Construct: ORF ccsbBroadEn_00507

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005112.1_s300c1, BRDN0000397983
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DMTN (2039)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2039 DMTN dematin actin binding protein NM_001114135.5 100% 100%
2 human 2039 DMTN dematin actin binding protein NM_001114136.3 100% 100%
3 human 2039 DMTN dematin actin binding protein NM_001323378.2 100% 100%
4 human 2039 DMTN dematin actin binding protein NM_001323379.2 100% 100%
5 human 2039 DMTN dematin actin binding protein NM_001323380.2 100% 100%
6 human 2039 DMTN dematin actin binding protein NM_001323381.2 100% 100%
7 human 2039 DMTN dematin actin binding protein NM_001323382.2 100% 100%
8 human 2039 DMTN dematin actin binding protein NM_001978.5 100% 100%
9 human 2039 DMTN dematin actin binding protein NM_001323389.2 96.2% 96.2% 246_247ins45
10 human 2039 DMTN dematin actin binding protein NM_001323390.2 96.2% 96.2% 246_247ins45
11 human 2039 DMTN dematin actin binding protein XM_011544435.1 96.2% 96.2% 246_247ins45
12 human 2039 DMTN dematin actin binding protein NM_001114137.3 94.5% 94.5% 955_956ins66
13 human 2039 DMTN dematin actin binding protein NM_001114138.3 94.5% 94.5% 955_956ins66
14 human 2039 DMTN dematin actin binding protein NM_001302816.3 94.5% 94.5% 955_956ins66
15 human 2039 DMTN dematin actin binding protein NM_001323383.2 94.5% 94.5% 955_956ins66
16 human 2039 DMTN dematin actin binding protein NM_001323384.2 94.5% 94.5% 955_956ins66
17 human 2039 DMTN dematin actin binding protein NM_001323385.2 94.5% 94.5% 955_956ins66
18 human 2039 DMTN dematin actin binding protein XM_017013189.1 94.5% 94.5% 955_956ins66
19 human 2039 DMTN dematin actin binding protein NM_001323391.2 93.8% 93.8% 17_18ins75
20 human 2039 DMTN dematin actin binding protein NM_001323392.2 93.8% 93.8% 17_18ins75
21 human 2039 DMTN dematin actin binding protein NM_001323393.2 93.8% 93.8% 17_18ins75
22 human 2039 DMTN dematin actin binding protein NM_001323394.2 93.8% 93.8% 17_18ins75
23 human 2039 DMTN dematin actin binding protein NM_001323395.2 93.8% 93.8% 17_18ins75
24 human 2039 DMTN dematin actin binding protein NM_001323396.2 93.8% 93.8% 17_18ins75
25 human 2039 DMTN dematin actin binding protein NM_001323397.2 93.8% 93.8% 17_18ins75
26 human 2039 DMTN dematin actin binding protein XM_017013190.1 90.8% 90.8% 246_247ins45;910_911ins66
27 human 2039 DMTN dematin actin binding protein XM_017013191.1 90.8% 90.8% 246_247ins45;910_911ins66
28 human 2039 DMTN dematin actin binding protein XM_017013192.1 90.8% 90.8% 246_247ins45;910_911ins66
29 human 2039 DMTN dematin actin binding protein NM_001302817.3 90.1% 90.1% 17_18ins75;171_172ins45
30 human 2039 DMTN dematin actin binding protein NM_001323388.2 90.1% 90.1% 17_18ins75;171_172ins45
31 human 2039 DMTN dematin actin binding protein XM_017013193.1 90.1% 90.1% 17_18ins75;171_172ins45
32 human 2039 DMTN dematin actin binding protein XM_017013194.1 90.1% 90.1% 17_18ins75;171_172ins45
33 human 2039 DMTN dematin actin binding protein NM_001114139.4 88.3% 88.3% 17_18ins75;880_881ins66
34 human 2039 DMTN dematin actin binding protein NM_001323387.2 88.3% 88.3% 17_18ins75;880_881ins66
