 | 94.5% | 94.5% | 955_956ins66 |
13 | human | 2039 | DMTN | dematin actin binding protein | NM_001114138.3 | 94.5% | 94.5% | 955_956ins66 |
14 | human | 2039 | DMTN | dematin actin binding protein | NM_001302816.3 | 94.5% | 94.5% | 955_956ins66 |
15 | human | 2039 | DMTN | dematin actin binding protein | NM_001323383.2 | 94.5% | 94.5% | 955_956ins66 |
16 | human | 2039 | DMTN | dematin actin binding protein | NM_001323384.2 | 94.5% | 94.5% | 955_956ins66 |
17 | human | 2039 | DMTN | dematin actin binding protein | NM_001323385.2 | 94.5% | 94.5% | 955_956ins66 |
18 | human | 2039 | DMTN | dematin actin binding protein | XM_017013189.1 | 94.5% | 94.5% | 955_956ins66 |
19 | human | 2039 | DMTN | dematin actin binding protein | NM_001323391.2 | 93.8% | 93.8% | 17_18ins75 |
20 | human | 2039 | DMTN | dematin actin binding protein | NM_001323392.2 | 93.8% | 93.8% | 17_18ins75 |
21 | human | 2039 | DMTN | dematin actin binding protein | NM_001323393.2 | 93.8% | 93.8% | 17_18ins75 |
22 | human | 2039 | DMTN | dematin actin binding protein | NM_001323394.2 | 93.8% | 93.8% | 17_18ins75 |
23 | human | 2039 | DMTN | dematin actin binding protein | NM_001323395.2 | 93.8% | 93.8% | 17_18ins75 |
24 | human | 2039 | DMTN | dematin actin binding protein | NM_001323396.2 | 93.8% | 93.8% | 17_18ins75 |
25 | human | 2039 | DMTN | dematin actin binding protein | NM_001323397.2 | 93.8% | 93.8% | 17_18ins75 |
26 | human | 2039 | DMTN | dematin actin binding protein | XM_017013190.1 | 90.8% | 90.8% | 246_247ins45;910_911ins66 |
27 | human | 2039 | DMTN | dematin actin binding protein | XM_017013191.1 | 90.8% | 90.8% | 246_247ins45;910_911ins66 |
28 | human | 2039 | DMTN | dematin actin binding protein | XM_017013192.1 | 90.8% | 90.8% | 246_247ins45;910_911ins66 |
29 | human | 2039 | DMTN | dematin actin binding protein | NM_001302817.3 | 90.1% | 90.1% | 17_18ins75;171_172ins45 |
30 | human | 2039 | DMTN | dematin actin binding protein | NM_001323388.2 | 90.1% | 90.1% | 17_18ins75;171_172ins45 |
31 | human | 2039 | DMTN | dematin actin binding protein | XM_017013193.1 | 90.1% | 90.1% | 17_18ins75;171_172ins45 |
32 | human | 2039 | DMTN | dematin actin binding protein | XM_017013194.1 | 90.1% | 90.1% | 17_18ins75;171_172ins45 |
33 | human | 2039 | DMTN | dematin actin binding protein | NM_001114139.4 | 88.3% | 88.3% | 17_18ins75;880_881ins66 |
34 | human | 2039 | DMTN | dematin actin binding protein | NM_001323387.2 | 88.3% | 88.3% | 17_18ins75;880_881ins66 |
35 | human | 2039 | DMTN | dematin actin binding protein | XM_017013195.1 | 88.3% | 88.3% | 17_18ins75;880_881ins66 |
36 | human | 2039 | DMTN | dematin actin binding protein | XM_017013196.2 | 88.3% | 88.3% | 17_18ins75;880_881ins66 |
37 | human | 2039 | DMTN | dematin actin binding protein | XM_017013197.1 | 88.3% | 88.3% | 17_18ins75;880_881ins66 |
38 | human | 2039 | DMTN | dematin actin binding protein | XM_017013198.1 | 88.3% | 88.3% | 17_18ins75;880_881ins66 |
39 | human | 2039 | DMTN | dematin actin binding protein | NM_001323398.2 | 84.6% | 84.6% | 17_18ins75;171_172ins45;835_836ins66 |
40 | human | 2039 | DMTN | dematin actin binding protein | NM_001323399.2 | 84.6% | 84.6% | 17_18ins75;171_172ins45;835_836ins66 |
