Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00507
- Subject:
- XR_002956611.1
- Aligned Length:
- 2587
- Identities:
- 1170
- Gaps:
- 1417
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGAGGTGGAGAGGAGATGCGCCGAGGGATGGAGGTGTATGTCACCGAGGAGGCTGCTGCGCTCCTGCCCCACG 74
Query 1 ------------------------------------------------------ATGGAACGGCTGCAGAAGCA 20
||||||||||||||||||||
Sbjct 75 CCCTGGGCCCTTGAAGGGCTCTGCGAGTGACCCGGCGGGCGAGCTCCGTGCTGCATGGAACGGCTGCAGAAGCA 148
Query 21 ACCACTTACCTCCCCCGGGAGCGTGAGCCCCTCCCGAGATTCCAGTGTGCCTGGCTCTCCCTCCAGCATCGTGG 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACCACTTACCTCCCCCGGGAGCGTGAGCCCCTCCCGAGATTCCAGTGTGCCTGGCTCTCCCTCCAGCATCGTGG 222
Query 95 CCAAGATGGACAATCAGGTGCTGGGCTACAAGGACCTGGCTGCCATCCCCAAGGACAAGGCCATCCTGGACATC 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCAAGATGGACAATCAGGTGCTGGGCTACAAGGACCTGGCTGCCATCCCCAAGGACAAGGCCATCCTGGACATC 296
Query 169 GAGCGGCCCGACCTCATGATCTACGAGCCTCACTTCACTTATTCCCTCCTGGAACACGTGGAGCTGCCTCGCAG 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAGCGGCCCGACCTCATGATCTACGAGCCTCACTTCACTTATTCCCTCCTGGAACACGTGGAGCTGCCTCGCAG 370
Query 243 CCGCGAGCGCTCGCTGTCACCCAAATCCACATCCCCCCCACCATCCCCAGAGGTGTGGGCGGACAGCCGGTCGC 316
|||| |||||||||||||||||||||||||
Sbjct 371 CCGC---------------------------------------------GAGGTGTGGGCGGACAGCCGGTCGC 399
Query 317 CTGGAATCATCTCTCAGGCCTCGGCCCCCAGAACCACTGGAACCCCCCGGACCAGCCTGCCCCATTTCCACCAC 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 400 CTGGAATCATCTCTCAGGCCTCGGCCCCCAGAACCACTGGAACCCCCCGGACCAGCCTGCCCCATTTCCACCAC 473
Query 391 CCTGAGACCTCCCGCCCAGATTCCAACATCTACAAGAAGCCTCCCATCTATAAGCAGAGAGAGTCCGTGGGAGG 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 CCTGAGACCTCCCGCCCAGATTCCAACATCTACAAGAAGCCTCCCATCTATAAGCAGAGAGAGTCCGTGGGAGG 547
Query 465 CAGCCCTCAGACCAAGCACCTCATCGAGGATCTCATCATCGAGTCATCCAAGTTTCCTGCAGCCCAGCCCCCAG 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 548 CAGCCCTCAGACCAAGCACCTCATCGAGGATCTCATCATCGAGTCATCCAAGTTTCCTGCAGCCCAGCCCCCAG 621
Query 539 ACCCCAACCAGCCAGCCAAAATCGAAACCGACTACTGGCCATGCCCCCCGTCTCTGGCTGTTGTGGAGACAGAA 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 622 ACCCCAACCAGCCAGCCAAAATCGAAACCGACTACTGGCCATGCCCCCCGTCTCTGGCTGTTGTGGAGACAGAA 695
Query 613 TGGAGGAAGCGGAAGGCGTCTCGGAGGGGAGCAGAGGAAGAGGAGGAGGAGGAAGATGACGACTCTGGAGAGGA 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 696 TGGAGGAAGCGGAAGGCGTCTCGGAGGGGAGCAGAGGAAGAGGAGGAGGAGGAAGATGACGACTCTGGAGAGGA 769
Query 687 GATGAAGGCTCTCAGGGAGCGTCAGAGAGAGGAACTCAGTAAGGTTACTTCCAACTTGGGAAAGATGATCTTGA 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 770 GATGAAGGCTCTCAGGGAGCGTCAGAGAGAGGAACTCAGTAAGGTTACTTCCAACTTGGGAAAGATGATCTTGA 843
Query 761 AAGAAGAGATGGAAAAGTCATTGCCGATCCGAAGGAAAACCCGCTCTCTGCCTGACCGGACACCCTTCCATACC 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 844 AAGAAGAGATGGAAAAGTCATTGCCGATCCGAAGGAAAACCCGCTCTCTGCCTGACCGGACACCCTTCCATACC 917
Query 835 TCCTTGCACCAGGGAACGTCTAAATCTTCCTCTCTCCCCGCCTATGGCAGGACCACCCTGAGCCGGCTACAGTC 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 918 TCCTTGCACCAGGGAACGTCTAAATCTTCCTCTCTCCCCGCCTATGGCAGGACCACCCTGAGCCGGCTACAGTC 991
Query 909 CACAGAGTTCAGCCCATCAGGGAGTGAGACTGGAAGCCCAGGCCTG---------------------------- 954
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 992 CACAGAGTTCAGCCCATCAGGGAGTGAGACTGGAAGCCCAGGCCTGCAGGTGAGTGCCTCCTGGAGGGGAACAG 1065