35 human 2039 DMTN dematin actin binding protein XM_017013195.1 88.3% 88.3% 17_18ins75;880_881ins66
36 human 2039 DMTN dematin actin binding protein XM_017013196.2 88.3% 88.3% 17_18ins75;880_881ins66
37 human 2039 DMTN dematin actin binding protein XM_017013197.1 88.3% 88.3% 17_18ins75;880_881ins66
38 human 2039 DMTN dematin actin binding protein XM_017013198.1 88.3% 88.3% 17_18ins75;880_881ins66
39 human 2039 DMTN dematin actin binding protein NM_001323398.2 84.6% 84.6% 17_18ins75;171_172ins45;835_836ins66
40 human 2039 DMTN dematin actin binding protein NM_001323399.2 84.6% 84.6% 17_18ins75;171_172ins45;835_836ins66
41 human 2039 DMTN dematin actin binding protein NM_001323400.2 84.6% 84.6% 17_18ins75;171_172ins45;835_836ins66
42 human 2039 DMTN dematin actin binding protein NM_001323401.2 84.6% 84.6% 17_18ins75;171_172ins45;835_836ins66
43 human 2039 DMTN dematin actin binding protein XR_002956606.1 47.2% 1_114del;1069_1247del;1509_2573del
44 human 2039 DMTN dematin actin binding protein XR_002956614.1 46.8% (many diffs)
45 human 2039 DMTN dematin actin binding protein XR_002956616.1 46.7% (many diffs)
46 human 2039 DMTN dematin actin binding protein XR_002956615.1 45.9% (many diffs)
47 human 2039 DMTN dematin actin binding protein XR_002956607.1 45.9% 1_187del;1142_1320del;1582_2646del
48 human 2039 DMTN dematin actin binding protein XR_002956608.1 45.7% 1_196del;1151_1329del;1591_2655del
49 human 2039 DMTN dematin actin binding protein XR_002956611.1 45.2% (many diffs)
50 human 2039 DMTN dematin actin binding protein XR_002956612.1 44.9% (many diffs)
51 human 2039 DMTN dematin actin binding protein XR_002956619.1 44.9% (many diffs)
52 human 2039 DMTN dematin actin binding protein XR_002956605.1 44.6% 1_261del;1216_1394del;1656_2720del
53 human 2039 DMTN dematin actin binding protein XR_002956620.1 44.2% (many diffs)
54 human 2039 DMTN dematin actin binding protein XR_002956617.1 43.2% (many diffs)
55 human 2039 DMTN dematin actin binding protein XR_002956610.1 43.2% (many diffs)
56 human 2039 DMTN dematin actin binding protein XR_002956604.1 41.1% 1_493del;1448_1626del;1888_2952del
57 human 2039 DMTN dematin actin binding protein XR_002956613.1 40.7% (many diffs)
58 human 2039 DMTN dematin actin binding protein XR_002956609.1 39.6% (many diffs)
59 mouse 13829 Dmtn dematin actin binding protein NM_001252662.1 89.9% 96% (many diffs)
60 mouse 13829 Dmtn dematin actin binding protein XM_006518530.3 89.9% 96% (many diffs)
61 mouse 13829 Dmtn dematin actin binding protein XM_006518531.2 89.9% 96% (many diffs)
62 mouse 13829 Dmtn dematin actin binding protein XM_006518532.2 89.9% 96% (many diffs)
63 mouse 13829 Dmtn dematin actin binding protein XM_017315838.1 89.9% 96% (many diffs)
64 mouse 13829 Dmtn dematin actin binding protein XM_006518522.2 85.9% 91.7% (many diffs)
65 mouse 13829 Dmtn dematin actin binding protein XM_006518523.3 85.9% 91.7% (many diffs)
66 mouse 13829 Dmtn dematin actin binding protein XM_006518525.3 85.9% 91.7% (many diffs)
67 mouse 13829 Dmtn dematin actin binding protein XM_006518526.2 85.9% 91.7% (many diffs)
68 mouse 13829 Dmtn dematin actin binding protein XM_006518527.2 85.9% 91.7% (many diffs)