41 | human | 2039 | DMTN | dematin actin binding protein | NM_001323400.2 | 84.6% | 84.6% | 17_18ins75;171_172ins45;835_836ins66 |
42 | human | 2039 | DMTN | dematin actin binding protein | NM_001323401.2 | 84.6% | 84.6% | 17_18ins75;171_172ins45;835_836ins66 |
43 | human | 2039 | DMTN | dematin actin binding protein | XR_002956606.1 | 47.2% | 1_114del;1069_1247del;1509_2573del | |
44 | human | 2039 | DMTN | dematin actin binding protein | XR_002956614.1 | 46.8% | (many diffs) | |
45 | human | 2039 | DMTN | dematin actin binding protein | XR_002956616.1 | 46.7% | (many diffs) | |
46 | human | 2039 | DMTN | dematin actin binding protein | XR_002956615.1 | 45.9% | (many diffs) | |
47 | human | 2039 | DMTN | dematin actin binding protein | XR_002956607.1 | 45.9% | 1_187del;1142_1320del;1582_2646del | |
48 | human | 2039 | DMTN | dematin actin binding protein | XR_002956608.1 | 45.7% | 1_196del;1151_1329del;1591_2655del | |
49 | human | 2039 | DMTN | dematin actin binding protein | XR_002956611.1 | 45.2% | (many diffs) | |
50 | human | 2039 | DMTN | dematin actin binding protein | XR_002956612.1 | 44.9% | (many diffs) | |
51 | human | 2039 | DMTN | dematin actin binding protein | XR_002956619.1 | 44.9% | (many diffs) | |
52 | human | 2039 | DMTN | dematin actin binding protein | XR_002956605.1 | 44.6% | 1_261del;1216_1394del;1656_2720del | |
53 | human | 2039 | DMTN | dematin actin binding protein | XR_002956620.1 | 44.2% | (many diffs) | |
54 | human | 2039 | DMTN | dematin actin binding protein | XR_002956617.1 | 43.2% | (many diffs) | |
55 | human | 2039 | DMTN | dematin actin binding protein | XR_002956610.1 | 43.2% | (many diffs) | |
56 | human | 2039 | DMTN | dematin actin binding protein | XR_002956604.1 | 41.1% | 1_493del;1448_1626del;1888_2952del | |
57 | human | 2039 | DMTN | dematin actin binding protein | XR_002956613.1 | 40.7% | (many diffs) | |
58 | human | 2039 | DMTN | dematin actin binding protein | XR_002956609.1 | 39.6% | (many diffs) | |
59 | mouse | 13829 | Dmtn | dematin actin binding protein | NM_001252662.1 | 89.9% | 96% | (many diffs) |
60 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518530.3 | 89.9% | 96% | (many diffs) |
61 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518531.2 | 89.9% | 96% | (many diffs) |
62 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518532.2 | 89.9% | 96% | (many diffs) |
63 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_017315838.1 | 89.9% | 96% | (many diffs) |
64 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518522.2 | 85.9% | 91.7% | (many diffs) |
65 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518523.3 | 85.9% | 91.7% | (many diffs) |
66 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518525.3 | 85.9% | 91.7% | (many diffs) |
67 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518526.2 | 85.9% | 91.7% | (many diffs) |
68 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518527.2 | 85.9% | 91.7% | (many diffs) |
69 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_011244949.2 | 85.9% | 91.7% | (many diffs) |
70 | mouse | 13829 | Dmtn | dematin actin binding protein | NM_001252663.1 | 84.6% | 90.6% | (many diffs) |