Query 955 -------------------------------------------------------------------------- 954
Sbjct 1066 GCAGAGCAGCAGAAGCTGGGTCCTGGCACCCGAAAGTGTCAGGGGAAGGGGGGTGTGGGGCCACAGAGTTGCCT 1139
Query 955 -------------------------------------------------------------------------- 954
Sbjct 1140 GGTGAAGAAGAAGAAGCCGGGGTAAGGCTGGGAAGGTCTCCCTGCCCCGCTCTGGCTCACTGCGGCTTTGGTCT 1213
Query 955 ---CAGAACGGAGAGGGCCAGAGGGGGAGGATGGACCGGGGGAACTCCCTGCCCTGTGTGCTGGAGCAGAAGAT 1025
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1214 CCCCAGAACGGAGAGGGCCAGAGGGGGAGGATGGACCGGGGGAACTCCCTGCCCTGTGTGCTGGAGCAGAAGAT 1287
Query 1026 CTATCCCTATGAAATGCTAGTGGTGACCAACAAGGGGCGAACCAAGCTGCCACCGGGGGTGGATCGGATGCGGC 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1288 CTATCCCTATGAAATGCTAGTGGTGACCAACAAGGGGCGAACCAAGCTGCCACCGGGGGTGGATCGGATGCGGC 1361
Query 1100 TTGAGAGGCATCTGTCTGCCGAGGACTTCTCAAGGGTATTTGCCATGTCCCCTGAAGAGTTTGGCAAGCTGGCT 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1362 TTGAGAGGCATCTGTCTGCCGAGGACTTCTCAAGGGTATTTGCCATGTCCCCTGAAGAGTTTGGCAAGCTGGCT 1435
Query 1174 CTGTGGAAGCGGAATGAGCTCAAGAAGAAGGCCTCTCTCTTC-------------------------------- 1215
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1436 CTGTGGAAGCGGAATGAGCTCAAGAAGAAGGCCTCTCTCTTCTGATGGCCCCCACCTGCTCCGGGACGGCCCCC 1509
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 1510 TTACCCCTGCTGCTTCAGGGTTTTTCCCCGGCGGGTTGGGAGGGGCAGGAGGTGGGGTGGAAATAGGGTGGGCT 1583
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 1584 CCTTTCCTCAGGTAGAGTGGGGGGCCAAAACCTCTGCAGTCCCCGGCAGTGAGCTATGGACTTTCTTCCCCCTC 1657
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 1658 ACAAGGCTGGGGGCCTCCTGCTCTCGTCCCTGGCCCTCCCTGCACAGGGCAAAGCCAGTCTGGGCTCTGGCACA 1731
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 1732 CAGAGTTCATGTTTGCGCCCTCTCCCTGCCCCTCACCCCAGAGGGTGAGGAGGAATGAGGGGCATTGGTGGTTA 1805
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 1806 GGCCGGTTGGCTGTCTTGAACAGCTGGAGGGAAGATGCAGGGGTGGGAAGCGGCCAGGCAGAAAGAGCTCCAGG 1879
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 1880 CTCTTGTGTCGCCCACCCAGCCCTCCCATACTCACTCCTGACAGCTTTCCTGCACTGCAGCCTCCTGCTCCTCT 1953
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 1954 GACTCTAGTGGGAACAGGCCCCAGCTCAGCCTCCGGCAGGGAGGTCACCCCTCCACTTCAGCTTGCCCTGACCT 2027
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2028 CCGCTCGCAAACCCCGAGCTTCCAAGCCTTTTGCTCCAGCCCTGCGGCTTCCCCAGAAGCCTGGGCTTAGGGTG 2101
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2102 GAGATGCCGCCTACACACGATCCTGGCCCTCCACCTGCCTCCAGGCCACGAAATGGGAATTCCAGCACTAAGCC 2175
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2176 AGGCACCGGGCAGAAGCTGGGCCTTCCGCCTCCCTTGGATGGGGTCAAGAGGCCAGGCCTGGCACATTTTGGAG 2249
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2250 TGTCCTGGCTACCAGCTCTCACCTACACCCACGCACCCCCCCACACACTATGCTCTCTCAAGAATGTAATTTAT 2323
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2324 TGGGGCCCCCCCAGCTGCTTTCCTCACCTGCCCCTGCCCTACCTTACACCCCCAGCTTGACTTCTTTCCAGTCC 2397
Query 1216 -------------------------------------------------------------------------- 1215
Sbjct 2398 ACGTGTGTATATAATGATATCTATATTTTTGCCCAGGTCTGGGTATTGCTCCTGCCCAGACCCTGACATCCCTT 2471
Query 1216 ----------------------------------------------------------------------- 1215
Sbjct 2472 TCCACTGTGTGTGTGACCATGCTGGGGGAGGGGGACTCTGCTTGGAATTAAAAGGTTGCATTGGGTCCCTA 2542