69 mouse 13829 Dmtn dematin actin binding protein XM_011244949.2 85.9% 91.7% (many diffs)
70 mouse 13829 Dmtn dematin actin binding protein NM_001252663.1 84.6% 90.6% (many diffs)
71 mouse 13829 Dmtn dematin actin binding protein NM_013514.4 84.6% 90.6% (many diffs)
72 mouse 13829 Dmtn dematin actin binding protein XM_017315839.1 84.6% 90.6% (many diffs)
73 mouse 13829 Dmtn dematin actin binding protein NM_001252664.1 84.3% 90.1% (many diffs)
74 mouse 13829 Dmtn dematin actin binding protein XM_006518539.2 84.3% 90.1% (many diffs)
75 mouse 13829 Dmtn dematin actin binding protein XM_006518540.3 84.3% 90.1% (many diffs)
76 mouse 13829 Dmtn dematin actin binding protein XM_006518541.2 84.3% 90.1% (many diffs)
77 mouse 13829 Dmtn dematin actin binding protein XM_011244950.2 80.8% 86.5% (many diffs)
78 mouse 13829 Dmtn dematin actin binding protein XM_006518533.3 80.5% 86% (many diffs)
79 mouse 13829 Dmtn dematin actin binding protein XM_006518534.2 80.5% 86% (many diffs)
80 mouse 13829 Dmtn dematin actin binding protein XM_006518535.3 80.5% 86% (many diffs)
81 mouse 13829 Dmtn dematin actin binding protein XM_006518536.2 80.5% 86% (many diffs)
82 mouse 13829 Dmtn dematin actin binding protein XM_006518537.2 80.5% 86% (many diffs)
83 mouse 13829 Dmtn dematin actin binding protein NM_001252665.1 79% 84.6% (many diffs)
84 mouse 13829 Dmtn dematin actin binding protein NM_001252666.1 79% 84.6% (many diffs)
85 mouse 13829 Dmtn dematin actin binding protein XM_006518542.3 79% 84.6% (many diffs)
86 mouse 13829 Dmtn dematin actin binding protein XM_017315840.1 79% 84.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1281
ORF length:
1215
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA ACGGCTGCAG AAGCAACCAC TTACCTCCCC CGGGAGCGTG AGCCCCTCCC
121GAGATTCCAG TGTGCCTGGC TCTCCCTCCA GCATCGTGGC CAAGATGGAC AATCAGGTGC
181TGGGCTACAA GGACCTGGCT GCCATCCCCA AGGACAAGGC CATCCTGGAC ATCGAGCGGC
241CCGACCTCAT GATCTACGAG CCTCACTTCA CTTATTCCCT CCTGGAACAC GTGGAGCTGC
301CTCGCAGCCG CGAGCGCTCG CTGTCACCCA AATCCACATC CCCCCCACCA TCCCCAGAGG
361TGTGGGCGGA CAGCCGGTCG CCTGGAATCA TCTCTCAGGC CTCGGCCCCC AGAACCACTG
421GAACCCCCCG GACCAGCCTG CCCCATTTCC ACCACCCTGA GACCTCCCGC CCAGATTCCA
481ACATCTACAA GAAGCCTCCC ATCTATAAGC AGAGAGAGTC CGTGGGAGGC AGCCCTCAGA
541CCAAGCACCT CATCGAGGAT CTCATCATCG AGTCATCCAA GTTTCCTGCA GCCCAGCCCC
601CAGACCCCAA CCAGCCAGCC AAAATCGAAA CCGACTACTG GCCATGCCCC CCGTCTCTGG
661CTGTTGTGGA GACAGAATGG AGGAAGCGGA AGGCGTCTCG GAGGGGAGCA GAGGAAGAGG
721AGGAGGAGGA AGATGACGAC TCTGGAGAGG AGATGAAGGC TCTCAGGGAG CGTCAGAGAG
781AGGAACTCAG TAAGGTTACT TCCAACTTGG GAAAGATGAT CTTGAAAGAA GAGATGGAAA
841AGTCATTGCC GATCCGAAGG AAAACCCGCT CTCTGCCTGA CCGGACACCC TTCCATACCT
901CCTTGCACCA GGGAACGTCT AAATCTTCCT CTCTCCCCGC CTATGGCAGG ACCACCCTGA
961GCCGGCTACA GTCCACAGAG TTCAGCCCAT CAGGGAGTGA GACTGGAAGC CCAGGCCTGC
1021AGAACGGAGA GGGCCAGAGG GGGAGGATGG ACCGGGGGAA CTCCCTGCCC TGTGTGCTGG
1081AGCAGAAGAT CTATCCCTAT GAAATGCTAG TGGTGACCAA CAAGGGGCGA ACCAAGCTGC
1141CACCGGGGGT GGATCGGATG CGGCTTGAGA GGCATCTGTC TGCCGAGGAC TTCTCAAGGG
1201TATTTGCCAT GTCCCCTGAA GAGTTTGGCA AGCTGGCTCT GTGGAAGCGG AATGAGCTCA
1261AGAAGAAGGC CTCTCTCTTC TGTCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
1321attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)