71 | mouse | 13829 | Dmtn | dematin actin binding protein | NM_013514.4 | 84.6% | 90.6% | (many diffs) |
72 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_017315839.1 | 84.6% | 90.6% | (many diffs) |
73 | mouse | 13829 | Dmtn | dematin actin binding protein | NM_001252664.1 | 84.3% | 90.1% | (many diffs) |
74 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518539.2 | 84.3% | 90.1% | (many diffs) |
75 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518540.3 | 84.3% | 90.1% | (many diffs) |
76 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518541.2 | 84.3% | 90.1% | (many diffs) |
77 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_011244950.2 | 80.8% | 86.5% | (many diffs) |
78 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518533.3 | 80.5% | 86% | (many diffs) |
79 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518534.2 | 80.5% | 86% | (many diffs) |
80 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518535.3 | 80.5% | 86% | (many diffs) |
81 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518536.2 | 80.5% | 86% | (many diffs) |
82 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518537.2 | 80.5% | 86% | (many diffs) |
83 | mouse | 13829 | Dmtn | dematin actin binding protein | NM_001252665.1 | 79% | 84.6% | (many diffs) |
84 | mouse | 13829 | Dmtn | dematin actin binding protein | NM_001252666.1 | 79% | 84.6% | (many diffs) |
85 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_006518542.3 | 79% | 84.6% | (many diffs) |
86 | mouse | 13829 | Dmtn | dematin actin binding protein | XM_017315840.1 | 79% | 84.6% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 1281
- ORF length:
- 1215
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG 61 TTGGCATGGA ACGGCTGCAG AAGCAACCAC TTACCTCCCC CGGGAGCGTG AGCCCCTCCC 121 GAGATTCCAG TGTGCCTGGC TCTCCCTCCA GCATCGTGGC CAAGATGGAC AATCAGGTGC 181 TGGGCTACAA GGACCTGGCT GCCATCCCCA AGGACAAGGC CATCCTGGAC ATCGAGCGGC 241 CCGACCTCAT GATCTACGAG CCTCACTTCA CTTATTCCCT CCTGGAACAC GTGGAGCTGC 301 CTCGCAGCCG CGAGCGCTCG CTGTCACCCA AATCCACATC CCCCCCACCA TCCCCAGAGG 361 TGTGGGCGGA CAGCCGGTCG CCTGGAATCA TCTCTCAGGC CTCGGCCCCC AGAACCACTG 421 GAACCCCCCG GACCAGCCTG CCCCATTTCC ACCACCCTGA GACCTCCCGC CCAGATTCCA 481 ACATCTACAA GAAGCCTCCC ATCTATAAGC AGAGAGAGTC CGTGGGAGGC AGCCCTCAGA 541 CCAAGCACCT CATCGAGGAT CTCATCATCG AGTCATCCAA GTTTCCTGCA GCCCAGCCCC 601 CAGACCCCAA CCAGCCAGCC AAAATCGAAA CCGACTACTG GCCATGCCCC CCGTCTCTGG 661 CTGTTGTGGA GACAGAATGG AGGAAGCGGA AGGCGTCTCG GAGGGGAGCA GAGGAAGAGG 721 AGGAGGAGGA AGATGACGAC TCTGGAGAGG AGATGAAGGC TCTCAGGGAG CGTCAGAGAG 781 AGGAACTCAG TAAGGTTACT TCCAACTTGG GAAAGATGAT CTTGAAAGAA GAGATGGAAA 841 AGTCATTGCC GATCCGAAGG AAAACCCGCT CTCTGCCTGA CCGGACACCC TTCCATACCT 901 CCTTGCACCA GGGAACGTCT AAATCTTCCT CTCTCCCCGC CTATGGCAGG ACCACCCTGA 961 GCCGGCTACA GTCCACAGAG TTCAGCCCAT CAGGGAGTGA GACTGGAAGC CCAGGCCTGC 1021 AGAACGGAGA GGGCCAGAGG GGGAGGATGG ACCGGGGGAA CTCCCTGCCC TGTGTGCTGG 1081 AGCAGAAGAT CTATCCCTAT GAAATGCTAG TGGTGACCAA CAAGGGGCGA ACCAAGCTGC 1141 CACCGGGGGT GGATCGGATG CGGCTTGAGA GGCATCTGTC TGCCGAGGAC TTCTCAAGGG 1201 TATTTGCCAT GTCCCCTGAA GAGTTTGGCA AGCTGGCTCT GTGGAAGCGG AATGAGCTCA 1261 AGAAGAAGGC CTCTCTCTTC TGTCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc 1321 attgcttatc aatttgttgc aacgaac